| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121638687
Identifier: 121638687
GI number: 121638687
Start: 3067106
End: 3068260
Strand: Direct
Name: 121638687
Synonym: BCG_2825
Alternate gene names: NA
Gene position: 3067106-3068260 (Clockwise)
Preceding gene: 121638686
Following gene: 121638688
Centisome position: 70.11
GC content: 64.42
Gene sequence:
>1155_bases GTGGTGTCCACCACCGGGATGGGTCGTTCGACGGCCCGGCGGATGCTGACCGGCCCGGGGCTGCCGGAGCCGGCCGAGCA GGTCGACGGGCGCAGGCTGCGGGCGCGGGGCTTCAGTGACGACGCCAGGGCGCTTTTAGAGCACGTGTGGGCCTTGATGG GCATGCCGTGCGGCAAGTACCTGGTGGTGATGCTCGAGCTGTGGCTGCCGCTTGTGGCCGCCGCCGGTGATCTTGACAAG CCGTTCGCCACCGAAGCGGCGGTGGCGGAGTTGAAGGCGATGAGCGCGGCCACCGTGGACCGCTACCTCAAACCCGCCCG CGAGCGGATGCGCATCAAAGGCATCTCGACAACCAAACCCTCACCATTGCTGCGTAATTCGATCACCATCCACACCTGTT CGGATGAGGCGCCCAAGGTCCCGGGGGTGATCGAGGCCGACACTGTGGCGCACTGCGGCCCGAGTCTAATCGGCGAGTTC GCCCGCACCCTGACGATGACTGATCTGGTGACCGGCTGGACCGAGAACGCCTCGATCCGCAACAACGCGGCCAAGTGGAT CCTCGAGGGCATCAAGGAGTGCCAGCAGCGGTTCCCATTCCCGATGACGGTTTTCGATTCGGACTGCGGGGGCGAGTTCA TCAATCACGACGTCGCCGGCTGGCTGCAGGCCCGCGACATCGCCCAGACTCGCTCGCGGCCGTACCAGAAGAACGACCAG GCCCATGTCGAGTCCAAGAACAATCATGTGGTGCGCAAACACGCGTTCTACTGGCGCTATGACACCGGCGAAGAGCTGGA GCTGCTCAACCGGCTATGGCCGTTGGTGTCGCTGCGGTGCAACTTCTTCACCCCGACCAAAAAGCCCGTCGGCTACACCA GCACCGTCAACGGTCGCCGCAAGCGCATCTATGACAAGCCGGCCACCCCATGGCAGCGCCTGCAGGCATCGGGCGTCCTT GATGCACAGCAACTCTCGACCGTGGCCGCCCGAATCGAAGGCTTCAACCCGGCCGATCTGACCCGCCAGATCAACGCGAT CCAAACGCAGCTGCTCGACCTGGCCAAGACCAAGACCGAGGCCCTGGCCACCGCCCGCCACATCGACCTGCAATCATTGC AACCGTCAATCAACCGATTGGCCAAGGCGAAGTAA
Upstream 100 bases:
>100_bases GGACACGAGGAAACTGCCCACCAGCCACACCTACTTCGCGCTCACTTTTAAGTGAGGCACTTCGGCATCGAAGGCGGATA AGACCAAGATCCTGGATCGG
Downstream 100 bases:
>100_bases TGCAAGCCCCCCACGCGCTCACTATGCGTGAGGCACCAGCCACGCTTCGCGCTCACTTCTACGTGAGGCACCTCGGATGC TGTTGCGAATCCTGTTGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MVSTTGMGRSTARRMLTGPGLPEPAEQVDGRRLRARGFSDDARALLEHVWALMGMPCGKYLVVMLELWLPLVAAAGDLDK PFATEAAVAELKAMSAATVDRYLKPARERMRIKGISTTKPSPLLRNSITIHTCSDEAPKVPGVIEADTVAHCGPSLIGEF ARTLTMTDLVTGWTENASIRNNAAKWILEGIKECQQRFPFPMTVFDSDCGGEFINHDVAGWLQARDIAQTRSRPYQKNDQ AHVESKNNHVVRKHAFYWRYDTGEELELLNRLWPLVSLRCNFFTPTKKPVGYTSTVNGRRKRIYDKPATPWQRLQASGVL DAQQLSTVAARIEGFNPADLTRQINAIQTQLLDLAKTKTEALATARHIDLQSLQPSINRLAKAK
Sequences:
>Translated_384_residues MVSTTGMGRSTARRMLTGPGLPEPAEQVDGRRLRARGFSDDARALLEHVWALMGMPCGKYLVVMLELWLPLVAAAGDLDK PFATEAAVAELKAMSAATVDRYLKPARERMRIKGISTTKPSPLLRNSITIHTCSDEAPKVPGVIEADTVAHCGPSLIGEF ARTLTMTDLVTGWTENASIRNNAAKWILEGIKECQQRFPFPMTVFDSDCGGEFINHDVAGWLQARDIAQTRSRPYQKNDQ AHVESKNNHVVRKHAFYWRYDTGEELELLNRLWPLVSLRCNFFTPTKKPVGYTSTVNGRRKRIYDKPATPWQRLQASGVL DAQQLSTVAARIEGFNPADLTRQINAIQTQLLDLAKTKTEALATARHIDLQSLQPSINRLAKAK >Mature_384_residues MVSTTGMGRSTARRMLTGPGLPEPAEQVDGRRLRARGFSDDARALLEHVWALMGMPCGKYLVVMLELWLPLVAAAGDLDK PFATEAAVAELKAMSAATVDRYLKPARERMRIKGISTTKPSPLLRNSITIHTCSDEAPKVPGVIEADTVAHCGPSLIGEF ARTLTMTDLVTGWTENASIRNNAAKWILEGIKECQQRFPFPMTVFDSDCGGEFINHDVAGWLQARDIAQTRSRPYQKNDQ AHVESKNNHVVRKHAFYWRYDTGEELELLNRLWPLVSLRCNFFTPTKKPVGYTSTVNGRRKRIYDKPATPWQRLQASGVL DAQQLSTVAARIEGFNPADLTRQINAIQTQLLDLAKTKTEALATARHIDLQSLQPSINRLAKAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 integrase catalytic domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001584 - InterPro: IPR012337 [H]
Pfam domain/function: PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 42761; Mature: 42761
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: PS50994 INTEGRASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSTTGMGRSTARRMLTGPGLPEPAEQVDGRRLRARGFSDDARALLEHVWALMGMPCGKY CCCCCCCCHHHHHHHHCCCCCCCHHHHHCCCEEHHCCCCHHHHHHHHHHHHHHCCCHHHH LVVMLELWLPLVAAAGDLDKPFATEAAVAELKAMSAATVDRYLKPARERMRIKGISTTKP HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SPLLRNSITIHTCSDEAPKVPGVIEADTVAHCGPSLIGEFARTLTMTDLVTGWTENASIR CCHHHCCEEEEECCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHH NNAAKWILEGIKECQQRFPFPMTVFDSDCGGEFINHDVAGWLQARDIAQTRSRPYQKNDQ HHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC AHVESKNNHVVRKHAFYWRYDTGEELELLNRLWPLVSLRCNFFTPTKKPVGYTSTVNGRR HHHCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHH KRIYDKPATPWQRLQASGVLDAQQLSTVAARIEGFNPADLTRQINAIQTQLLDLAKTKTE HHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH ALATARHIDLQSLQPSINRLAKAK HHHHHHHCCHHHHCHHHHHHHCCC >Mature Secondary Structure MVSTTGMGRSTARRMLTGPGLPEPAEQVDGRRLRARGFSDDARALLEHVWALMGMPCGKY CCCCCCCCHHHHHHHHCCCCCCCHHHHHCCCEEHHCCCCHHHHHHHHHHHHHHCCCHHHH LVVMLELWLPLVAAAGDLDKPFATEAAVAELKAMSAATVDRYLKPARERMRIKGISTTKP HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SPLLRNSITIHTCSDEAPKVPGVIEADTVAHCGPSLIGEFARTLTMTDLVTGWTENASIR CCHHHCCEEEEECCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHH NNAAKWILEGIKECQQRFPFPMTVFDSDCGGEFINHDVAGWLQARDIAQTRSRPYQKNDQ HHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC AHVESKNNHVVRKHAFYWRYDTGEELELLNRLWPLVSLRCNFFTPTKKPVGYTSTVNGRR HHHCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHH KRIYDKPATPWQRLQASGVLDAQQLSTVAARIEGFNPADLTRQINAIQTQLLDLAKTKTE HHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH ALATARHIDLQSLQPSINRLAKAK HHHHHHHCCHHHHCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]