| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is yxiO [H]
Identifier: 121638390
GI number: 121638390
Start: 2787052
End: 2788389
Strand: Reverse
Name: yxiO [H]
Synonym: BCG_2528c
Alternate gene names: 121638390
Gene position: 2788389-2787052 (Counterclockwise)
Preceding gene: 121638392
Following gene: 121638387
Centisome position: 63.74
GC content: 67.26
Gene sequence:
>1338_bases ATGAATAACCCGGGGTCGCGCGCGGGCACCCTCCTGCACTTCCGGGTGGTGGCGTGGGCCATGTGGGATTGCGGTTCCAC CGGTCTGAACGCGATCGTGACAACCTTTGTGTTCTCCGTCTACCTGACCAGCGCCGTGGGTCAGGGTCTGCCGGGCGGCA CCTCACCGGCGAGTTGGTTGGGTCGTGCGGGGGCGGTCGCCGGGTTGACCATCGGGGTGCTGGCGCCCGTCGTCGGCGTG TGGGTGGAGTCTCCGCACCGCCGTCGGGTGGCACTGTCTGTGCTGACCGGCACCGCGGTCGCGCTGACCTGCGCAATGTT CCTGATCCGCGACGACCCCCGCTACCTGTGGGCCGGGCTGGTTTTGCTCGCGGCCACCGCGGCGTCCAGCGATTTGTCCA GCGTTCCGTACAACGCGATGCTGCGCCAACTGTCCACACCCAGCACGGCGGGCCGGATCTCCGGCTTCGGTTGGGCGTCG GGCTATGTCGGCAGCGTCGCGCTCTTGCTGGTGATCTATCTGGGTTTCATGTCAGGTAGCGGTTCGCAGCGCGGCCTGCT GCAGCTACCCGTCGCGAACGGACTCAACGTGCGAATGGCGATGCTGGTTGCGGCGGCCTGGTTGGCGTTGCTGGGCCTGC CATTGTTGTTGGTCGCGCACCGACTACCCGATTCCGGTGCGGCGTCTCATCCTTCGACCGGCCTGCTGGGCGGCTACCGC AAGCTGTGGACGGAGATCAGCGCGGAGTGGCGGCGCGACCGCAACTTGGTCTACTTCCTGGTGGCCAGCGCGATATTCCG CGACGGGCTGGCGGCCATTTTCGCCTTCGGCGCGGTACTTGGCGTCAACGCATACGGGCTCACCCAGGCCGATGTCCTGA TCTTTGGTGCGGCCGCAAGCGTGGTGGCTGCGGTGGGGGCCGTGCTGGGTGGGTTCGTCGACCACCGGATCGGGTCCAAA CCGGTCATCGTCGGATCACTGGCCGCCATCATCGCCGCGGCGCTCACGTTGCTGACGTTGTCGGGCCCAACGGCGTTCTG GGCGTGCGGGCTGCTGTTGTGTGTGTTCATCGGGCCGGCGCAGTCGTCGGCACGCGCTCTGCTGCTGCATATGGCGCAGC ACGGCAAGGAGGGTGTGGCCTTTGGGCTCTACACGATGACCGGCCGGGCGGTGTCGTTTCTGGGGCCGTGGTTGTTTTCG GTCTTCGTCGACGTGTTCCACACGGTCCGTGCCGGGCTCGGCGGCGTGTGCCTCGTGTTGACAACCGGCCTGCTGCTCAT GCTGCGGGTACAGGTGTCGCGGCACGGCGGTGCGCTGACGACGGCGCAATCCTCCTAG
Upstream 100 bases:
>100_bases GCGCGGGTATCGGCATGCGCCAATCGTAGACACGTAGCGATCGCGAGCGCGGCGGAGCCGGGCGCAGCGGGTCGCTGCCA AAAGCAATAAAGTGCCGGAC
Downstream 100 bases:
>100_bases CTGGGAGCGTCGCAGATGGTCAACCCCGCCCCGGTGCGCTGGCGTACCTGAACCCCGGCCACGGTGACCGAGCAGGTGAC GTTGTGGCCGATGTTGACGA
Product: putative integral membrane leucine and alanine rich protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MNNPGSRAGTLLHFRVVAWAMWDCGSTGLNAIVTTFVFSVYLTSAVGQGLPGGTSPASWLGRAGAVAGLTIGVLAPVVGV WVESPHRRRVALSVLTGTAVALTCAMFLIRDDPRYLWAGLVLLAATAASSDLSSVPYNAMLRQLSTPSTAGRISGFGWAS GYVGSVALLLVIYLGFMSGSGSQRGLLQLPVANGLNVRMAMLVAAAWLALLGLPLLLVAHRLPDSGAASHPSTGLLGGYR KLWTEISAEWRRDRNLVYFLVASAIFRDGLAAIFAFGAVLGVNAYGLTQADVLIFGAAASVVAAVGAVLGGFVDHRIGSK PVIVGSLAAIIAAALTLLTLSGPTAFWACGLLLCVFIGPAQSSARALLLHMAQHGKEGVAFGLYTMTGRAVSFLGPWLFS VFVDVFHTVRAGLGGVCLVLTTGLLLMLRVQVSRHGGALTTAQSS
Sequences:
>Translated_445_residues MNNPGSRAGTLLHFRVVAWAMWDCGSTGLNAIVTTFVFSVYLTSAVGQGLPGGTSPASWLGRAGAVAGLTIGVLAPVVGV WVESPHRRRVALSVLTGTAVALTCAMFLIRDDPRYLWAGLVLLAATAASSDLSSVPYNAMLRQLSTPSTAGRISGFGWAS GYVGSVALLLVIYLGFMSGSGSQRGLLQLPVANGLNVRMAMLVAAAWLALLGLPLLLVAHRLPDSGAASHPSTGLLGGYR KLWTEISAEWRRDRNLVYFLVASAIFRDGLAAIFAFGAVLGVNAYGLTQADVLIFGAAASVVAAVGAVLGGFVDHRIGSK PVIVGSLAAIIAAALTLLTLSGPTAFWACGLLLCVFIGPAQSSARALLLHMAQHGKEGVAFGLYTMTGRAVSFLGPWLFS VFVDVFHTVRAGLGGVCLVLTTGLLLMLRVQVSRHGGALTTAQSS >Mature_445_residues MNNPGSRAGTLLHFRVVAWAMWDCGSTGLNAIVTTFVFSVYLTSAVGQGLPGGTSPASWLGRAGAVAGLTIGVLAPVVGV WVESPHRRRVALSVLTGTAVALTCAMFLIRDDPRYLWAGLVLLAATAASSDLSSVPYNAMLRQLSTPSTAGRISGFGWAS GYVGSVALLLVIYLGFMSGSGSQRGLLQLPVANGLNVRMAMLVAAAWLALLGLPLLLVAHRLPDSGAASHPSTGLLGGYR KLWTEISAEWRRDRNLVYFLVASAIFRDGLAAIFAFGAVLGVNAYGLTQADVLIFGAAASVVAAVGAVLGGFVDHRIGSK PVIVGSLAAIIAAALTLLTLSGPTAFWACGLLLCVFIGPAQSSARALLLHMAQHGKEGVAFGLYTMTGRAVSFLGPWLFS VFVDVFHTVRAGLGGVCLVLTTGLLLMLRVQVSRHGGALTTAQSS
Specific function: Unknown
COG id: COG2270
COG function: function code R; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46075; Mature: 46075
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNPGSRAGTLLHFRVVAWAMWDCGSTGLNAIVTTFVFSVYLTSAVGQGLPGGTSPASWL CCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH GRAGAVAGLTIGVLAPVVGVWVESPHRRRVALSVLTGTAVALTCAMFLIRDDPRYLWAGL HCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH VLLAATAASSDLSSVPYNAMLRQLSTPSTAGRISGFGWASGYVGSVALLLVIYLGFMSGS HHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC GSQRGLLQLPVANGLNVRMAMLVAAAWLALLGLPLLLVAHRLPDSGAASHPSTGLLGGYR CCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH KLWTEISAEWRRDRNLVYFLVASAIFRDGLAAIFAFGAVLGVNAYGLTQADVLIFGAAAS HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEHHHHH VVAAVGAVLGGFVDHRIGSKPVIVGSLAAIIAAALTLLTLSGPTAFWACGLLLCVFIGPA HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC QSSARALLLHMAQHGKEGVAFGLYTMTGRAVSFLGPWLFSVFVDVFHTVRAGLGGVCLVL CHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH TTGLLLMLRVQVSRHGGALTTAQSS HHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MNNPGSRAGTLLHFRVVAWAMWDCGSTGLNAIVTTFVFSVYLTSAVGQGLPGGTSPASWL CCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH GRAGAVAGLTIGVLAPVVGVWVESPHRRRVALSVLTGTAVALTCAMFLIRDDPRYLWAGL HCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH VLLAATAASSDLSSVPYNAMLRQLSTPSTAGRISGFGWASGYVGSVALLLVIYLGFMSGS HHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC GSQRGLLQLPVANGLNVRMAMLVAAAWLALLGLPLLLVAHRLPDSGAASHPSTGLLGGYR CCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH KLWTEISAEWRRDRNLVYFLVASAIFRDGLAAIFAFGAVLGVNAYGLTQADVLIFGAAAS HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEHHHHH VVAAVGAVLGGFVDHRIGSKPVIVGSLAAIIAAALTLLTLSGPTAFWACGLLLCVFIGPA HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC QSSARALLLHMAQHGKEGVAFGLYTMTGRAVSFLGPWLFSVFVDVFHTVRAGLGGVCLVL CHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH TTGLLLMLRVQVSRHGGALTTAQSS HHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]