| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121638914
Identifier: 121638914
GI number: 121638914
Start: 3344354
End: 3345934
Strand: Direct
Name: 121638914
Synonym: BCG_3054
Alternate gene names: NA
Gene position: 3344354-3345934 (Clockwise)
Preceding gene: 121638913
Following gene: 121638915
Centisome position: 76.45
GC content: 68.69
Gene sequence:
>1581_bases TTGAACACGTCCGCAAGCCCGGTGCCCGGCCTGTTCACGCTTGTTCTGCACACTCACCTGCCCTGGCTGGCCCACCACGG GCGCTGGCCGGTCGGCGAGGAATGGCTCTATCAGTCGTGGGCGGCGGCCTACCTGCCGCTGCTGCAGGTGCTGGCCGCGC TGGCCGACGAGAACCGGCACCGGTTGATCACCCTCGGGATGACGCCGGTGGTCAACGCCCAGCTCGACGACCCATACTGC CTCAACGGTGTGCATCACTGGCTAGCCAACTGGCAGCTGCGCGCCGAAGAGGCCGCCAGCGTGCGGTATGCCCGTCAGTC GAAGTCGGCTGACTATCCGTCATGCACACCGGAGGCGTTGCGGGCCTTTGGGATTCGCGAATGTGCCGATGCAGCTCGCG CGCTCGACAACTTCGCCACGCGGTGGCGGCACGGCGGCAGCCCACTGCTGCGCGGCCTGATCGACGCCGGCACGGTGGAG CTGCTCGGTGGCCCACTTGCCCACCCGTTCCAGCCGCTGCTGGCACCGCGGCTGCGCGAGTTCGCGCTGCGCGAAGGCCT CGCCGATGCTCAGCTGCGGCTGGCGCACCGCCCGAAAGGGATCTGGGCACCCGAATGCGCATACGCCCCGGGGATGGAGG TCGACTACGCCACCGCGGGGGTCAGTCACTTCATGGTCGACGGCCCGTCGCTGCACGGCGACACCGCGCTGGGCCGGCCG GTGGGGAAAACCGATGTGGTCGCCTTCGGTCGCGACTTGCAGGTCAGCTACCGGGTGTGGTCACCGAAATCCGGCTACCC CGGGCACGCCGCCTACCGCGACTTCCACACCTACGACCACCTGACCGGACTCAAACCGGCCAGGGTCACCGGGCGTAACG TGCCGTCGGAGCAAAAGGCACCCTACGATCCCGAGCGCGCTGACCGCGCCGTCGACGTCCATGTTGCCGATTTCGTCGAC GTGGTGCGCAATCGGCTGCTCTCCGAGTCCGAGCGCATCGGCCGGCCCGCCCACGTGATCGCCGCCTTCGACACCGAGTT GTTCGGCCACTGGTGGTACGAGGGCCCAACCTGGCTGCAACGGGTATTGCGGGCTTTACCCGCCGCCGGTGTCCGGGTGG GCACCCTGAGCGATGCGATCGCCGACGGATTCGTCGGCGACCCGGTCGAATTGCCACCCAGCTCTTGGGGTTCCGGCAAG GACTGGCAGGTGTGGAGCGGTGCCAAGGTGGCCGATCTGGTCCAGCTCAACAGCGAAGTGGTCGATACCGCGTTGACCAC CATCGACAAGGCGCTGGCCCAGACAGCGTCCCTGGACGGACCGCTGCCTCGCGATCACGTTGCTGATCAGATCCTGCGCG AGACCCTGCTCACCGTGTCCAGCGACTGGCCGTTCATGGTGAGCAAGGACTCCGCCGCCGACTACGCCCGCTATCGTGCT CACCTGCACGCACACGCCACCCGGGAGATCGCCGGCGCGCTGGCCGCGGGCCGACGCGACACCGCACGGCGGCTCGCCGA AGGGTGGAACCGCGCCGACGGTCTGTTCGGCGCCCTGGACGCTCGGAGGCTGCCCAAGTGA
Upstream 100 bases:
>100_bases ACGTCGCGGCGGTCACCACCGCCGACTTCGAGATGGTGGCAGCGGGTCACGACCGTGACATCGATGACAGCCTGGATCTG ATCGCGATCGCGGTGCGGCC
Downstream 100 bases:
>100_bases ACGCCTCGCACAGGCGGAACCGGCCGCGCGCATGAGGATCCTCATGGTGTCGTGGGAGTACCCGCCGGTGGTGATCGGCG GACTCGGCCGCCACGTGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: Glycoside Hydrolase Family; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Alpha-Amylase; (1-_4)-Alpha-D-Glucan Branching; Family; Glycogen Branching; Glycosyl Transferase/Glycoside Hydrolase-Like Protein; Glycosyl Hydrolase Family Protein
Number of amino acids: Translated: 526; Mature: 526
Protein sequence:
>526_residues MNTSASPVPGLFTLVLHTHLPWLAHHGRWPVGEEWLYQSWAAAYLPLLQVLAALADENRHRLITLGMTPVVNAQLDDPYC LNGVHHWLANWQLRAEEAASVRYARQSKSADYPSCTPEALRAFGIRECADAARALDNFATRWRHGGSPLLRGLIDAGTVE LLGGPLAHPFQPLLAPRLREFALREGLADAQLRLAHRPKGIWAPECAYAPGMEVDYATAGVSHFMVDGPSLHGDTALGRP VGKTDVVAFGRDLQVSYRVWSPKSGYPGHAAYRDFHTYDHLTGLKPARVTGRNVPSEQKAPYDPERADRAVDVHVADFVD VVRNRLLSESERIGRPAHVIAAFDTELFGHWWYEGPTWLQRVLRALPAAGVRVGTLSDAIADGFVGDPVELPPSSWGSGK DWQVWSGAKVADLVQLNSEVVDTALTTIDKALAQTASLDGPLPRDHVADQILRETLLTVSSDWPFMVSKDSAADYARYRA HLHAHATREIAGALAAGRRDTARRLAEGWNRADGLFGALDARRLPK
Sequences:
>Translated_526_residues MNTSASPVPGLFTLVLHTHLPWLAHHGRWPVGEEWLYQSWAAAYLPLLQVLAALADENRHRLITLGMTPVVNAQLDDPYC LNGVHHWLANWQLRAEEAASVRYARQSKSADYPSCTPEALRAFGIRECADAARALDNFATRWRHGGSPLLRGLIDAGTVE LLGGPLAHPFQPLLAPRLREFALREGLADAQLRLAHRPKGIWAPECAYAPGMEVDYATAGVSHFMVDGPSLHGDTALGRP VGKTDVVAFGRDLQVSYRVWSPKSGYPGHAAYRDFHTYDHLTGLKPARVTGRNVPSEQKAPYDPERADRAVDVHVADFVD VVRNRLLSESERIGRPAHVIAAFDTELFGHWWYEGPTWLQRVLRALPAAGVRVGTLSDAIADGFVGDPVELPPSSWGSGK DWQVWSGAKVADLVQLNSEVVDTALTTIDKALAQTASLDGPLPRDHVADQILRETLLTVSSDWPFMVSKDSAADYARYRA HLHAHATREIAGALAAGRRDTARRLAEGWNRADGLFGALDARRLPK >Mature_526_residues MNTSASPVPGLFTLVLHTHLPWLAHHGRWPVGEEWLYQSWAAAYLPLLQVLAALADENRHRLITLGMTPVVNAQLDDPYC LNGVHHWLANWQLRAEEAASVRYARQSKSADYPSCTPEALRAFGIRECADAARALDNFATRWRHGGSPLLRGLIDAGTVE LLGGPLAHPFQPLLAPRLREFALREGLADAQLRLAHRPKGIWAPECAYAPGMEVDYATAGVSHFMVDGPSLHGDTALGRP VGKTDVVAFGRDLQVSYRVWSPKSGYPGHAAYRDFHTYDHLTGLKPARVTGRNVPSEQKAPYDPERADRAVDVHVADFVD VVRNRLLSESERIGRPAHVIAAFDTELFGHWWYEGPTWLQRVLRALPAAGVRVGTLSDAIADGFVGDPVELPPSSWGSGK DWQVWSGAKVADLVQLNSEVVDTALTTIDKALAQTASLDGPLPRDHVADQILRETLLTVSSDWPFMVSKDSAADYARYRA HLHAHATREIAGALAAGRRDTARRLAEGWNRADGLFGALDARRLPK
Specific function: Unknown
COG id: COG1543
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57816; Mature: 57816
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTSASPVPGLFTLVLHTHLPWLAHHGRWPVGEEWLYQSWAAAYLPLLQVLAALADENRH CCCCCCCCHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC RLITLGMTPVVNAQLDDPYCLNGVHHWLANWQLRAEEAASVRYARQSKSADYPSCTPEAL EEEEECCCCEECCCCCCCHHHHHHHHHHHCCEECHHHHHHHHHHHHHCCCCCCCCCHHHH RAFGIRECADAARALDNFATRWRHGGSPLLRGLIDAGTVELLGGPLAHPFQPLLAPRLRE HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHH FALREGLADAQLRLAHRPKGIWAPECAYAPGMEVDYATAGVSHFMVDGPSLHGDTALGRP HHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCHHEEECCCCCCCCCCCCCC VGKTDVVAFGRDLQVSYRVWSPKSGYPGHAAYRDFHTYDHLTGLKPARVTGRNVPSEQKA CCCCHHEEECCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC PYDPERADRAVDVHVADFVDVVRNRLLSESERIGRPAHVIAAFDTELFGHWWYEGPTWLQ CCCHHHHCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCHHHHH RVLRALPAAGVRVGTLSDAIADGFVGDPVELPPSSWGSGKDWQVWSGAKVADLVQLNSEV HHHHHCCCCCEEECHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHH VDTALTTIDKALAQTASLDGPLPRDHVADQILRETLLTVSSDWPFMVSKDSAADYARYRA HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHH HLHAHATREIAGALAAGRRDTARRLAEGWNRADGLFGALDARRLPK HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHCCHHHHHHHHCCCC >Mature Secondary Structure MNTSASPVPGLFTLVLHTHLPWLAHHGRWPVGEEWLYQSWAAAYLPLLQVLAALADENRH CCCCCCCCHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC RLITLGMTPVVNAQLDDPYCLNGVHHWLANWQLRAEEAASVRYARQSKSADYPSCTPEAL EEEEECCCCEECCCCCCCHHHHHHHHHHHCCEECHHHHHHHHHHHHHCCCCCCCCCHHHH RAFGIRECADAARALDNFATRWRHGGSPLLRGLIDAGTVELLGGPLAHPFQPLLAPRLRE HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHH FALREGLADAQLRLAHRPKGIWAPECAYAPGMEVDYATAGVSHFMVDGPSLHGDTALGRP HHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCHHEEECCCCCCCCCCCCCC VGKTDVVAFGRDLQVSYRVWSPKSGYPGHAAYRDFHTYDHLTGLKPARVTGRNVPSEQKA CCCCHHEEECCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC PYDPERADRAVDVHVADFVDVVRNRLLSESERIGRPAHVIAAFDTELFGHWWYEGPTWLQ CCCHHHHCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCHHHHH RVLRALPAAGVRVGTLSDAIADGFVGDPVELPPSSWGSGKDWQVWSGAKVADLVQLNSEV HHHHHCCCCCEEECHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHH VDTALTTIDKALAQTASLDGPLPRDHVADQILRETLLTVSSDWPFMVSKDSAADYARYRA HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHH HLHAHATREIAGALAAGRRDTARRLAEGWNRADGLFGALDARRLPK HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA