| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is ygjT [C]
Identifier: 121638598
GI number: 121638598
Start: 2988594
End: 2989787
Strand: Direct
Name: ygjT [C]
Synonym: BCG_2736
Alternate gene names: 121638598
Gene position: 2988594-2989787 (Clockwise)
Preceding gene: 121638597
Following gene: 121638605
Centisome position: 68.32
GC content: 59.88
Gene sequence:
>1194_bases ATGGGTGCTTCCGGCCTGGTCTGGACCCTCACCATCGTCCTGATCGCCGGCTTGATGTTGGTCGACTACGTCCTCCACGT ACGCAAGACCCATGTACCGACGTTACGTCAGGCCGTCATCCAGTCGGCGACCTTCGTGGGGATAGCGATCCTGTTCGGCA TCGCAGTGGTGGTGTTCGGCGGCTCAGAGCTGGCGGTCGAATATTTCGCCTGCTACCTGACCGACGAAGCCCTGTCGGTC GACAACCTGTTCGTATTTCTGGTCATCATCAGCAGCTTCGGGGTGCCTCGTCTCGCGCAACAAAAGGTGCTGTTGTTCGG TATCGCGTTTGCGCTCGTCACGCGCACCGGATTCATCTTCGTCGGCGCCGCGCTCATCGAGAACTTCAACTCGGCCTTTT ACCTGTTCGGCCTGGTCCTACTGGTCATGGCGGGCAACCTCGCCAGACCCACCGGGCTAGAAAGCCGCGACGCCGAAACG CTCAAGAGGTCCGTCATTATCCGGCTAGCCGACCGCTTCTTGCGGACCTCACAGGACTACAACGGAGACCGGTTGTTCAC GGTCTCGAACAACAAGCGAATGATGACCCCGTTGTTGCTGGTCATGATCGCCGTGGGTGGCACTGACATACTATTTGCGT TCGATTCGATTCCAGCACTTTTCGGCCTGACCCAAAACGTCTATCTGGTGTTCGCCGCCACCGCGTTCTCGCTGTTGGGC CTGCGCCAGCTGTACTTCTTGATCGACGGCCTGCTGGATCGGCTAGTCTATCTGTCTTACGGGTTGGCCGTGATTCTTGG CTTCATCGGCGTCAAACTGATGCTGGAAGCATTGCACGACAACAAGATTCCGTTCATCAACGGCGGCAAGCCGGTCCCGA CCGTGGAGGTGAGCACCACCCAGTCGTTGACGGTGATCATCATCGTCCTGCTGATCACGACCGCGGCGTCGTTCTGGTCG GCGCGCGGACGGGCGCAGAACGCCATGGCGAGGGCCCGGCGGTATGCAACCGCATACCTCGACCTGCACTATGAGACCGA GTCGGCCGAACGCGACAAGATCTTTACCGCACTGCTGGCCGCTGAACGCCAGATCAACACTCTCCCAACGAAATACCGCA TGCAGCCCGGACAGGACGACGACCTGATGACGCTGCTGTGCAGGGCCCATGCCGCGCGCGACGCGCACATGTGA
Upstream 100 bases:
>100_bases GCTGCTGTGGTGAGCAACCGGGCTGCAGCCCGGGCCGGGTTTGCGTTACCGTGCCGGAAACGACAACCGGACTGATGCGG TGAGAGGAATCCCGGCTGAC
Downstream 100 bases:
>100_bases GCCCGCGCTAGCTGAGGGCTAGCTGCGCCTAAACACCCAAGCCACGACCGATGATCTCTTTCATGATCTCGGTCGTGCCA CCGTAAATCGTCTGTACCCG
Product: putative integral membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MGASGLVWTLTIVLIAGLMLVDYVLHVRKTHVPTLRQAVIQSATFVGIAILFGIAVVVFGGSELAVEYFACYLTDEALSV DNLFVFLVIISSFGVPRLAQQKVLLFGIAFALVTRTGFIFVGAALIENFNSAFYLFGLVLLVMAGNLARPTGLESRDAET LKRSVIIRLADRFLRTSQDYNGDRLFTVSNNKRMMTPLLLVMIAVGGTDILFAFDSIPALFGLTQNVYLVFAATAFSLLG LRQLYFLIDGLLDRLVYLSYGLAVILGFIGVKLMLEALHDNKIPFINGGKPVPTVEVSTTQSLTVIIIVLLITTAASFWS ARGRAQNAMARARRYATAYLDLHYETESAERDKIFTALLAAERQINTLPTKYRMQPGQDDDLMTLLCRAHAARDAHM
Sequences:
>Translated_397_residues MGASGLVWTLTIVLIAGLMLVDYVLHVRKTHVPTLRQAVIQSATFVGIAILFGIAVVVFGGSELAVEYFACYLTDEALSV DNLFVFLVIISSFGVPRLAQQKVLLFGIAFALVTRTGFIFVGAALIENFNSAFYLFGLVLLVMAGNLARPTGLESRDAET LKRSVIIRLADRFLRTSQDYNGDRLFTVSNNKRMMTPLLLVMIAVGGTDILFAFDSIPALFGLTQNVYLVFAATAFSLLG LRQLYFLIDGLLDRLVYLSYGLAVILGFIGVKLMLEALHDNKIPFINGGKPVPTVEVSTTQSLTVIIIVLLITTAASFWS ARGRAQNAMARARRYATAYLDLHYETESAERDKIFTALLAAERQINTLPTKYRMQPGQDDDLMTLLCRAHAARDAHM >Mature_396_residues GASGLVWTLTIVLIAGLMLVDYVLHVRKTHVPTLRQAVIQSATFVGIAILFGIAVVVFGGSELAVEYFACYLTDEALSVD NLFVFLVIISSFGVPRLAQQKVLLFGIAFALVTRTGFIFVGAALIENFNSAFYLFGLVLLVMAGNLARPTGLESRDAETL KRSVIIRLADRFLRTSQDYNGDRLFTVSNNKRMMTPLLLVMIAVGGTDILFAFDSIPALFGLTQNVYLVFAATAFSLLGL RQLYFLIDGLLDRLVYLSYGLAVILGFIGVKLMLEALHDNKIPFINGGKPVPTVEVSTTQSLTVIIIVLLITTAASFWSA RGRAQNAMARARRYATAYLDLHYETESAERDKIFTALLAAERQINTLPTKYRMQPGQDDDLMTLLCRAHAARDAHM
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the terC family
Homologues:
Organism=Escherichia coli, GI48994922, Length=279, Percent_Identity=34.7670250896057, Blast_Score=157, Evalue=8e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2723_MYCTU (P0A614)
Other databases:
- EMBL: BX842580 - EMBL: AE000516 - PIR: B70505 - RefSeq: NP_217239.1 - RefSeq: NP_337298.1 - EnsemblBacteria: EBMYCT00000000765 - EnsemblBacteria: EBMYCT00000069065 - GeneID: 887768 - GeneID: 925497 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2795 - KEGG: mtu:Rv2723 - TIGR: MT2795 - TubercuList: Rv2723 - GeneTree: EBGT00050000017175 - HOGENOM: HBG292583 - OMA: GLTQNVF - ProtClustDB: CLSK792033 - InterPro: IPR005496 - InterPro: IPR022369 - TIGRFAMs: TIGR03718
Pfam domain/function: PF03741 TerC
EC number: NA
Molecular weight: Translated: 43680; Mature: 43549
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x16e9cb00)-; HASH(0x17c9f7d4)-; HASH(0x17c607e4)-; HASH(0x17f82e14)-; HASH(0x1775e12c)-; HASH(0x180347c0)-; HASH(0x17f94040)-; HASH(0x17a6fb54)-; HASH(0x17ffd678)-;
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGASGLVWTLTIVLIAGLMLVDYVLHVRKTHVPTLRQAVIQSATFVGIAILFGIAVVVFG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC GSELAVEYFACYLTDEALSVDNLFVFLVIISSFGVPRLAQQKVLLFGIAFALVTRTGFIF CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH VGAALIENFNSAFYLFGLVLLVMAGNLARPTGLESRDAETLKRSVIIRLADRFLRTSQDY HHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC NGDRLFTVSNNKRMMTPLLLVMIAVGGTDILFAFDSIPALFGLTQNVYLVFAATAFSLLG CCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHH LRQLYFLIDGLLDRLVYLSYGLAVILGFIGVKLMLEALHDNKIPFINGGKPVPTVEVSTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEECCC QSLTVIIIVLLITTAASFWSARGRAQNAMARARRYATAYLDLHYETESAERDKIFTALLA CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHH AERQINTLPTKYRMQPGQDDDLMTLLCRAHAARDAHM HHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHCCCCH >Mature Secondary Structure GASGLVWTLTIVLIAGLMLVDYVLHVRKTHVPTLRQAVIQSATFVGIAILFGIAVVVFG CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC GSELAVEYFACYLTDEALSVDNLFVFLVIISSFGVPRLAQQKVLLFGIAFALVTRTGFIF CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH VGAALIENFNSAFYLFGLVLLVMAGNLARPTGLESRDAETLKRSVIIRLADRFLRTSQDY HHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC NGDRLFTVSNNKRMMTPLLLVMIAVGGTDILFAFDSIPALFGLTQNVYLVFAATAFSLLG CCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHH LRQLYFLIDGLLDRLVYLSYGLAVILGFIGVKLMLEALHDNKIPFINGGKPVPTVEVSTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEECCC QSLTVIIIVLLITTAASFWSARGRAQNAMARARRYATAYLDLHYETESAERDKIFTALLA CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHH AERQINTLPTKYRMQPGQDDDLMTLLCRAHAARDAHM HHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036