| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is hflX [H]
Identifier: 121638600
GI number: 121638600
Start: 2991112
End: 2992599
Strand: Reverse
Name: hflX [H]
Synonym: BCG_2738c
Alternate gene names: 121638600
Gene position: 2992599-2991112 (Counterclockwise)
Preceding gene: 121638601
Following gene: 121638599
Centisome position: 68.41
GC content: 67.54
Gene sequence:
>1488_bases ATGCCGGCAAATTCAGATGCGCGGCCAGCTGCCACGTGCCACCATCGGGTACTGGCTATGACATATCCAGATCCGCCCCA GACGGGCCTTTCGGACTTCACACCGAGCCTCGGTGAGCTCGCACTCGAGGACAGATCGGCGCTGCGCCGGGTTGCCGGGT TGTCGACCGAGCTTGCCGACGTCTCCGAGGTGGAGTACCGCCAGCTGCGCCTGGAGCGGGTGGTGTTGGTGGGAGTGTGG ACCGAGGGCAGCGCGGCTGACAACCGGGCAAGCCTGGCCGAGCTGGCGGCATTGGCCGAAACCGCCGGCTCCCAGGTGCT CGAAGGACTCATCCAGCGTCGCGACAAGCCCGACCCGTCGACCTACATCGGCTCGGGCAAAGCGGCCGAACTCCGCGAAG TGATCGTGGCGACCGGCGCCGACACCGTCATCTGCGACGGCGAACTGTCGCCGGCGCAGTTGACCGCCTTGGAAAAGGCT GTGCAGGTTAAGGTTATTGACCGCACCGCGCTGATCCTCGACATCTTTGCCCAGCATGCCACCAGCAGGGAGGGCAAAGC CCAGGTGTCGCTGGCTCAGATGGAGTACATGCTGCCGCGGCTGCGCGGCTGGGGTGAGTCGATGTCACGGCAGGCGGGCG GTCGCGCCGGTGACAGTGGTGGCGGGGTGGGTCTGCGCGGTCCCGGTGAGACCAAGATCGAGACTGACCGACGCCGCATC CGCGAGCGGATGGCCAAGTTACGGCGCGACATCAGGGCCATGAAACAGGTCCGCGACACCCAGCGCAGCCGTCGCCGGCA CAGTGACGTGCCGTCGATCGCGATTGTCGGCTACACCAACGCGGGTAAGTCCAGCCTGCTCAACGCGCTGACCGGGGCCG GGGTGCTGGTACAGGACGCGCTGTTTGCCACCCTGGAACCCACCACCAGGCGCGCGGAGTTCGGTGACGGTAGGCCAGTC GTGCTCACCGACACCGTCGGCTTTGTGCGGCACCTGCCCACCCAGTTGGTCGAGGCGTTTCGCTCCACGCTGGAGGAGGT CGTGCACGCCGATCTATTGGTCCACGTCGTGGACGGATCCGACGGCCACCCGCTAGCCCAGATCGACGCGGTCCGTCAGG TGATCTCCGAGGTGATCGCCGACCATGACGGCGATCCGCCGCCCGAGCTGCTGGTAGTGAACAAGGTTGACGTCGCTAGC GACCTGATGCTGGCCAAGCTGCGGCACGGGCTGCCCGGCGCGGTGTTCGTTTCCGCCCGCACCGGCGACGGTATCGATGC GCTCCGACGGCGGATGGCCGAGCTGGTTGTGCCCGCCGACACCGCCGTCGACGTGGTGATCCCGTACGACCGCGGCGACC TGGTGGCCCGTGTGCACGCCGATGGGCGGATACAGCAGGCGGAGCACAAGCCCGAGGGCACCCGGATCAAGGCCCGTGTC CCGGAGGCGCTGGCTGCCACCTTGCGCGAGTTTGCGCCGCGAGCGTAA
Upstream 100 bases:
>100_bases GATGCCACCAGCTTCCTGCGTGGGCCGTCAGTGTTGGTGGCCCGCGGAGATCTCGCTGACGATTGGTGGAACGCGATGGG GTGATCCCAGGCAGCGGCTT
Downstream 100 bases:
>100_bases CGCCACGGCGAATTCGGTGCACGCAAGCTCGCCGTGGCGTTACGCTCGCGGCGGCTGGCGCGCCCCGGCTACCTGCCGAC CAACCGCCCGGTTGGTATTG
Product: putative GTP-binding protein hflX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 495; Mature: 494
Protein sequence:
>495_residues MPANSDARPAATCHHRVLAMTYPDPPQTGLSDFTPSLGELALEDRSALRRVAGLSTELADVSEVEYRQLRLERVVLVGVW TEGSAADNRASLAELAALAETAGSQVLEGLIQRRDKPDPSTYIGSGKAAELREVIVATGADTVICDGELSPAQLTALEKA VQVKVIDRTALILDIFAQHATSREGKAQVSLAQMEYMLPRLRGWGESMSRQAGGRAGDSGGGVGLRGPGETKIETDRRRI RERMAKLRRDIRAMKQVRDTQRSRRRHSDVPSIAIVGYTNAGKSSLLNALTGAGVLVQDALFATLEPTTRRAEFGDGRPV VLTDTVGFVRHLPTQLVEAFRSTLEEVVHADLLVHVVDGSDGHPLAQIDAVRQVISEVIADHDGDPPPELLVVNKVDVAS DLMLAKLRHGLPGAVFVSARTGDGIDALRRRMAELVVPADTAVDVVIPYDRGDLVARVHADGRIQQAEHKPEGTRIKARV PEALAATLREFAPRA
Sequences:
>Translated_495_residues MPANSDARPAATCHHRVLAMTYPDPPQTGLSDFTPSLGELALEDRSALRRVAGLSTELADVSEVEYRQLRLERVVLVGVW TEGSAADNRASLAELAALAETAGSQVLEGLIQRRDKPDPSTYIGSGKAAELREVIVATGADTVICDGELSPAQLTALEKA VQVKVIDRTALILDIFAQHATSREGKAQVSLAQMEYMLPRLRGWGESMSRQAGGRAGDSGGGVGLRGPGETKIETDRRRI RERMAKLRRDIRAMKQVRDTQRSRRRHSDVPSIAIVGYTNAGKSSLLNALTGAGVLVQDALFATLEPTTRRAEFGDGRPV VLTDTVGFVRHLPTQLVEAFRSTLEEVVHADLLVHVVDGSDGHPLAQIDAVRQVISEVIADHDGDPPPELLVVNKVDVAS DLMLAKLRHGLPGAVFVSARTGDGIDALRRRMAELVVPADTAVDVVIPYDRGDLVARVHADGRIQQAEHKPEGTRIKARV PEALAATLREFAPRA >Mature_494_residues PANSDARPAATCHHRVLAMTYPDPPQTGLSDFTPSLGELALEDRSALRRVAGLSTELADVSEVEYRQLRLERVVLVGVWT EGSAADNRASLAELAALAETAGSQVLEGLIQRRDKPDPSTYIGSGKAAELREVIVATGADTVICDGELSPAQLTALEKAV QVKVIDRTALILDIFAQHATSREGKAQVSLAQMEYMLPRLRGWGESMSRQAGGRAGDSGGGVGLRGPGETKIETDRRRIR ERMAKLRRDIRAMKQVRDTQRSRRRHSDVPSIAIVGYTNAGKSSLLNALTGAGVLVQDALFATLEPTTRRAEFGDGRPVV LTDTVGFVRHLPTQLVEAFRSTLEEVVHADLLVHVVDGSDGHPLAQIDAVRQVISEVIADHDGDPPPELLVVNKVDVASD LMLAKLRHGLPGAVFVSARTGDGIDALRRRMAELVVPADTAVDVVIPYDRGDLVARVHADGRIQQAEHKPEGTRIKARVP EALAATLREFAPRA
Specific function: Unknown
COG id: COG2262
COG function: function code R; GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI310124269, Length=215, Percent_Identity=34.4186046511628, Blast_Score=112, Evalue=6e-25, Organism=Homo sapiens, GI310124267, Length=215, Percent_Identity=34.4186046511628, Blast_Score=112, Evalue=6e-25, Organism=Homo sapiens, GI310124171, Length=215, Percent_Identity=34.4186046511628, Blast_Score=112, Evalue=6e-25, Organism=Homo sapiens, GI310124169, Length=215, Percent_Identity=34.4186046511628, Blast_Score=112, Evalue=6e-25, Organism=Homo sapiens, GI310133116, Length=223, Percent_Identity=34.5291479820628, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI310133118, Length=223, Percent_Identity=34.5291479820628, Blast_Score=111, Evalue=2e-24, Organism=Escherichia coli, GI1790615, Length=414, Percent_Identity=40.0966183574879, Blast_Score=280, Evalue=2e-76, Organism=Caenorhabditis elegans, GI17561038, Length=283, Percent_Identity=31.8021201413428, Blast_Score=119, Evalue=5e-27, Organism=Drosophila melanogaster, GI24650079, Length=324, Percent_Identity=32.7160493827161, Blast_Score=128, Evalue=1e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR016496 - InterPro: IPR006073 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 53386; Mature: 53255
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPANSDARPAATCHHRVLAMTYPDPPQTGLSDFTPSLGELALEDRSALRRVAGLSTELAD CCCCCCCCCHHHHCCEEEEEECCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHH VSEVEYRQLRLERVVLVGVWTEGSAADNRASLAELAALAETAGSQVLEGLIQRRDKPDPS HHHHHHHHHHHEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TYIGSGKAAELREVIVATGADTVICDGELSPAQLTALEKAVQVKVIDRTALILDIFAQHA CCCCCCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHEEEEEHHHHHHHHHHHHHH TSREGKAQVSLAQMEYMLPRLRGWGESMSRQAGGRAGDSGGGVGLRGPGETKIETDRRRI CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHH RERMAKLRRDIRAMKQVRDTQRSRRRHSDVPSIAIVGYTNAGKSSLLNALTGAGVLVQDA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCHHHHHH LFATLEPTTRRAEFGDGRPVVLTDTVGFVRHLPTQLVEAFRSTLEEVVHADLLVHVVDGS HHHHCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECC DGHPLAQIDAVRQVISEVIADHDGDPPPELLVVNKVDVASDLMLAKLRHGLPGAVFVSAR CCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEEC TGDGIDALRRRMAELVVPADTAVDVVIPYDRGDLVARVHADGRIQQAEHKPEGTRIKARV CCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCCCCCHHHCCCCCCCEEEECC PEALAATLREFAPRA CHHHHHHHHHHCCCC >Mature Secondary Structure PANSDARPAATCHHRVLAMTYPDPPQTGLSDFTPSLGELALEDRSALRRVAGLSTELAD CCCCCCCCHHHHCCEEEEEECCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHH VSEVEYRQLRLERVVLVGVWTEGSAADNRASLAELAALAETAGSQVLEGLIQRRDKPDPS HHHHHHHHHHHEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TYIGSGKAAELREVIVATGADTVICDGELSPAQLTALEKAVQVKVIDRTALILDIFAQHA CCCCCCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHEEEEEHHHHHHHHHHHHHH TSREGKAQVSLAQMEYMLPRLRGWGESMSRQAGGRAGDSGGGVGLRGPGETKIETDRRRI CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHH RERMAKLRRDIRAMKQVRDTQRSRRRHSDVPSIAIVGYTNAGKSSLLNALTGAGVLVQDA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCHHHHHH LFATLEPTTRRAEFGDGRPVVLTDTVGFVRHLPTQLVEAFRSTLEEVVHADLLVHVVDGS HHHHCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECC DGHPLAQIDAVRQVISEVIADHDGDPPPELLVVNKVDVASDLMLAKLRHGLPGAVFVSAR CCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEEC TGDGIDALRRRMAELVVPADTAVDVVIPYDRGDLVARVHADGRIQQAEHKPEGTRIKARV CCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCCCCCHHHCCCCCCCEEEECC PEALAATLREFAPRA CHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8248183; 7610040; 9278503; 2020545; 3040675 [H]