| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is csp1 [H]
Identifier: 121638596
GI number: 121638596
Start: 2986205
End: 2988304
Strand: Reverse
Name: csp1 [H]
Synonym: BCG_2734c
Alternate gene names: 121638596
Gene position: 2988304-2986205 (Counterclockwise)
Preceding gene: 121638599
Following gene: 121638594
Centisome position: 68.31
GC content: 65.24
Gene sequence:
>2100_bases GTGAACGGGCAGAGAGGTCAATTGAGCACGCTGATCGGGCGTACGCTGCTCGGCTTGGCGGCCACGGCGGTGACCGCCGT GTTGCTGGCGCCCACGGTGGCGGCTTCGCCGATGGGCGATGCCGAGGACGCCATGATGGCCGCGTGGGAGAAGGCGGGTG GTGACACTTCAACACTTGGTGTCCGGAAAGGTGACGTTTACCCGATAGGCGACGGGTTCGCCCTGGACTTCGCCGGCGGC AAGATGTTTTTCACCCCGGCCACCGGTGCCAAATACCTCTACGGCCCGCTCCTGGACAAATACGAGTCGCTGGGCGGTGC AGCCGACAGCGATCTGGGATTCCCGACCATCAACGAGGTGCCCGGCCTTGCCGGACCCGACAGTCGCGTGAGCACGTTCT CCGCGGCCGACAACCCGGTGATTTTCTGGACGCCTGAACACGGTGCGTTCGTCGTGCGCGGCGCGCTGAATGCCGCGTGG GACAAGCTCGGCAGCTCGGGTGGCGTGCTGGGTGCCCCGGTCGGGGATGAAACCTACGACGGCGAGGTCACCGCCCAGAA GTTCAGCGGTGGTGAAGTCTCCTGGAACCGGGCAACCAAGGAGTTCACCACCGTTCCGGCGGTGCTGGCCGAGCAGCTGA AGGGTTTGCAGGTAGCGATCGATCCTTCCGCGGCGATCAACATGGCCTGGCGCGCAGCAGGTGGTGCCGCAGGTCCGCTG GGCGCCAAGAAGGGTGGGCAGTACCCGATCAGCGGAGACGGTATCGCCCAGGACTTCGTCGGTGGCAAGGTCTTCTTCAG CCCGGCAACCGGTGCAAACGCCGTCGAGGGTGAAATCCTGGCGAAGTACGAGTCGCTGGGCGGACCGGTCAGCAGCGACT TGGGTTTCCCCATCGCCAACGAAACTGATGGTGGTTTTGGGCCCTCCAGCCGGATCGTCAGGTTCTCCGCGGCCGACAAG CCGGTGATTTTCTGGGCTCCGGACCACGGCGCGTTCGTCGTGCGCGGAGCCATGGTGGCCGCGTGGGACAAGCTGCGCGG CCCCAACGGCAAGCTCGGCGCCCCGGTCGGCGACCAGACCGTCGACGGCGATGTTGTCTCACAGAAATTCACCGGCGGCA TGATTTCGTGGAACCGTGCAAAAAACACATTCACTACGGATCCCGCTAACCTAGCGCCCTTGCTGTCCGGTCTGCAGGTG TCAGGGCAGAACCAGCCAAGTACTTCGGCGATGCCCCCACCCGGCAAGAAGTTCACCTGGCATTGGTGGTGGTTAGGGGC CGCCGCCCTGGGGGTGCTCCTGGTCGTGATGGTGGCGTTGGTGGTGTTCGGATTGCGTCGGCGTCGACGTGGGTACGACG CCGCTGCTTACGACGATGACCGCGCTGGGGATGTCGAGTACGGTACCGCCGCTGATGGAGACTGGCCGCCCGACGAGGAC TTCGGTTCAGAGCATTTCGGTTTCGGCGACCAGTTCCCGCCGGAACCTGTGGCGCCGGACGCCGGGTCCACACCGCGGGT CAGCTGGCCGCGCGGCGCCGGGGCGGCTGTCGGTGATGCCGAGCATCTTCCGGGTGAGGAGGGCTACGGCAGCGACTTGC TGTCCGGCCCCAGCAACGTCGGGGTCGAGGAGGAAGACACCGATGCGGTGGACACCACGCCGACACCCGTTGTGTCGCAG GCCGACCTTTCCGAAGTCGGTCCCGATCTCATTGTTCCTGAGCGAGTGGTTCCGGAGACTTTCGTTCCGCAAGCCTTTGT TCCGGAAGCAGTGGCGCCTGAAGCGGTGCCGCCCGATGTCCACGCTGCCGATCTTGCTGACACTGGGTTGCCGGCGGCGG CTGTATCCGCAGCTGAAGACAGAGGCGGGCGGCACGCGGCCGCAGAACCGCCGGAACCGCCGAGTGCGGGCGTGCGCCCG GCAATTCATCTGCCGCTCGAGGACCCATACCAGATGCCGAACGGCTATCCCGTCAAAGCCAGTGTGAGCTTCGGCCTGTA TTACCCACCCGGCAGTGCGCTATACCACGACACGCTGGCCGAACTCTGGTTCGCCAGTGAAGAAGTGGCACAAGTCAACG GCTTCATTAGGGCGGATTGA
Upstream 100 bases:
>100_bases TTATGCGAGCCCGGGGACAATACGGACCGCAGCGGGGACCGGCCCACGGTGGGAGATCCACCGGCTGGCGGGCTAGGCAG GGCATCGGCTGGGAGGCTTG
Downstream 100 bases:
>100_bases CAGCCTGCACGCGGATCAGCATCAGACCTTGCGGATCACCGTGACGACCTTGCCCAGCACCGTCGCGTCGTTGCCCGGGA TGGGATCGAAGGCCGGGTTG
Product: putative transmembrane alanine and glycine rich protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 699; Mature: 699
Protein sequence:
>699_residues MNGQRGQLSTLIGRTLLGLAATAVTAVLLAPTVAASPMGDAEDAMMAAWEKAGGDTSTLGVRKGDVYPIGDGFALDFAGG KMFFTPATGAKYLYGPLLDKYESLGGAADSDLGFPTINEVPGLAGPDSRVSTFSAADNPVIFWTPEHGAFVVRGALNAAW DKLGSSGGVLGAPVGDETYDGEVTAQKFSGGEVSWNRATKEFTTVPAVLAEQLKGLQVAIDPSAAINMAWRAAGGAAGPL GAKKGGQYPISGDGIAQDFVGGKVFFSPATGANAVEGEILAKYESLGGPVSSDLGFPIANETDGGFGPSSRIVRFSAADK PVIFWAPDHGAFVVRGAMVAAWDKLRGPNGKLGAPVGDQTVDGDVVSQKFTGGMISWNRAKNTFTTDPANLAPLLSGLQV SGQNQPSTSAMPPPGKKFTWHWWWLGAAALGVLLVVMVALVVFGLRRRRRGYDAAAYDDDRAGDVEYGTAADGDWPPDED FGSEHFGFGDQFPPEPVAPDAGSTPRVSWPRGAGAAVGDAEHLPGEEGYGSDLLSGPSNVGVEEEDTDAVDTTPTPVVSQ ADLSEVGPDLIVPERVVPETFVPQAFVPEAVAPEAVPPDVHAADLADTGLPAAAVSAAEDRGGRHAAAEPPEPPSAGVRP AIHLPLEDPYQMPNGYPVKASVSFGLYYPPGSALYHDTLAELWFASEEVAQVNGFIRAD
Sequences:
>Translated_699_residues MNGQRGQLSTLIGRTLLGLAATAVTAVLLAPTVAASPMGDAEDAMMAAWEKAGGDTSTLGVRKGDVYPIGDGFALDFAGG KMFFTPATGAKYLYGPLLDKYESLGGAADSDLGFPTINEVPGLAGPDSRVSTFSAADNPVIFWTPEHGAFVVRGALNAAW DKLGSSGGVLGAPVGDETYDGEVTAQKFSGGEVSWNRATKEFTTVPAVLAEQLKGLQVAIDPSAAINMAWRAAGGAAGPL GAKKGGQYPISGDGIAQDFVGGKVFFSPATGANAVEGEILAKYESLGGPVSSDLGFPIANETDGGFGPSSRIVRFSAADK PVIFWAPDHGAFVVRGAMVAAWDKLRGPNGKLGAPVGDQTVDGDVVSQKFTGGMISWNRAKNTFTTDPANLAPLLSGLQV SGQNQPSTSAMPPPGKKFTWHWWWLGAAALGVLLVVMVALVVFGLRRRRRGYDAAAYDDDRAGDVEYGTAADGDWPPDED FGSEHFGFGDQFPPEPVAPDAGSTPRVSWPRGAGAAVGDAEHLPGEEGYGSDLLSGPSNVGVEEEDTDAVDTTPTPVVSQ ADLSEVGPDLIVPERVVPETFVPQAFVPEAVAPEAVPPDVHAADLADTGLPAAAVSAAEDRGGRHAAAEPPEPPSAGVRP AIHLPLEDPYQMPNGYPVKASVSFGLYYPPGSALYHDTLAELWFASEEVAQVNGFIRAD >Mature_699_residues MNGQRGQLSTLIGRTLLGLAATAVTAVLLAPTVAASPMGDAEDAMMAAWEKAGGDTSTLGVRKGDVYPIGDGFALDFAGG KMFFTPATGAKYLYGPLLDKYESLGGAADSDLGFPTINEVPGLAGPDSRVSTFSAADNPVIFWTPEHGAFVVRGALNAAW DKLGSSGGVLGAPVGDETYDGEVTAQKFSGGEVSWNRATKEFTTVPAVLAEQLKGLQVAIDPSAAINMAWRAAGGAAGPL GAKKGGQYPISGDGIAQDFVGGKVFFSPATGANAVEGEILAKYESLGGPVSSDLGFPIANETDGGFGPSSRIVRFSAADK PVIFWAPDHGAFVVRGAMVAAWDKLRGPNGKLGAPVGDQTVDGDVVSQKFTGGMISWNRAKNTFTTDPANLAPLLSGLQV SGQNQPSTSAMPPPGKKFTWHWWWLGAAALGVLLVVMVALVVFGLRRRRRGYDAAAYDDDRAGDVEYGTAADGDWPPDED FGSEHFGFGDQFPPEPVAPDAGSTPRVSWPRGAGAAVGDAEHLPGEEGYGSDLLSGPSNVGVEEEDTDAVDTTPTPVVSQ ADLSEVGPDLIVPERVVPETFVPQAFVPEAVAPEAVPPDVHAADLADTGLPAAAVSAAEDRGGRHAAAEPPEPPSAGVRP AIHLPLEDPYQMPNGYPVKASVSFGLYYPPGSALYHDTLAELWFASEEVAQVNGFIRAD
Specific function: One of the two major secreted proteins [H]
COG id: COG5479
COG function: function code M; Uncharacterized protein potentially involved in peptidoglycan biosynthesis
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000801 - InterPro: IPR013207 [H]
Pfam domain/function: PF00756 Esterase; PF08310 LGFP [H]
EC number: NA
Molecular weight: Translated: 72372; Mature: 72372
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGQRGQLSTLIGRTLLGLAATAVTAVLLAPTVAASPMGDAEDAMMAAWEKAGGDTSTLG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEE VRKGDVYPIGDGFALDFAGGKMFFTPATGAKYLYGPLLDKYESLGGAADSDLGFPTINEV EECCCEEECCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHC PGLAGPDSRVSTFSAADNPVIFWTPEHGAFVVRGALNAAWDKLGSSGGVLGAPVGDETYD CCCCCCCCCCEEEECCCCCEEEEECCCCCEEEECHHHHHHHHHCCCCCEEECCCCCCCCC GEVTAQKFSGGEVSWNRATKEFTTVPAVLAEQLKGLQVAIDPSAAINMAWRAAGGAAGPL CCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHEEEEEECCCCCCCCC GAKKGGQYPISGDGIAQDFVGGKVFFSPATGANAVEGEILAKYESLGGPVSSDLGFPIAN CCCCCCCCCCCCCCHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC ETDGGFGPSSRIVRFSAADKPVIFWAPDHGAFVVRGAMVAAWDKLRGPNGKLGAPVGDQT CCCCCCCCCCCEEEEECCCCCEEEEECCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCC VDGDVVSQKFTGGMISWNRAKNTFTTDPANLAPLLSGLQVSGQNQPSTSAMPPPGKKFTW CCCHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHCCEECCCCCCCCCCCCCCCCCEEE HWWWLGAAALGVLLVVMVALVVFGLRRRRRGYDAAAYDDDRAGDVEYGTAADGDWPPDED EHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC FGSEHFGFGDQFPPEPVAPDAGSTPRVSWPRGAGAAVGDAEHLPGEEGYGSDLLSGPSNV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHCCCCCC GVEEEDTDAVDTTPTPVVSQADLSEVGPDLIVPERVVPETFVPQAFVPEAVAPEAVPPDV CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHCCHHHCCCHHCCHHCCCCCCCCCC HAADLADTGLPAAAVSAAEDRGGRHAAAEPPEPPSAGVRPAIHLPLEDPYQMPNGYPVKA CHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEE SVSFGLYYPPGSALYHDTLAELWFASEEVAQVNGFIRAD EEEEEEEECCCCHHHHHHHHHHHHCHHHHHHHCCEEECC >Mature Secondary Structure MNGQRGQLSTLIGRTLLGLAATAVTAVLLAPTVAASPMGDAEDAMMAAWEKAGGDTSTLG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEE VRKGDVYPIGDGFALDFAGGKMFFTPATGAKYLYGPLLDKYESLGGAADSDLGFPTINEV EECCCEEECCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHC PGLAGPDSRVSTFSAADNPVIFWTPEHGAFVVRGALNAAWDKLGSSGGVLGAPVGDETYD CCCCCCCCCCEEEECCCCCEEEEECCCCCEEEECHHHHHHHHHCCCCCEEECCCCCCCCC GEVTAQKFSGGEVSWNRATKEFTTVPAVLAEQLKGLQVAIDPSAAINMAWRAAGGAAGPL CCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHEEEEEECCCCCCCCC GAKKGGQYPISGDGIAQDFVGGKVFFSPATGANAVEGEILAKYESLGGPVSSDLGFPIAN CCCCCCCCCCCCCCHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC ETDGGFGPSSRIVRFSAADKPVIFWAPDHGAFVVRGAMVAAWDKLRGPNGKLGAPVGDQT CCCCCCCCCCCEEEEECCCCCEEEEECCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCC VDGDVVSQKFTGGMISWNRAKNTFTTDPANLAPLLSGLQVSGQNQPSTSAMPPPGKKFTW CCCHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHCCEECCCCCCCCCCCCCCCCCEEE HWWWLGAAALGVLLVVMVALVVFGLRRRRRGYDAAAYDDDRAGDVEYGTAADGDWPPDED EHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC FGSEHFGFGDQFPPEPVAPDAGSTPRVSWPRGAGAAVGDAEHLPGEEGYGSDLLSGPSNV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHCCCCCC GVEEEDTDAVDTTPTPVVSQADLSEVGPDLIVPERVVPETFVPQAFVPEAVAPEAVPPDV CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHCCHHHCCCHHCCHHCCCCCCCCCC HAADLADTGLPAAAVSAAEDRGGRHAAAEPPEPPSAGVRPAIHLPLEDPYQMPNGYPVKA CHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEE SVSFGLYYPPGSALYHDTLAELWFASEEVAQVNGFIRAD EEEEEEEECCCCHHHHHHHHHHHHCHHHHHHHCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12948626 [H]