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The map label for this gene is lpqB

Identifier: 121639133

GI number: 121639133

Start: 3575642

End: 3577393

Strand: Reverse

Name: lpqB

Synonym: BCG_3273c

Alternate gene names: 121639133

Gene position: 3577393-3575642 (Counterclockwise)

Preceding gene: 121639134

Following gene: 121639132

Centisome position: 81.78

GC content: 67.41

Gene sequence:

>1752_bases
ATGCGGCTGACAATTTTGTTGTTCCTTGGTGCAGTGCTGGCCGGCTGTGCCAGTGTGCCCAGCACGTCGGCCCCGCAAGC
CATCGGAACCGTCGAACGTCCGGTGCCGTCGAATCTGCCCAAACCGAGCCCGGGTATGGATCCCGACGTGCTGTTACGCG
AGTTCCTCAAGGCCACAGCCGACCCGGCCAACCGGCACCTAGCGGCGCGTCAGTTCCTCACCGAATCGGCTTCCAACGCC
TGGGACGACGCCGGCAGCGCGTTGTTGATCGACCACGTGGTGTTCGTCGAAACCCGAAGCGCCGAGAAGGTTTCGGTAAC
CATGCGGGCAGACATTCTCGGCTCGCTCTCGGATGTGGGGGTGTTTGAGACCGCCGAGGGTCAACTGCCGGATCCGGGCC
CGATCGAGTTGGTCAAGACGTCCGGTGGTTGGCGCATCGATCGCCTACCCAACGGGGTTTTCCTGGACTGGCAGCAGTTC
CAAGAAACGTACAAGCGCAACACCCTGTACTTCGCCGACCCCACCGGCAAGACCGTGGTTCCCGATCCGCGCTACGTCGC
TGTGTCCGACCGCGACCAGCTGGCCACGGAGCTCGTCTCCAAACTGCTGGCGGGTCCACGCCCGGAGATGGCGCGCACGG
TGCGTAATCTGCTCGCTCCGCCGCTACGACTGCGCGGGCCGGTGACTCGGGCCGACGGCGGAAAGAGCGGAATCGGCCGC
GGGTACGGCGGCGCGCGAGTCGACATGGAGAAGCTGTCCACCACCGATCCGCACAGCAGGCAATTACTTGCCGCACAGAT
CATCTGGACCTTGGCCAGGGCCGACATCAGGGGGCCGTACGTGATCAACGCCGACGGCGCCCCGCTGGAAGACAGGTTTG
CCGAGGGGTGGACCACTTCCGATGTCGCGGCCACCGACCCGGGGGTGGCCGACGGTGCCGCCGCGGGGTTGCACGCCTTG
GTGAACGGATCACTGGTGGCGATGGACGCACAGCGAGTCACCCCCGTGCCCGGGGCCTTCGGACGGATGCCGGAGCAGAC
GGCGGCCGCCGTATCACGCAGCGGGCGTCAGGTGGCCTCGGTGGTGACGCTGGGGCGCGGGGCTCCGGATGAGGCGGCGT
CTTTGTGGGTCGGCGACCTCGGCGGCGAGGCGGTGCAGTCCGCCGACGGGCACAGCCTGTTGCGGCCCAGCTGGTCGCTG
GACGACGCGGTCTGGGTGGTGGTCGATACCAACGTCGTGCTGCGAGCGATACAGGACCCGGCATCGGGGCAACCCGCGCG
GATTCCGGTGGATTCGACCGCGGTGGCCAGCCGCTTCCCGGGGGCGATCAACGATCTTCAACTGTCCCGTGACGGGACGC
GCGCCGCGATGGTGATCGGTGGGCAGGTGATCCTCGCCGGCGTCGAGCAGACCCAGGCTGGCCAGTTCGCCCTGACCTAC
CCTCGGCGGCTGGGTTTCGGGCTGGGTTCCTCGGTGGTGTCGTTGTCCTGGCGAACCGGTGACGACATCGTGGTGACACG
CACCGACGCCGCCCATCCGGTGTCTTATGTAAACCTCGACGGGGTGAACTCCGACGCGCCGTCCCGCGGGTTGCAAACTC
CACTGACGGCGATCGCGGCCAACCCGTCGACTGTGTATGTCGCCGGCCCGCAAGGGGTGTTGATGTACTCGGCGTCTGTC
GAAAGCCGACCAGGCTGGGCGGACGTACCGGGGCTGATGGTGCCGGGGGCGGCGCCGGTATTGCCCGGATGA

Upstream 100 bases:

>100_bases
AGCCAGTTCTGCAACCGGTCGCGCAACCGAATCCGCAACCGATGCCACCGGAATACAAGGAACGTCAGCGCCCACGTGAG
CACGCGGAGTGGAGCGGTTG

Downstream 100 bases:

>100_bases
GTGCTGTGCCTGCGTTTTTCGCGACCTGAGCACACCGGCTACCCTCGCAGTGAGGAGGCGCTTGTTGATGTCGCCAAGAG
TTCCCCGGCTGCGTTGGGAT

Product: lipoprotein LpqB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 583; Mature: 583

Protein sequence:

>583_residues
MRLTILLFLGAVLAGCASVPSTSAPQAIGTVERPVPSNLPKPSPGMDPDVLLREFLKATADPANRHLAARQFLTESASNA
WDDAGSALLIDHVVFVETRSAEKVSVTMRADILGSLSDVGVFETAEGQLPDPGPIELVKTSGGWRIDRLPNGVFLDWQQF
QETYKRNTLYFADPTGKTVVPDPRYVAVSDRDQLATELVSKLLAGPRPEMARTVRNLLAPPLRLRGPVTRADGGKSGIGR
GYGGARVDMEKLSTTDPHSRQLLAAQIIWTLARADIRGPYVINADGAPLEDRFAEGWTTSDVAATDPGVADGAAAGLHAL
VNGSLVAMDAQRVTPVPGAFGRMPEQTAAAVSRSGRQVASVVTLGRGAPDEAASLWVGDLGGEAVQSADGHSLLRPSWSL
DDAVWVVVDTNVVLRAIQDPASGQPARIPVDSTAVASRFPGAINDLQLSRDGTRAAMVIGGQVILAGVEQTQAGQFALTY
PRRLGFGLGSSVVSLSWRTGDDIVVTRTDAAHPVSYVNLDGVNSDAPSRGLQTPLTAIAANPSTVYVAGPQGVLMYSASV
ESRPGWADVPGLMVPGAAPVLPG

Sequences:

>Translated_583_residues
MRLTILLFLGAVLAGCASVPSTSAPQAIGTVERPVPSNLPKPSPGMDPDVLLREFLKATADPANRHLAARQFLTESASNA
WDDAGSALLIDHVVFVETRSAEKVSVTMRADILGSLSDVGVFETAEGQLPDPGPIELVKTSGGWRIDRLPNGVFLDWQQF
QETYKRNTLYFADPTGKTVVPDPRYVAVSDRDQLATELVSKLLAGPRPEMARTVRNLLAPPLRLRGPVTRADGGKSGIGR
GYGGARVDMEKLSTTDPHSRQLLAAQIIWTLARADIRGPYVINADGAPLEDRFAEGWTTSDVAATDPGVADGAAAGLHAL
VNGSLVAMDAQRVTPVPGAFGRMPEQTAAAVSRSGRQVASVVTLGRGAPDEAASLWVGDLGGEAVQSADGHSLLRPSWSL
DDAVWVVVDTNVVLRAIQDPASGQPARIPVDSTAVASRFPGAINDLQLSRDGTRAAMVIGGQVILAGVEQTQAGQFALTY
PRRLGFGLGSSVVSLSWRTGDDIVVTRTDAAHPVSYVNLDGVNSDAPSRGLQTPLTAIAANPSTVYVAGPQGVLMYSASV
ESRPGWADVPGLMVPGAAPVLPG
>Mature_583_residues
MRLTILLFLGAVLAGCASVPSTSAPQAIGTVERPVPSNLPKPSPGMDPDVLLREFLKATADPANRHLAARQFLTESASNA
WDDAGSALLIDHVVFVETRSAEKVSVTMRADILGSLSDVGVFETAEGQLPDPGPIELVKTSGGWRIDRLPNGVFLDWQQF
QETYKRNTLYFADPTGKTVVPDPRYVAVSDRDQLATELVSKLLAGPRPEMARTVRNLLAPPLRLRGPVTRADGGKSGIGR
GYGGARVDMEKLSTTDPHSRQLLAAQIIWTLARADIRGPYVINADGAPLEDRFAEGWTTSDVAATDPGVADGAAAGLHAL
VNGSLVAMDAQRVTPVPGAFGRMPEQTAAAVSRSGRQVASVVTLGRGAPDEAASLWVGDLGGEAVQSADGHSLLRPSWSL
DDAVWVVVDTNVVLRAIQDPASGQPARIPVDSTAVASRFPGAINDLQLSRDGTRAAMVIGGQVILAGVEQTQAGQFALTY
PRRLGFGLGSSVVSLSWRTGDDIVVTRTDAAHPVSYVNLDGVNSDAPSRGLQTPLTAIAANPSTVYVAGPQGVLMYSASV
ESRPGWADVPGLMVPGAAPVLPG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lpqB lipoprotein family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): LPQB_MYCBO (Q7TWW9)

Other databases:

- EMBL:   BX248345
- RefSeq:   NP_856917.1
- EnsemblBacteria:   EBMYCT00000017080
- GeneID:   1093982
- GenomeReviews:   BX248333_GR
- KEGG:   mbo:Mb3272c
- GeneTree:   EBGT00050000017181
- HOGENOM:   HBG565340
- ProtClustDB:   PRK13616
- BioCyc:   MBOV233413:MB3272C-MONOMER
- HAMAP:   MF_01373
- InterPro:   IPR019606
- InterPro:   IPR018910
- SMART:   SM00909

Pfam domain/function: PF10646 Germane; PF10647 Gmad1

EC number: NA

Molecular weight: Translated: 61120; Mature: 61120

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTILLFLGAVLAGCASVPSTSAPQAIGTVERPVPSNLPKPSPGMDPDVLLREFLKATA
CEEEHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
DPANRHLAARQFLTESASNAWDDAGSALLIDHVVFVETRSAEKVSVTMRADILGSLSDVG
CHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEECCCCEEEEEEEHHHHHCHHHCC
VFETAEGQLPDPGPIELVKTSGGWRIDRLPNGVFLDWQQFQETYKRNTLYFADPTGKTVV
EEECCCCCCCCCCCEEEEECCCCEEEECCCCCEEECHHHHHHHHHCCEEEEECCCCCEEC
PDPRYVAVSDRDQLATELVSKLLAGPRPEMARTVRNLLAPPLRLRGPVTRADGGKSGIGR
CCCCEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCC
GYGGARVDMEKLSTTDPHSRQLLAAQIIWTLARADIRGPYVINADGAPLEDRFAEGWTTS
CCCCCEEEHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHCCCCCC
DVAATDPGVADGAAAGLHALVNGSLVAMDAQRVTPVPGAFGRMPEQTAAAVSRSGRQVAS
CCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCHHCCCCHHHHHHHHHCCHHEEH
VVTLGRGAPDEAASLWVGDLGGEAVQSADGHSLLRPSWSLDDAVWVVVDTNVVLRAIQDP
HHHHCCCCCCHHHEEEEECCCCHHHHCCCCCCEECCCCCCCCEEEEEEECHHHHHHHCCC
ASGQPARIPVDSTAVASRFPGAINDLQLSRDGTRAAMVIGGQVILAGVEQTQAGQFALTY
CCCCCCCCCCCCHHHHHHCCCCCCCEEECCCCCEEEEEECCEEEEEECCCCCCCCEEEEC
PRRLGFGLGSSVVSLSWRTGDDIVVTRTDAAHPVSYVNLDGVNSDAPSRGLQTPLTAIAA
HHHHCCCCCCCEEEEEEECCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCHHHEEC
NPSTVYVAGPQGVLMYSASVESRPGWADVPGLMVPGAAPVLPG
CCCEEEEECCCEEEEEEECCCCCCCCCCCCCEECCCCCCCCCC
>Mature Secondary Structure
MRLTILLFLGAVLAGCASVPSTSAPQAIGTVERPVPSNLPKPSPGMDPDVLLREFLKATA
CEEEHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
DPANRHLAARQFLTESASNAWDDAGSALLIDHVVFVETRSAEKVSVTMRADILGSLSDVG
CHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEECCCCEEEEEEEHHHHHCHHHCC
VFETAEGQLPDPGPIELVKTSGGWRIDRLPNGVFLDWQQFQETYKRNTLYFADPTGKTVV
EEECCCCCCCCCCCEEEEECCCCEEEECCCCCEEECHHHHHHHHHCCEEEEECCCCCEEC
PDPRYVAVSDRDQLATELVSKLLAGPRPEMARTVRNLLAPPLRLRGPVTRADGGKSGIGR
CCCCEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCC
GYGGARVDMEKLSTTDPHSRQLLAAQIIWTLARADIRGPYVINADGAPLEDRFAEGWTTS
CCCCCEEEHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHCCCCCC
DVAATDPGVADGAAAGLHALVNGSLVAMDAQRVTPVPGAFGRMPEQTAAAVSRSGRQVAS
CCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCHHCCCCHHHHHHHHHCCHHEEH
VVTLGRGAPDEAASLWVGDLGGEAVQSADGHSLLRPSWSLDDAVWVVVDTNVVLRAIQDP
HHHHCCCCCCHHHEEEEECCCCHHHHCCCCCCEECCCCCCCCEEEEEEECHHHHHHHCCC
ASGQPARIPVDSTAVASRFPGAINDLQLSRDGTRAAMVIGGQVILAGVEQTQAGQFALTY
CCCCCCCCCCCCHHHHHHCCCCCCCEEECCCCCEEEEEECCEEEEEECCCCCCCCEEEEC
PRRLGFGLGSSVVSLSWRTGDDIVVTRTDAAHPVSYVNLDGVNSDAPSRGLQTPLTAIAA
HHHHCCCCCCCEEEEEEECCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCHHHEEC
NPSTVYVAGPQGVLMYSASVESRPGWADVPGLMVPGAAPVLPG
CCCEEEEECCCEEEEEEECCCCCCCCCCCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12788972