| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121639093
Identifier: 121639093
GI number: 121639093
Start: 3536282
End: 3537139
Strand: Reverse
Name: 121639093
Synonym: BCG_3233c
Alternate gene names: NA
Gene position: 3537139-3536282 (Counterclockwise)
Preceding gene: 121639095
Following gene: 121639092
Centisome position: 80.86
GC content: 62.35
Gene sequence:
>858_bases GTGTCCACGTACGGCTGGCGCGCCTACGCCCTGCCGGTTCTGATGGTGCTGACCACGGTGGTGGTGTACCAGACGGTGAC CGGGACGAGCACGCCAAGGCCCGCGGCGGCCCAGACCGTCCGGGACTCGCCGGCCATTGGTGTGGTGGGGACCGCGATCC TCGACGCACCGCCTCGCGGTCTTGCAGTGTTCGATGCCAATCTGCCGGCCGGGACGCTGCCGGATGGCGGCCCGTTCACC GAGGCTGGTGACAAGACCTGGCGTGTCGTTCCGGGCACTACTCCCCAGGTCGGTCAAGGCACCGTCAAAGTGTTCAGGTA TACCGTCGAGATCGAGAACGGTCTTGATCCCACAATGTACGGCGGTGACAACGCATTCGCCCAGATGGTCGACCAGACGT TGACCAATCCCAAGGGCTGGACCCACAATCCGCAATTCGCGTTCGTGCGGATCGACAGCGGAAAACCCAACTTCCGGATT TCGCTGGTGTCGCCGACGACAGTGCGCGGGGGGTGTGGCTACGAATTCCGGCTCGAGACGTCCTGCTACAACCCGTCGTT CGGCGGCATGGATCGCCAATCGCGGGTGTTCATCAACGAGGCGCGCTGGGTACGCGGAGCCGTTCCATTCGAAGGTGACG TAGGTTCCTATCGGCAATATGTGATCAACCACGAGGTCGGTCATGCCATCGGTTACCTGCGCCACGAGCCGTGCGACCAA CAAGGCGGTCTGGCTCCGGTAATGATGCAGCAGACGTTTTCCACCTCCAATGACGACGCGGCCAAGTTTGACCCCGACTT CGTTAAGGCGGATGGAAAGACCTGCCGATTCAATCCCTGGCCCTACCCGATTCCCTAA
Upstream 100 bases:
>100_bases GCGGGCCCTGCGCGACCCGCTCGCCGCGACTGACAGACGGGTCCGGGCCCGCCGCGACCGGAAGCGTCAATGGCGCAAAC AAACCTGGTTGGGGCGGTTC
Downstream 100 bases:
>100_bases CCCGGGGAAGCAAAGGTGGCAAGCTGGGCGTTGAGGTATTTGCAGGACGACGCGCAGCAGACGTTTCGGATATAACCGAG GAGATATTCGGTGTCGACAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MSTYGWRAYALPVLMVLTTVVVYQTVTGTSTPRPAAAQTVRDSPAIGVVGTAILDAPPRGLAVFDANLPAGTLPDGGPFT EAGDKTWRVVPGTTPQVGQGTVKVFRYTVEIENGLDPTMYGGDNAFAQMVDQTLTNPKGWTHNPQFAFVRIDSGKPNFRI SLVSPTTVRGGCGYEFRLETSCYNPSFGGMDRQSRVFINEARWVRGAVPFEGDVGSYRQYVINHEVGHAIGYLRHEPCDQ QGGLAPVMMQQTFSTSNDDAAKFDPDFVKADGKTCRFNPWPYPIP
Sequences:
>Translated_285_residues MSTYGWRAYALPVLMVLTTVVVYQTVTGTSTPRPAAAQTVRDSPAIGVVGTAILDAPPRGLAVFDANLPAGTLPDGGPFT EAGDKTWRVVPGTTPQVGQGTVKVFRYTVEIENGLDPTMYGGDNAFAQMVDQTLTNPKGWTHNPQFAFVRIDSGKPNFRI SLVSPTTVRGGCGYEFRLETSCYNPSFGGMDRQSRVFINEARWVRGAVPFEGDVGSYRQYVINHEVGHAIGYLRHEPCDQ QGGLAPVMMQQTFSTSNDDAAKFDPDFVKADGKTCRFNPWPYPIP >Mature_284_residues STYGWRAYALPVLMVLTTVVVYQTVTGTSTPRPAAAQTVRDSPAIGVVGTAILDAPPRGLAVFDANLPAGTLPDGGPFTE AGDKTWRVVPGTTPQVGQGTVKVFRYTVEIENGLDPTMYGGDNAFAQMVDQTLTNPKGWTHNPQFAFVRIDSGKPNFRIS LVSPTTVRGGCGYEFRLETSCYNPSFGGMDRQSRVFINEARWVRGAVPFEGDVGSYRQYVINHEVGHAIGYLRHEPCDQQ GGLAPVMMQQTFSTSNDDAAKFDPDFVKADGKTCRFNPWPYPIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31065; Mature: 30934
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTYGWRAYALPVLMVLTTVVVYQTVTGTSTPRPAAAQTVRDSPAIGVVGTAILDAPPRG CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCEEEEHHHHCCCCCC LAVFDANLPAGTLPDGGPFTEAGDKTWRVVPGTTPQVGQGTVKVFRYTVEIENGLDPTMY EEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEEEEEECCCCCCCEE GGDNAFAQMVDQTLTNPKGWTHNPQFAFVRIDSGKPNFRISLVSPTTVRGGCGYEFRLET CCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCEECCCCCEEEEEEC SCYNPSFGGMDRQSRVFINEARWVRGAVPFEGDVGSYRQYVINHEVGHAIGYLRHEPCDQ CCCCCCCCCCCCCCEEEEECCCEEECCCCCCCCCCCHHHEECCCHHHHHHHHHHCCCCCC QGGLAPVMMQQTFSTSNDDAAKFDPDFVKADGKTCRFNPWPYPIP CCCCCHHHHHHHCCCCCCCCCCCCCCCEECCCCEEEECCCCCCCC >Mature Secondary Structure STYGWRAYALPVLMVLTTVVVYQTVTGTSTPRPAAAQTVRDSPAIGVVGTAILDAPPRG CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCEEEEHHHHCCCCCC LAVFDANLPAGTLPDGGPFTEAGDKTWRVVPGTTPQVGQGTVKVFRYTVEIENGLDPTMY EEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEEEEEECCCCCCCEE GGDNAFAQMVDQTLTNPKGWTHNPQFAFVRIDSGKPNFRISLVSPTTVRGGCGYEFRLET CCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCEECCCCCEEEEEEC SCYNPSFGGMDRQSRVFINEARWVRGAVPFEGDVGSYRQYVINHEVGHAIGYLRHEPCDQ CCCCCCCCCCCCCCEEEEECCCEEECCCCCCCCCCCHHHEECCCHHHHHHHHHHCCCCCC QGGLAPVMMQQTFSTSNDDAAKFDPDFVKADGKTCRFNPWPYPIP CCCCCHHHHHHHCCCCCCCCCCCCCCCEECCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA