| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is gltX [H]
Identifier: 121638873
GI number: 121638873
Start: 3303292
End: 3304764
Strand: Reverse
Name: gltX [H]
Synonym: BCG_3013c
Alternate gene names: 121638873
Gene position: 3304764-3303292 (Counterclockwise)
Preceding gene: 121638874
Following gene: 121638871
Centisome position: 75.55
GC content: 66.73
Gene sequence:
>1473_bases GTGACCGCCACGGAAACAGTCCGGGTCCGATTCTGCCCTTCACCCACCGGAACTCCGCACGTCGGTCTGGTCCGCACCGC GCTGTTCAACTGGGCCTACGCCCGGCACACCGGTGGCACCTTCGTGTTCCGCATCGAGGACACCGACGCCCAACGCGACA GCGAGGAAAGCTATCTGGCGCTGCTGGACGCGCTGCGCTGGCTTGGCCTGGATTGGGATGAGGGGCCCGAGGTGGGTGGG CCGTACGGGCCGTACCGGCAGTCGCAGCGCGCCGAAATCTACCGTGACGTGCTCGCCCGACTGCTCGCCGCGGGCGAGGC CTACCACGCTTTCTCCACACCCGAGGAAGTGGAGGCCCGTCATGTCGCGGCCGGGCGCAATCCCAAGCTGGGTTACGACA ATTTCGATCGTCACTTGACCGACGCGCAGCGTGCGGCGTACCTGGCGGAGGGCCGCCAGCCGGTGGTGCGGCTGCGGATG CCCGATGACGACCTCGCTTGGAATGACCTGGTGCGCGGGCCCGTGACGTTCGCGGCTGGCTCCGTACCCGACTTCGCGTT GACCCGAGCCAGCGGTGATCCGTTATACACCTTGGTCAACCCGTGCGACGACGCGCTGATGAAGATCACCCATGTGTTGC GTGGCGAGGACCTGCTGCCGTCGACGCCGCGCCAGCTGGCGCTACATCAGGCGTTGATCAGGATCGGGGTAGCTGAGCGG ATTCCGAAATTCGCGCACCTCCCAACGGTCTTGGGGGAGGGCACCAAGAAGCTCTCGAAGCGCGATCCGCAGTCGAACCT GTTTGCCCACCGCGACCGCGGGTTCATCCCCGAAGGCCTGCTGAACTACCTCGCGTTGCTCGGCTGGTCCATAGCCGACG ACCACGACCTGTTCGGTCTCGACGAGATGGTGGCCGCGTTCGACGTTGCCGACGTCAACTCCAGCCCGGCCCGGTTCGAC CAGAAGAAGGCCGACGCGCTGAACGCCGAGCACATCCGGATGCTCGACGTGGGCGACTTCACGGTCAGGCTGCGCGACCA TCTGGATACCCACGGCCATCACATCGCGTTGGATGAGGCGGCATTCGCCGCCGCCGCCGAGTTGGTGCAGACCCGCATCG TGGTGCTCGGTGACGCGTGGGAGCTGTTGAAGTTCTTCAACGACGATCAGTATGTGATCGATCCCAAGGCCGCGGCCAAG GAGCTAGGCCCAGACGGGGCCGCGGTGCTCGACGCGGCCCTGGCCGCGCTGACAAGTGCGACGGACTGGACGGCACCCCT GATCGAGGCGGCCCTTAAGGACGCCTTGATCGAAGGTTTGGCGCTCAAACCCCGCAAGGCGTTCAGCCCCATCCGGGTGG CCGCCACCGGCACGACCGTCAGCCCGCCGTTGTTTGAATCGCTGGAGCTGCTCGGTCGTGACCGCAGCATGCAGCGGCTG CGCGCGGCGCGCCAGCTGGTCGGGCACGCGTGA
Upstream 100 bases:
>100_bases CACCCGCGGGAGTCGGTCCCATCGAGGACGGCGACACCGTCTCGATCACCATCGAGGGAATCGGCACCCTCACCAATCCC GTAGTCCGCAAAGGAAAGCC
Downstream 100 bases:
>100_bases GCCTTGTGTGGCGAATCTTTGGTAGTCTGCACGTCGGCCCATAACAGCTGGCGGCAGCGGTTTTAGGCAGCCCATGGGGT ATGGTGTAATTGGCAACACA
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS [H]
Number of amino acids: Translated: 490; Mature: 489
Protein sequence:
>490_residues MTATETVRVRFCPSPTGTPHVGLVRTALFNWAYARHTGGTFVFRIEDTDAQRDSEESYLALLDALRWLGLDWDEGPEVGG PYGPYRQSQRAEIYRDVLARLLAAGEAYHAFSTPEEVEARHVAAGRNPKLGYDNFDRHLTDAQRAAYLAEGRQPVVRLRM PDDDLAWNDLVRGPVTFAAGSVPDFALTRASGDPLYTLVNPCDDALMKITHVLRGEDLLPSTPRQLALHQALIRIGVAER IPKFAHLPTVLGEGTKKLSKRDPQSNLFAHRDRGFIPEGLLNYLALLGWSIADDHDLFGLDEMVAAFDVADVNSSPARFD QKKADALNAEHIRMLDVGDFTVRLRDHLDTHGHHIALDEAAFAAAAELVQTRIVVLGDAWELLKFFNDDQYVIDPKAAAK ELGPDGAAVLDAALAALTSATDWTAPLIEAALKDALIEGLALKPRKAFSPIRVAATGTTVSPPLFESLELLGRDRSMQRL RAARQLVGHA
Sequences:
>Translated_490_residues MTATETVRVRFCPSPTGTPHVGLVRTALFNWAYARHTGGTFVFRIEDTDAQRDSEESYLALLDALRWLGLDWDEGPEVGG PYGPYRQSQRAEIYRDVLARLLAAGEAYHAFSTPEEVEARHVAAGRNPKLGYDNFDRHLTDAQRAAYLAEGRQPVVRLRM PDDDLAWNDLVRGPVTFAAGSVPDFALTRASGDPLYTLVNPCDDALMKITHVLRGEDLLPSTPRQLALHQALIRIGVAER IPKFAHLPTVLGEGTKKLSKRDPQSNLFAHRDRGFIPEGLLNYLALLGWSIADDHDLFGLDEMVAAFDVADVNSSPARFD QKKADALNAEHIRMLDVGDFTVRLRDHLDTHGHHIALDEAAFAAAAELVQTRIVVLGDAWELLKFFNDDQYVIDPKAAAK ELGPDGAAVLDAALAALTSATDWTAPLIEAALKDALIEGLALKPRKAFSPIRVAATGTTVSPPLFESLELLGRDRSMQRL RAARQLVGHA >Mature_489_residues TATETVRVRFCPSPTGTPHVGLVRTALFNWAYARHTGGTFVFRIEDTDAQRDSEESYLALLDALRWLGLDWDEGPEVGGP YGPYRQSQRAEIYRDVLARLLAAGEAYHAFSTPEEVEARHVAAGRNPKLGYDNFDRHLTDAQRAAYLAEGRQPVVRLRMP DDDLAWNDLVRGPVTFAAGSVPDFALTRASGDPLYTLVNPCDDALMKITHVLRGEDLLPSTPRQLALHQALIRIGVAERI PKFAHLPTVLGEGTKKLSKRDPQSNLFAHRDRGFIPEGLLNYLALLGWSIADDHDLFGLDEMVAAFDVADVNSSPARFDQ KKADALNAEHIRMLDVGDFTVRLRDHLDTHGHHIALDEAAFAAAAELVQTRIVVLGDAWELLKFFNDDQYVIDPKAAAKE LGPDGAAVLDAALAALTSATDWTAPLIEAALKDALIEGLALKPRKAFSPIRVAATGTTVSPPLFESLELLGRDRSMQRLR AARQLVGHA
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) [H]
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=496, Percent_Identity=33.0645161290323, Blast_Score=201, Evalue=1e-51, Organism=Escherichia coli, GI1788743, Length=488, Percent_Identity=34.4262295081967, Blast_Score=271, Evalue=1e-73, Organism=Escherichia coli, GI226510925, Length=265, Percent_Identity=29.811320754717, Blast_Score=89, Evalue=7e-19, Organism=Caenorhabditis elegans, GI71993394, Length=495, Percent_Identity=29.4949494949495, Blast_Score=202, Evalue=3e-52, Organism=Saccharomyces cerevisiae, GI6324540, Length=505, Percent_Identity=30.4950495049505, Blast_Score=208, Evalue=2e-54, Organism=Drosophila melanogaster, GI24665321, Length=496, Percent_Identity=32.0564516129032, Blast_Score=217, Evalue=2e-56,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: =6.1.1.17 [H]
Molecular weight: Translated: 53836; Mature: 53705
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATETVRVRFCPSPTGTPHVGLVRTALFNWAYARHTGGTFVFRIEDTDAQRDSEESYLA CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHH LLDALRWLGLDWDEGPEVGGPYGPYRQSQRAEIYRDVLARLLAAGEAYHAFSTPEEVEAR HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHH HVAAGRNPKLGYDNFDRHLTDAQRAAYLAEGRQPVVRLRMPDDDLAWNDLVRGPVTFAAG HHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHCCCHHHCCC SVPDFALTRASGDPLYTLVNPCDDALMKITHVLRGEDLLPSTPRQLALHQALIRIGVAER CCCCCEEECCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH IPKFAHLPTVLGEGTKKLSKRDPQSNLFAHRDRGFIPEGLLNYLALLGWSIADDHDLFGL CCHHHHHHHHHHCCHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCH DEMVAAFDVADVNSSPARFDQKKADALNAEHIRMLDVGDFTVRLRDHLDTHGHHIALDEA HHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEECCCEEEHHHHHCCCCCCEEEEHHH AFAAAAELVQTRIVVLGDAWELLKFFNDDQYVIDPKAAAKELGPDGAAVLDAALAALTSA HHHHHHHHHHHHEEEECCHHHHHHHHCCCCEEECCHHHHHHCCCCHHHHHHHHHHHHHCC TDWTAPLIEAALKDALIEGLALKPRKAFSPIRVAATGTTVSPPLFESLELLGRDRSMQRL CCCHHHHHHHHHHHHHHHCCCCCCHHCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHH RAARQLVGHA HHHHHHHCCC >Mature Secondary Structure TATETVRVRFCPSPTGTPHVGLVRTALFNWAYARHTGGTFVFRIEDTDAQRDSEESYLA CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHH LLDALRWLGLDWDEGPEVGGPYGPYRQSQRAEIYRDVLARLLAAGEAYHAFSTPEEVEAR HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHH HVAAGRNPKLGYDNFDRHLTDAQRAAYLAEGRQPVVRLRMPDDDLAWNDLVRGPVTFAAG HHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHCCCHHHCCC SVPDFALTRASGDPLYTLVNPCDDALMKITHVLRGEDLLPSTPRQLALHQALIRIGVAER CCCCCEEECCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH IPKFAHLPTVLGEGTKKLSKRDPQSNLFAHRDRGFIPEGLLNYLALLGWSIADDHDLFGL CCHHHHHHHHHHCCHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCH DEMVAAFDVADVNSSPARFDQKKADALNAEHIRMLDVGDFTVRLRDHLDTHGHHIALDEA HHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEECCCEEEHHHHHCCCCCCEEEEHHH AFAAAAELVQTRIVVLGDAWELLKFFNDDQYVIDPKAAAKELGPDGAAVLDAALAALTSA HHHHHHHHHHHHEEEECCHHHHHHHHCCCCEEECCHHHHHHCCCCHHHHHHHHHHHHHCC TDWTAPLIEAALKDALIEGLALKPRKAFSPIRVAATGTTVSPPLFESLELLGRDRSMQRL CCCHHHHHHHHHHHHHHHCCCCCCHHCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHH RAARQLVGHA HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]