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The map label for this gene is secF [H]

Identifier: 121638471

GI number: 121638471

Start: 2877130

End: 2878458

Strand: Reverse

Name: secF [H]

Synonym: BCG_2609c

Alternate gene names: 121638471

Gene position: 2878458-2877130 (Counterclockwise)

Preceding gene: 121638472

Following gene: 121638470

Centisome position: 65.8

GC content: 65.84

Gene sequence:

>1329_bases
ATGGCGTCGAAAGCAAAGACCGGCCGCGACGACGAAGCCACGTCGGCGGTCGAACTCACCGAGGCCACCGAGAGTGCTGT
GGCGCGGACCGACGGCGACAGCACCACAGACACCGCCTCGAAGCTGGGGCACCATAGCTTCCTTTCGCGCCTGTACACCG
GCACCGGGGCGTTTGAGGTAGTGGGACGCCGCCGGTTGTGGTTTGGCGTGAGCGGTGCGATCGTCGCGGTGGCCATCGCC
AGCATCGTCTTTCGTGGGTTCACCTTCGGCATCGATTTCAAAGGCGGTACCACGGTGTCGTTCCCGCGTGGCAGCACCCA
AGTCGCGCAGGTCGAAGACGTCTACTACCGGGCCCTCGGCAGTGAGCCCCAGTCGGTGGTGATCGTCGGGGCCGGTGCTT
CGGCGACGGTGCAGATTCGTTCGGAGACGCTGACCAGCGACCAGACGGCCAAGCTGCGGGACGCCCTATTCGAGGCCTTC
GGGCCCAAGGGAACCGACGGTCAGCCCAGCAAGCAGGCCATCAGCGACTCGGCGGTGTCGGAGACCTGGGGCGGTCAGAT
CACCAAGAAGGCGGTGATCGCGCTGGTGGTGTTTCTGGTGCTGGTCGCCCTCTACATTACCGTGCGCTACGAGCGCTACA
TGACCATCTCGGCGATAACGGCCATGCTCTTCGACCTGACCGTCACCGCCGGCGTGTATTCCCTGGTGGGTTTCGAAGTC
ACCCCGGCCACGGTCATCGGCCTGCTGACCATTCTCGGGTTCTCGCTCTATGACACCGTCATCGTGTTCGACAAGGTCGA
GGAGAACACCCATGGCTTCCAGCACACCACCCGGCGCACCTTCGCCGAGCAGGCCAACCTGGCGATCAACCAGACGTTCA
TGCGGTCGATCAACACCAGCCTGATCGGCGTGTTGCCGGTGTTGACGCTGATGGTGGTGGCGGTCTGGCTGCTGGGCGTC
GGCACTCTCAAAGACCTGGCGCTGGTGCAGCTGATCGGCATCATCATCGGCACCTACTCGTCAATCTTCTTCGCCACGCC
GCTGTTGGTTACCCTCCGTGAGCGCACGGAGTTGGTGCGCAACCACACCCGTCGGGTGCTCAAACGGCGTAACTCCGGCT
CGCCGGCGGGATCAGAGGACGCCAGCACGGATGGCGGCGAGCAGCCGGCAGCCGCTGATGAACAGTCGCTGGTGGGGATC
ACGCAGGCCAGCAGCCAATCCGCCCCGCGGGCGGCCCAGGGCTCCAGCAAGCCGGCGCCGGGGGCGCGCCCAGTGCGTCC
CGTCGGTACCAGGCGTCCGCCCGGCAAGCGGAACGCCGGTCGGCGGTAG

Upstream 100 bases:

>100_bases
ATCGTCGCTGCTGGCCAAGCCGGCATACAACGGCCTGGGAGCGGTGCAGCAGGTCGCACGCGAACGCCGGGCCATGGCTC
GGACGGGACGGGGATAGCCG

Downstream 100 bases:

>100_bases
GCGCGGTGGCCCCCCGCCGCCGGCGTCATACGCGCATCGCCGGCCTGCGAGTCGTTGGTACCGCGACGTTGGTCGCCGCA
ACCACGCTGACCGCGTGTTC

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 441

Protein sequence:

>442_residues
MASKAKTGRDDEATSAVELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEVVGRRRLWFGVSGAIVAVAIA
SIVFRGFTFGIDFKGGTTVSFPRGSTQVAQVEDVYYRALGSEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAF
GPKGTDGQPSKQAISDSAVSETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEV
TPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTSLIGVLPVLTLMVVAVWLLGV
GTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVRNHTRRVLKRRNSGSPAGSEDASTDGGEQPAAADEQSLVGI
TQASSQSAPRAAQGSSKPAPGARPVRPVGTRRPPGKRNAGRR

Sequences:

>Translated_442_residues
MASKAKTGRDDEATSAVELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEVVGRRRLWFGVSGAIVAVAIA
SIVFRGFTFGIDFKGGTTVSFPRGSTQVAQVEDVYYRALGSEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAF
GPKGTDGQPSKQAISDSAVSETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEV
TPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTSLIGVLPVLTLMVVAVWLLGV
GTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVRNHTRRVLKRRNSGSPAGSEDASTDGGEQPAAADEQSLVGI
TQASSQSAPRAAQGSSKPAPGARPVRPVGTRRPPGKRNAGRR
>Mature_441_residues
ASKAKTGRDDEATSAVELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEVVGRRRLWFGVSGAIVAVAIAS
IVFRGFTFGIDFKGGTTVSFPRGSTQVAQVEDVYYRALGSEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFG
PKGTDGQPSKQAISDSAVSETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEVT
PATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTSLIGVLPVLTLMVVAVWLLGVG
TLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVRNHTRRVLKRRNSGSPAGSEDASTDGGEQPAAADEQSLVGIT
QASSQSAPRAAQGSSKPAPGARPVRPVGTRRPPGKRNAGRR

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=297, Percent_Identity=26.9360269360269, Blast_Score=103, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 47040; Mature: 46909

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASKAKTGRDDEATSAVELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHH
VGRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFPRGSTQVAQVEDVYYRALG
HCCHHEEECCHHHHHHHHHHHHHHHHHHEEEECCCCCEEECCCCCCHHHHHHHHHHHHHC
SEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDSAVS
CCCCEEEEEECCCCEEEEEECHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
ETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEV
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTS
CHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHH
LIGVLPVLTLMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NHTRRVLKRRNSGSPAGSEDASTDGGEQPAAADEQSLVGITQASSQSAPRAAQGSSKPAP
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEECCCCCCCCCCCCCCCCCCC
GARPVRPVGTRRPPGKRNAGRR
CCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ASKAKTGRDDEATSAVELTEATESAVARTDGDSTTDTASKLGHHSFLSRLYTGTGAFEV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHH
VGRRRLWFGVSGAIVAVAIASIVFRGFTFGIDFKGGTTVSFPRGSTQVAQVEDVYYRALG
HCCHHEEECCHHHHHHHHHHHHHHHHHHEEEECCCCCEEECCCCCCHHHHHHHHHHHHHC
SEPQSVVIVGAGASATVQIRSETLTSDQTAKLRDALFEAFGPKGTDGQPSKQAISDSAVS
CCCCEEEEEECCCCEEEEEECHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
ETWGGQITKKAVIALVVFLVLVALYITVRYERYMTISAITAMLFDLTVTAGVYSLVGFEV
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TPATVIGLLTILGFSLYDTVIVFDKVEENTHGFQHTTRRTFAEQANLAINQTFMRSINTS
CHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHH
LIGVLPVLTLMVVAVWLLGVGTLKDLALVQLIGIIIGTYSSIFFATPLLVTLRERTELVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NHTRRVLKRRNSGSPAGSEDASTDGGEQPAAADEQSLVGITQASSQSAPRAAQGSSKPAP
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEECCCCCCCCCCCCCCCCCCC
GARPVRPVGTRRPPGKRNAGRR
CCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]