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The map label for this gene is yraN [C]

Identifier: 121638779

GI number: 121638779

Start: 3161874

End: 3162260

Strand: Reverse

Name: yraN [C]

Synonym: BCG_2919c

Alternate gene names: 121638779

Gene position: 3162260-3161874 (Counterclockwise)

Preceding gene: 121638780

Following gene: 121638778

Centisome position: 72.29

GC content: 67.44

Gene sequence:

>387_bases
ATGACAACCCTGAAGACGATGACTCGGGTTCAGCTGGGAGCGATGGGCGAGGCCCTAGCGGTGGACTACCTGACCAGCAT
GGGGTTGCGGATCTTGAACCGCAACTGGCGTTGCCGCTACGGCGAGCTGGACGTGATCGCCTGCGACGCTGCCACCCGCA
CGGTGGTGTTCGTCGAGGTCAAGACCCGCACCGGCGACGGTTATGGGGGGCTCGCGCACGCGGTGACCGAGCGCAAGGTT
CGCCGCCTGCGTCGCCTGGCCGGGCTGTGGCTGGCCGACCAGGAAGAGCGCTGGGCTGCGGTGCGCATCGATGTGATCGG
CGTGCGAGTCGGCCCCAAGAATTCAGGCCGCACCCCAGAGCTCACCCACCTGCAGGGGATCGGCTGA

Upstream 100 bases:

>100_bases
GCTGTGGACAGGGCCGCGACTGGGGATAACTGGTCGTCGCGGCATCGGTGAGACGCGATTCGTGGCAGGTGATGTCGGGG
CCAGCGTGCAGGTTGGCCGC

Downstream 100 bases:

>100_bases
TGGCGCTGGGGCGTGCGTTCTCGGTCGCGGTGCGGGGGCTGGACGGCGAGATCGTGGAAATCGAAGCCGACATCACCTCA
GGGTTGCCGGGTGTGCATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MTTLKTMTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTRTGDGYGGLAHAVTERKV
RRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTHLQGIG

Sequences:

>Translated_128_residues
MTTLKTMTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTRTGDGYGGLAHAVTERKV
RRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTHLQGIG
>Mature_127_residues
TTLKTMTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEVKTRTGDGYGGLAHAVTERKVR
RLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPELTHLQGIG

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2898_MYCTU (P67230)

Other databases:

- EMBL:   BX842581
- EMBL:   AE000516
- PIR:   E70926
- RefSeq:   NP_217414.1
- RefSeq:   NP_337478.1
- ProteinModelPortal:   P67230
- EnsemblBacteria:   EBMYCT00000000188
- EnsemblBacteria:   EBMYCT00000072950
- GeneID:   888507
- GeneID:   925312
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT2966
- KEGG:   mtu:Rv2898c
- TIGR:   MT2966
- TubercuList:   Rv2898c
- GeneTree:   EBGT00050000017008
- HOGENOM:   HBG710155
- OMA:   VERNWRC
- ProtClustDB:   PRK12497
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 14224; Mature: 14093

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLKTMTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEV
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHEECCCCCEECCCEEEEEECCCCEEEEEEEE
KTRTGDGYGGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPE
EECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCC
LTHLQGIG
CCEECCCC
>Mature Secondary Structure 
TTLKTMTRVQLGAMGEALAVDYLTSMGLRILNRNWRCRYGELDVIACDAATRTVVFVEV
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHEECCCCCEECCCEEEEEECCCCEEEEEEEE
KTRTGDGYGGLAHAVTERKVRRLRRLAGLWLADQEERWAAVRIDVIGVRVGPKNSGRTPE
EECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCC
LTHLQGIG
CCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036