| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121638959
Identifier: 121638959
GI number: 121638959
Start: 3391265
End: 3392539
Strand: Direct
Name: 121638959
Synonym: BCG_3099
Alternate gene names: NA
Gene position: 3391265-3392539 (Clockwise)
Preceding gene: 121638956
Following gene: 121638961
Centisome position: 77.52
GC content: 69.41
Gene sequence:
>1275_bases ATGTTCGAGACATTGACCGCGATCGACCCGGATGCCGAGGAAGCGGCGTTGATCGAGCGAATCGCCGAGCTGGAGCGGCT TAAGTCGGCAGCCGCGGCTGGCCAGGCGCGGGCGGCGGCCGCTGTGGACGCCGCCCGCAGAGCCGCCGAAGGAGCTGCCG GGGTGCCGGCTGCGCGCCGTGGACGTGGGCTGGCCAGTGAGATTGCCCTGGCTCGACGAGATTCACCAGCCCGGGGCAGC CGGCATCTGGGGTTTGCCAAGGCCTTGGTTTACGAGATGCCACACACGCTGGCCGCCCTGGACTGCGGCGCCCTCTCGGA GTGGCGGGCCACCCTGATCGTGCGCGAAAGCGCATGTCTGGATGTCGCGGACCGGCGCGCATTAGATGCCGAGTTATGTG GCGACCCCGGCGACTTGGAGGGGATGGGCGATGCGCGGGTGGTCGCGGCCGCCAGGGCGATCGCCTATCGGCTGGACCCG CAGGCCGTCGTCGACCGGGCGGCCAACGCCGAAAATGACCGTACGGTCACCATTCGGCCGGCACCGGACACCATGACGTA TCTGACCGCCCTGTTGCCAGTCGCCCAAGGCGTGTCGGTGTATGCGGCGCTGACCCGAGCGGCAGACACCCGCTGCGACG GGCGCTCCCGCGGCCAAGTCATGGCCGACACCCTGGTCGAACGGGTCACCGGCCGCGACGCGGCGGTCCCGACCCCGATC GCGGTCAACCTGGTCATGTCGGATGAAACGCTGCTGGGTGCGGCCAACACACCGGCGCAGCTGTGCGGCTACGGTCCCAT TCCTGCGGCCGTGGCACGGACCATGGTCGCTAGCGCCGTCACCGACCAGAGATCGCGGGCCACCCTGCGCAGGCTCTACG CTCATCCTCAGGCCGGGGCGCTGGTGTCGATGGAATCACGGGCGCGGCTGTTTCCCCGCGGTCTGGCCGCCTTCATCGAG CTGCGCGATCAGCGTTGCCGCACCCCCTACTGTGACGCGCCGATCCGACACCGCGACCATGCCCACCCCTGGGCCGACGG CGGCCCGACCAGCGCGCACAACGGGCTTGGGACCTGCGAACGCTGCAACTACGCCAAACAAGCCCCCGGCTGGCGGGTCA GCACAAGTGTCGACGAAAATCACACGCACACAGCCGAATTCATTACCCCGACAGGCAGTCGACACCGGTCCGGCGCCCCG CCGCACCTGCCTGCGGTCACCGTCAGCGAACTCGAGGTCCGAATCGGCATCGCGCTCGCTCGATACGCCGCCTAG
Upstream 100 bases:
>100_bases GCACCATTGTGCCAGCGTATAGCCGTTACCGCGGGGGCTTATCCACAGCCACCGGCGCCACCAGTTGTCCCGGTCTGTGC AGGCTGCTATTCTCGAACAC
Downstream 100 bases:
>100_bases TAGTGGTAGGTGTCAGTCGGAGCCGGCATGTGAACCGGTTCGTCCTCGAAGTCGGACACTTCGATGCCGTAGGCGCGGGC CAGATCGAGGATCTTGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: HNH Nuclease; HNH Endonuclease Domain-Containing Protein
Number of amino acids: Translated: 424; Mature: 424
Protein sequence:
>424_residues MFETLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARRGRGLASEIALARRDSPARGS RHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACLDVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDP QAVVDRAANAENDRTVTIRPAPDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPI AVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGALVSMESRARLFPRGLAAFIE LRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCERCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAP PHLPAVTVSELEVRIGIALARYAA
Sequences:
>Translated_424_residues MFETLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARRGRGLASEIALARRDSPARGS RHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACLDVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDP QAVVDRAANAENDRTVTIRPAPDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPI AVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGALVSMESRARLFPRGLAAFIE LRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCERCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAP PHLPAVTVSELEVRIGIALARYAA >Mature_424_residues MFETLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARRGRGLASEIALARRDSPARGS RHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACLDVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDP QAVVDRAANAENDRTVTIRPAPDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPI AVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGALVSMESRARLFPRGLAAFIE LRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCERCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAP PHLPAVTVSELEVRIGIALARYAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44950; Mature: 44950
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFETLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH GRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACL CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHEEEEEECCHHH DVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRP HHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEC APDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPI CCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCE AVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGA EEEEEECCCEEEECCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCE EEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH RCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPAVTVSELEVRIGIALA HCCCHHCCCCCEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHH RYAA HHCC >Mature Secondary Structure MFETLTAIDPDAEEAALIERIAELERLKSAAAAGQARAAAAVDAARRAAEGAAGVPAARR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH GRGLASEIALARRDSPARGSRHLGFAKALVYEMPHTLAALDCGALSEWRATLIVRESACL CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHEEEEEECCHHH DVADRRALDAELCGDPGDLEGMGDARVVAAARAIAYRLDPQAVVDRAANAENDRTVTIRP HHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEC APDTMTYLTALLPVAQGVSVYAALTRAADTRCDGRSRGQVMADTLVERVTGRDAAVPTPI CCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCE AVNLVMSDETLLGAANTPAQLCGYGPIPAAVARTMVASAVTDQRSRATLRRLYAHPQAGA EEEEEECCCEEEECCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LVSMESRARLFPRGLAAFIELRDQRCRTPYCDAPIRHRDHAHPWADGGPTSAHNGLGTCE EEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH RCNYAKQAPGWRVSTSVDENHTHTAEFITPTGSRHRSGAPPHLPAVTVSELEVRIGIALA HCCCHHCCCCCEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHH RYAA HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA