| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is devS [H]
Identifier: 121639015
GI number: 121639015
Start: 3449239
End: 3450975
Strand: Reverse
Name: devS [H]
Synonym: BCG_3155c
Alternate gene names: 121639015
Gene position: 3450975-3449239 (Counterclockwise)
Preceding gene: 121639016
Following gene: 121639013
Centisome position: 78.89
GC content: 64.02
Gene sequence:
>1737_bases ATGACAACAGGGGGCCTCGTCGACGAAAACGACGGCGCCGCAATGCGTCCACTGCGTCACACGCTCTCCCAACTACGCCT GCACGAGCTGCTGGTCGAGGTGCAGGACCGGGTCGAGCAGATCGTCGAGGGCCGGGACCGCCTCGATGGTCTGGTGGAGG CCATGCTCGTGGTCACAGCGGGCCTGGACCTGGAGGCAACCCTACGCGCTATCGTGCATTCAGCGACCAGCCTTGTCGAT GCGCGCTATGGCGCTATGGAGGTGCACGACCGGCAGCATCGGGTATTGCACTTTGTCTATGAAGGCATCGACGAGGAGAC CGTTCGGCGGATCGGCCACCTACCGAAAGGCCTAGGCGTCATCGGGCTGCTCATCGAAGATCCCAAACCGTTACGGCTGG ACGATGTTTCTGCGCACCCGGCCTCGATTGGTTTTCCGCCGTATCATCCGCCGATGCGTACCTTCCTCGGGGTACCGGTT CGGGTGCGCGATGAATCGTTCGGCACTCTGTACCTGACTGACAAGACCAACGGGCAACCGTTCAGCGACGACGACGAGGT TCTGGTCCAGGCGCTGGCGGCCGCCGCGGGTATCGCAGTCGCGAATGCCCGGCTCTACCAGCAGGCTAAGGCGCGTCAGT CGTGGATCGAGGCCACCCGTGACATCGCCACCGAGTTGTTGTCCGGCACCGAACCCGCGACGGTGTTCCGGCTTGTCGCC GCGGAGGCGCTCAAGCTGACGGCGGCTGACGCTGCCCTGGTAGCCGTTCCCGTCGACGAGGACATGCCTGCCGCTGACGT GGGGGAGCTGCTGGTGATTGAAACAGTCGGCAGCGCTGTGGCTTCCACTGTTGGGCGAACGATTCCGGTGGCGGGCGCGG TGCTGCGGGAGGTCTTCGTCAACGGCATTCCGCGACGGGTCGACCGGGTCGATTTGGAAGGCCTGGACGAACTGGCCGAC GCAGGTCCGGCGCTGCTGTTGCCGCTGCGGGCCAGAGGTACCGTAGCGGGTGTCGTTGTTGTGCTGAGTCAAGGCGGTCC AGGGGCTTTCACCGACGAACAACTCGAGATGATGGCCGCGTTCGCCGACCAGGCCGCGCTGGCTTGGCAATTGGCCACTT CGCAACGTCGGATGCGCGAACTCGACGTACTGACCGACCGGGATCGTATCGCCCGTGACCTCCATGACCATGTCATCCAG CGGCTCTTCGCGATTGGCCTGGCTTTGCAGGGTGCTGTCCCGCACGAACGTAATCCTGAAGTGCAGCAACGACTCTCGGA CGTGGTAGACGATCTGCAAGACGTTATACAGGAAATCCGGACCACCATTTATGACCTGCACGGAGCATCGCAGGGTATCA CTCGGCTCCGGCAGCGAATCGATGCGGCCGTAGCCCAATTTGCCGACTCGGGGTTGCGCACCAGCGTTCAATTCGTGGGT CCATTGTCGGTGGTCGACAGCGCGCTCGCCGATCAGGCCGAGGCGGTGGTTCGGGAAGCGGTCAGCAACGCGGTTCGCCA TGCGAAGGCCAGCACGTTGACCGTCCGGGTCAAAGTCGACGACGACTTGTGCATCGAGGTGACCGACAACGGCCGCGGGC TGCCCGACGAGTTCACCGGAAGCGGCTTAACGAACCTGCGGCAGCGGGCAGAGCAGGCCGGCGGCGAATTCACCCTCGCG AGCGTACCGGGCGCGAGCGGAACAGTGCTGCGATGGTCAGCACCGTTGTCGCAGTAG
Upstream 100 bases:
>100_bases ACGTGTCGCGGTTGCTGGCCAAGCTGGGCATGGAACGTCGGACGCAAGCCGCGGTATTCGCGACGGAGTTGAAGCGCTCG CGGCCACCCGGTGATGGACC
Downstream 100 bases:
>100_bases CTCTTCCGGCCACTCAACGACCTGGGACAGTTCGCGCCGTGGCGTCGGTGGCAACGGGTCGGCATTGATCGGTGCCCAAC CCACTCGCAGCAGCATCTGG
Product: two component sensor histidine kinase devS
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 578; Mature: 577
Protein sequence:
>578_residues MTTGGLVDENDGAAMRPLRHTLSQLRLHELLVEVQDRVEQIVEGRDRLDGLVEAMLVVTAGLDLEATLRAIVHSATSLVD ARYGAMEVHDRQHRVLHFVYEGIDEETVRRIGHLPKGLGVIGLLIEDPKPLRLDDVSAHPASIGFPPYHPPMRTFLGVPV RVRDESFGTLYLTDKTNGQPFSDDDEVLVQALAAAAGIAVANARLYQQAKARQSWIEATRDIATELLSGTEPATVFRLVA AEALKLTAADAALVAVPVDEDMPAADVGELLVIETVGSAVASTVGRTIPVAGAVLREVFVNGIPRRVDRVDLEGLDELAD AGPALLLPLRARGTVAGVVVVLSQGGPGAFTDEQLEMMAAFADQAALAWQLATSQRRMRELDVLTDRDRIARDLHDHVIQ RLFAIGLALQGAVPHERNPEVQQRLSDVVDDLQDVIQEIRTTIYDLHGASQGITRLRQRIDAAVAQFADSGLRTSVQFVG PLSVVDSALADQAEAVVREAVSNAVRHAKASTLTVRVKVDDDLCIEVTDNGRGLPDEFTGSGLTNLRQRAEQAGGEFTLA SVPGASGTVLRWSAPLSQ
Sequences:
>Translated_578_residues MTTGGLVDENDGAAMRPLRHTLSQLRLHELLVEVQDRVEQIVEGRDRLDGLVEAMLVVTAGLDLEATLRAIVHSATSLVD ARYGAMEVHDRQHRVLHFVYEGIDEETVRRIGHLPKGLGVIGLLIEDPKPLRLDDVSAHPASIGFPPYHPPMRTFLGVPV RVRDESFGTLYLTDKTNGQPFSDDDEVLVQALAAAAGIAVANARLYQQAKARQSWIEATRDIATELLSGTEPATVFRLVA AEALKLTAADAALVAVPVDEDMPAADVGELLVIETVGSAVASTVGRTIPVAGAVLREVFVNGIPRRVDRVDLEGLDELAD AGPALLLPLRARGTVAGVVVVLSQGGPGAFTDEQLEMMAAFADQAALAWQLATSQRRMRELDVLTDRDRIARDLHDHVIQ RLFAIGLALQGAVPHERNPEVQQRLSDVVDDLQDVIQEIRTTIYDLHGASQGITRLRQRIDAAVAQFADSGLRTSVQFVG PLSVVDSALADQAEAVVREAVSNAVRHAKASTLTVRVKVDDDLCIEVTDNGRGLPDEFTGSGLTNLRQRAEQAGGEFTLA SVPGASGTVLRWSAPLSQ >Mature_577_residues TTGGLVDENDGAAMRPLRHTLSQLRLHELLVEVQDRVEQIVEGRDRLDGLVEAMLVVTAGLDLEATLRAIVHSATSLVDA RYGAMEVHDRQHRVLHFVYEGIDEETVRRIGHLPKGLGVIGLLIEDPKPLRLDDVSAHPASIGFPPYHPPMRTFLGVPVR VRDESFGTLYLTDKTNGQPFSDDDEVLVQALAAAAGIAVANARLYQQAKARQSWIEATRDIATELLSGTEPATVFRLVAA EALKLTAADAALVAVPVDEDMPAADVGELLVIETVGSAVASTVGRTIPVAGAVLREVFVNGIPRRVDRVDLEGLDELADA GPALLLPLRARGTVAGVVVVLSQGGPGAFTDEQLEMMAAFADQAALAWQLATSQRRMRELDVLTDRDRIARDLHDHVIQR LFAIGLALQGAVPHERNPEVQQRLSDVVDDLQDVIQEIRTTIYDLHGASQGITRLRQRIDAAVAQFADSGLRTSVQFVGP LSVVDSALADQAEAVVREAVSNAVRHAKASTLTVRVKVDDDLCIEVTDNGRGLPDEFTGSGLTNLRQRAEQAGGEFTLAS VPGASGTVLRWSAPLSQ
Specific function: Member of the two-component regulatory system devR/devS (dosR/dosS) involved in onset of the dormancy response. May act as a redox sensor (rather than a direct hypoxia sensor); the normal (aerobic growth) state is the Fe(3+) form, while the reduced (anaer
COG id: COG2203
COG function: function code T; FOG: GAF domain
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788812, Length=208, Percent_Identity=28.3653846153846, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1787474, Length=256, Percent_Identity=27.734375, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016030 - InterPro: IPR003594 - InterPro: IPR003018 - InterPro: IPR011712 - InterPro: IPR005467 [H]
Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF07730 HisKA_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 62229; Mature: 62098
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTGGLVDENDGAAMRPLRHTLSQLRLHELLVEVQDRVEQIVEGRDRLDGLVEAMLVVTA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLDLEATLRAIVHSATSLVDARYGAMEVHDRQHRVLHFVYEGIDEETVRRIGHLPKGLGV CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCE IGLLIEDPKPLRLDDVSAHPASIGFPPYHPPMRTFLGVPVRVRDESFGTLYLTDKTNGQP EEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEECCCCCEEEEEECCCCCC FSDDDEVLVQALAAAAGIAVANARLYQQAKARQSWIEATRDIATELLSGTEPATVFRLVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH AEALKLTAADAALVAVPVDEDMPAADVGELLVIETVGSAVASTVGRTIPVAGAVLREVFV HHHHHHEECCCEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHH NGIPRRVDRVDLEGLDELADAGPALLLPLRARGTVAGVVVVLSQGGPGAFTDEQLEMMAA CCCCHHHHHCCCCCHHHHHCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCHHHHHHHHH FADQAALAWQLATSQRRMRELDVLTDRDRIARDLHDHVIQRLFAIGLALQGAVPHERNPE HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH VQQRLSDVVDDLQDVIQEIRTTIYDLHGASQGITRLRQRIDAAVAQFADSGLRTSVQFVG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHC PLSVVDSALADQAEAVVREAVSNAVRHAKASTLTVRVKVDDDLCIEVTDNGRGLPDEFTG CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCC SGLTNLRQRAEQAGGEFTLASVPGASGTVLRWSAPLSQ CCHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCC >Mature Secondary Structure TTGGLVDENDGAAMRPLRHTLSQLRLHELLVEVQDRVEQIVEGRDRLDGLVEAMLVVTA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLDLEATLRAIVHSATSLVDARYGAMEVHDRQHRVLHFVYEGIDEETVRRIGHLPKGLGV CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCE IGLLIEDPKPLRLDDVSAHPASIGFPPYHPPMRTFLGVPVRVRDESFGTLYLTDKTNGQP EEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEECCCCCEEEEEECCCCCC FSDDDEVLVQALAAAAGIAVANARLYQQAKARQSWIEATRDIATELLSGTEPATVFRLVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH AEALKLTAADAALVAVPVDEDMPAADVGELLVIETVGSAVASTVGRTIPVAGAVLREVFV HHHHHHEECCCEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHH NGIPRRVDRVDLEGLDELADAGPALLLPLRARGTVAGVVVVLSQGGPGAFTDEQLEMMAA CCCCHHHHHCCCCCHHHHHCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCHHHHHHHHH FADQAALAWQLATSQRRMRELDVLTDRDRIARDLHDHVIQRLFAIGLALQGAVPHERNPE HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH VQQRLSDVVDDLQDVIQEIRTTIYDLHGASQGITRLRQRIDAAVAQFADSGLRTSVQFVG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHC PLSVVDSALADQAEAVVREAVSNAVRHAKASTLTVRVKVDDDLCIEVTDNGRGLPDEFTG CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCC SGLTNLRQRAEQAGGEFTLASVPGASGTVLRWSAPLSQ CCHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]