| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is yjjK [C]
Identifier: 121638360
GI number: 121638360
Start: 2747533
End: 2749209
Strand: Reverse
Name: yjjK [C]
Synonym: BCG_2497c
Alternate gene names: 121638360
Gene position: 2749209-2747533 (Counterclockwise)
Preceding gene: 121638361
Following gene: 121638359
Centisome position: 62.85
GC content: 62.67
Gene sequence:
>1677_bases ATGGCTGAGTTCATCTACACGATGAAGAAGGTCCGCAAGGCGCACGGCGATAAGGTGATCCTCGACGACGTGACGTTGAG TTTCTATCCGGGCGCCAAGATCGGTGTCGTCGGCCCCAACGGGGCCGGTAAGTCGAGCGTCTTGCGGATCATGGCCGGTT TGGACAAGCCGAACAACGGCGATGCCTTCCTGGCCACCGGCGCCACCGTGGGCATCCTGCAACAGGAACCGCCGCTGAAC GAGGACAAGACCGTTCGCGGCAATGTGGAAGAGGGCATGGGGGACATCAAGATCAAGCTCGACCGCTTCAACGAGGTCGC CGAATTGATGGCCACCGACTACACCGACGAGCTGATGGAAGAGATGGGTCGGCTGCAAGAGGAACTGGACCACGCCGACG CGTGGGACCTCGACGCGCAGCTCGAGCAGGCCATGGATGCGCTGCGCTGTCCGCCGGCCGACGAGCCGGTAACCAACCTA TCCGGTGGCGAGCGTCGCCGGGTGGCGCTGTGCAAACTGCTGTTGTCCAAACCCGACCTGTTGTTGCTCGACGAGCCGAC CAACCACCTAGACGCGGAAAGTGTGCAGTGGCTCGAACAGCATCTGGCCAGCTACCCCGGTGCGATCCTGGCGGTCACCC ACGACCGTTACTTCCTGGACAACGTCGCGGAATGGATCCTGGAGCTCGATCGTGGCCGCGCCTACCCCTATGAGGGCAAC TACTCGACCTATCTGGAGAAAAAAGCCGAGCGGCTCGCGGTGCAAGGCCGCAAGGACGCGAAGCTGCAAAAGCGGTTGAC CGAGGAGTTGGCTTGGGTCCGGTCCGGGGCCAAGGCGCGCCAGGCCAAAAGCAAGGCGCGCCTGCAGCGCTACGAGGAGA TGGCAGCCGAGGCGGAGAAGACCCGCAAGCTCGACTTCGAGGAGATTCAGATCCCGGTCGGGCCCCGCCTAGGCAACGTG GTGGTTGAGGTCGACCACCTCGATAAGGGCTACGACGGGCGCGCCCTGATCAAGGACCTGTCGTTCAGCTTGCCCCGCAA TGGCATCGTCGGCGTCATTGGGCCCAACGGGGTAGGCAAGACCACACTGTTCAAAACCATCGTCGGGCTCGAGAAACCGG ACAGCGGCAGCGTCAAGGTCGGCGAGACCGTCAAGCTGAGTTACGTGGACCAGGCCCGTGCTGGCATCGATCCGCGGAAG ACCGTCTGGGAGGTTGTCTCGGACGGTCTGGACTATATCCAGGTCGGTCAAACCGAAGTGCCGTCACGGGCCTACGTGTC GGCATTCGGGTTTAAGGGACCGGACCAGCAAAAACCGGCCGGTGTGCTATCCGGCGGGGAGCGCAACAGGCTCAACCTTG CGTTGACGCTCAAACAGGGCGGCAACCTGATTCTGCTCGACGAACCGACGAACGACCTGGATGTCGAGACTCTGGGTTCG CTGGAGAATGCTCTGCTGAACTTCCCCGGCTGCGCCGTGGTGATTTCGCACGATCGCTGGTTTCTTGACCGCACGTGCAC GCACATCCTGGCGTGGGAGGGTGACGACGACAACGAGGCGAAGTGGTTCTGGTTCGAGGGCAACTTCGGCGCCTACGAGG AGAACAAGGTGGAACGGCTCGGTGTCGACGCCGCTCGACCGCATAGGGTCACCCACCGCAAGCTGACGCGCGGCTAA
Upstream 100 bases:
>100_bases CCCTGCCCATATCGGCTTAGGGGTCGCCTCGATGCTGCCCCGGCGGTGCCTAGGATGGTTCGCGAGGTAACCCGAAGGAC CAGAAAGGCAACACCGCGGC
Downstream 100 bases:
>100_bases TGTTAGCTTCGCCCACGCCCCGTGACGATGCGTCCGGAACGCCGCACCCAGGAGCGGGAAAATTGAATCGAGCGGTACCC GTCGTGAGTTGGGAGCAATC
Product: putative ABC transporter ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 558; Mature: 557
Protein sequence:
>558_residues MAEFIYTMKKVRKAHGDKVILDDVTLSFYPGAKIGVVGPNGAGKSSVLRIMAGLDKPNNGDAFLATGATVGILQQEPPLN EDKTVRGNVEEGMGDIKIKLDRFNEVAELMATDYTDELMEEMGRLQEELDHADAWDLDAQLEQAMDALRCPPADEPVTNL SGGERRRVALCKLLLSKPDLLLLDEPTNHLDAESVQWLEQHLASYPGAILAVTHDRYFLDNVAEWILELDRGRAYPYEGN YSTYLEKKAERLAVQGRKDAKLQKRLTEELAWVRSGAKARQAKSKARLQRYEEMAAEAEKTRKLDFEEIQIPVGPRLGNV VVEVDHLDKGYDGRALIKDLSFSLPRNGIVGVIGPNGVGKTTLFKTIVGLEKPDSGSVKVGETVKLSYVDQARAGIDPRK TVWEVVSDGLDYIQVGQTEVPSRAYVSAFGFKGPDQQKPAGVLSGGERNRLNLALTLKQGGNLILLDEPTNDLDVETLGS LENALLNFPGCAVVISHDRWFLDRTCTHILAWEGDDDNEAKWFWFEGNFGAYEENKVERLGVDAARPHRVTHRKLTRG
Sequences:
>Translated_558_residues MAEFIYTMKKVRKAHGDKVILDDVTLSFYPGAKIGVVGPNGAGKSSVLRIMAGLDKPNNGDAFLATGATVGILQQEPPLN EDKTVRGNVEEGMGDIKIKLDRFNEVAELMATDYTDELMEEMGRLQEELDHADAWDLDAQLEQAMDALRCPPADEPVTNL SGGERRRVALCKLLLSKPDLLLLDEPTNHLDAESVQWLEQHLASYPGAILAVTHDRYFLDNVAEWILELDRGRAYPYEGN YSTYLEKKAERLAVQGRKDAKLQKRLTEELAWVRSGAKARQAKSKARLQRYEEMAAEAEKTRKLDFEEIQIPVGPRLGNV VVEVDHLDKGYDGRALIKDLSFSLPRNGIVGVIGPNGVGKTTLFKTIVGLEKPDSGSVKVGETVKLSYVDQARAGIDPRK TVWEVVSDGLDYIQVGQTEVPSRAYVSAFGFKGPDQQKPAGVLSGGERNRLNLALTLKQGGNLILLDEPTNDLDVETLGS LENALLNFPGCAVVISHDRWFLDRTCTHILAWEGDDDNEAKWFWFEGNFGAYEENKVERLGVDAARPHRVTHRKLTRG >Mature_557_residues AEFIYTMKKVRKAHGDKVILDDVTLSFYPGAKIGVVGPNGAGKSSVLRIMAGLDKPNNGDAFLATGATVGILQQEPPLNE DKTVRGNVEEGMGDIKIKLDRFNEVAELMATDYTDELMEEMGRLQEELDHADAWDLDAQLEQAMDALRCPPADEPVTNLS GGERRRVALCKLLLSKPDLLLLDEPTNHLDAESVQWLEQHLASYPGAILAVTHDRYFLDNVAEWILELDRGRAYPYEGNY STYLEKKAERLAVQGRKDAKLQKRLTEELAWVRSGAKARQAKSKARLQRYEEMAAEAEKTRKLDFEEIQIPVGPRLGNVV VEVDHLDKGYDGRALIKDLSFSLPRNGIVGVIGPNGVGKTTLFKTIVGLEKPDSGSVKVGETVKLSYVDQARAGIDPRKT VWEVVSDGLDYIQVGQTEVPSRAYVSAFGFKGPDQQKPAGVLSGGERNRLNLALTLKQGGNLILLDEPTNDLDVETLGSL ENALLNFPGCAVVISHDRWFLDRTCTHILAWEGDDDNEAKWFWFEGNFGAYEENKVERLGVDAARPHRVTHRKLTRG
Specific function: Probably part of an ABC transporter complex. Probably responsible for energy coupling to the transport system [H]
COG id: COG0488
COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI148612853, Length=517, Percent_Identity=30.3675048355899, Blast_Score=200, Evalue=4e-51, Organism=Homo sapiens, GI10947137, Length=556, Percent_Identity=27.8776978417266, Blast_Score=175, Evalue=1e-43, Organism=Homo sapiens, GI27881506, Length=550, Percent_Identity=27.6363636363636, Blast_Score=175, Evalue=1e-43, Organism=Homo sapiens, GI10947135, Length=572, Percent_Identity=28.3216783216783, Blast_Score=172, Evalue=5e-43, Organism=Homo sapiens, GI69354671, Length=572, Percent_Identity=28.4965034965035, Blast_Score=172, Evalue=8e-43, Organism=Escherichia coli, GI2367384, Length=561, Percent_Identity=56.6844919786096, Blast_Score=619, Evalue=1e-178, Organism=Escherichia coli, GI1787182, Length=502, Percent_Identity=36.6533864541833, Blast_Score=329, Evalue=3e-91, Organism=Escherichia coli, GI1787041, Length=513, Percent_Identity=31.7738791423002, Blast_Score=242, Evalue=4e-65, Organism=Escherichia coli, GI1789751, Length=543, Percent_Identity=30.7550644567219, Blast_Score=238, Evalue=1e-63, Organism=Escherichia coli, GI48994943, Length=490, Percent_Identity=23.8775510204082, Blast_Score=92, Evalue=7e-20, Organism=Escherichia coli, GI1788225, Length=204, Percent_Identity=27.4509803921569, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI87081791, Length=170, Percent_Identity=30.5882352941176, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI87081709, Length=195, Percent_Identity=26.6666666666667, Blast_Score=73, Evalue=5e-14, Organism=Escherichia coli, GI1789891, Length=228, Percent_Identity=24.5614035087719, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI48994883, Length=234, Percent_Identity=28.2051282051282, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI1787370, Length=181, Percent_Identity=28.1767955801105, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI87081782, Length=208, Percent_Identity=29.8076923076923, Blast_Score=69, Evalue=9e-13, Organism=Escherichia coli, GI1788761, Length=200, Percent_Identity=28.5, Blast_Score=69, Evalue=9e-13, Organism=Escherichia coli, GI1787758, Length=172, Percent_Identity=27.3255813953488, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1788165, Length=185, Percent_Identity=30.2702702702703, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1786563, Length=190, Percent_Identity=27.8947368421053, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1789593, Length=224, Percent_Identity=27.6785714285714, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1787164, Length=180, Percent_Identity=28.8888888888889, Blast_Score=66, Evalue=6e-12, Organism=Escherichia coli, GI87081834, Length=222, Percent_Identity=28.3783783783784, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17559834, Length=553, Percent_Identity=28.9330922242315, Blast_Score=211, Evalue=8e-55, Organism=Caenorhabditis elegans, GI17555318, Length=537, Percent_Identity=27.0018621973929, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI17553372, Length=513, Percent_Identity=31.1890838206628, Blast_Score=191, Evalue=8e-49, Organism=Caenorhabditis elegans, GI115534520, Length=233, Percent_Identity=26.6094420600858, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI193211015, Length=197, Percent_Identity=26.9035532994924, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI193211017, Length=197, Percent_Identity=26.9035532994924, Blast_Score=70, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17569143, Length=226, Percent_Identity=29.646017699115, Blast_Score=69, Evalue=6e-12, Organism=Caenorhabditis elegans, GI71996809, Length=246, Percent_Identity=26.0162601626016, Blast_Score=69, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17541710, Length=209, Percent_Identity=25.8373205741627, Blast_Score=68, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6320874, Length=509, Percent_Identity=29.0766208251473, Blast_Score=190, Evalue=6e-49, Organism=Saccharomyces cerevisiae, GI6321121, Length=540, Percent_Identity=27.962962962963, Blast_Score=186, Evalue=9e-48, Organism=Saccharomyces cerevisiae, GI6323278, Length=388, Percent_Identity=27.0618556701031, Blast_Score=124, Evalue=3e-29, Organism=Saccharomyces cerevisiae, GI6324314, Length=386, Percent_Identity=26.4248704663212, Blast_Score=121, Evalue=3e-28, Organism=Saccharomyces cerevisiae, GI6325030, Length=384, Percent_Identity=26.5625, Blast_Score=109, Evalue=1e-24, Organism=Drosophila melanogaster, GI24666836, Length=517, Percent_Identity=29.5938104448743, Blast_Score=197, Evalue=2e-50, Organism=Drosophila melanogaster, GI24642252, Length=519, Percent_Identity=28.5163776493256, Blast_Score=191, Evalue=1e-48, Organism=Drosophila melanogaster, GI18859989, Length=519, Percent_Identity=28.5163776493256, Blast_Score=191, Evalue=1e-48, Organism=Drosophila melanogaster, GI24641342, Length=596, Percent_Identity=27.6845637583893, Blast_Score=183, Evalue=3e-46, Organism=Drosophila melanogaster, GI24648314, Length=165, Percent_Identity=33.3333333333333, Blast_Score=75, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022374 - InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR007406 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 61921; Mature: 61790
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEFIYTMKKVRKAHGDKVILDDVTLSFYPGAKIGVVGPNGAGKSSVLRIMAGLDKPNNG CCHHHHHHHHHHHHCCCEEEEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCC DAFLATGATVGILQQEPPLNEDKTVRGNVEEGMGDIKIKLDRFNEVAELMATDYTDELME CEEEECCCEEEEEECCCCCCCCCCCCCCHHHCCCCEEEEEHHHHHHHHHHHCCCHHHHHH EMGRLQEELDHADAWDLDAQLEQAMDALRCPPADEPVTNLSGGERRRVALCKLLLSKPDL HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCE LLLDEPTNHLDAESVQWLEQHLASYPGAILAVTHDRYFLDNVAEWILELDRGRAYPYEGN EEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCC YSTYLEKKAERLAVQGRKDAKLQKRLTEELAWVRSGAKARQAKSKARLQRYEEMAAEAEK HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH TRKLDFEEIQIPVGPRLGNVVVEVDHLDKGYDGRALIKDLSFSLPRNGIVGVIGPNGVGK HHCCCHHHEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCH TTLFKTIVGLEKPDSGSVKVGETVKLSYVDQARAGIDPRKTVWEVVSDGLDYIQVGQTEV HHHHHHHHCCCCCCCCCEEECCEEEEEEHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCC PSRAYVSAFGFKGPDQQKPAGVLSGGERNRLNLALTLKQGGNLILLDEPTNDLDVETLGS CCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEECCCCCCCHHHHHH LENALLNFPGCAVVISHDRWFLDRTCTHILAWEGDDDNEAKWFWFEGNFGAYEENKVERL HHHHHHCCCCEEEEEECCCEEHHHHEEEEEEECCCCCCCEEEEEEECCCCCCCCCCHHHH GVDAARPHRVTHRKLTRG CCCCCCCCHHHHHHHCCC >Mature Secondary Structure AEFIYTMKKVRKAHGDKVILDDVTLSFYPGAKIGVVGPNGAGKSSVLRIMAGLDKPNNG CHHHHHHHHHHHHCCCEEEEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCC DAFLATGATVGILQQEPPLNEDKTVRGNVEEGMGDIKIKLDRFNEVAELMATDYTDELME CEEEECCCEEEEEECCCCCCCCCCCCCCHHHCCCCEEEEEHHHHHHHHHHHCCCHHHHHH EMGRLQEELDHADAWDLDAQLEQAMDALRCPPADEPVTNLSGGERRRVALCKLLLSKPDL HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCE LLLDEPTNHLDAESVQWLEQHLASYPGAILAVTHDRYFLDNVAEWILELDRGRAYPYEGN EEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCC YSTYLEKKAERLAVQGRKDAKLQKRLTEELAWVRSGAKARQAKSKARLQRYEEMAAEAEK HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH TRKLDFEEIQIPVGPRLGNVVVEVDHLDKGYDGRALIKDLSFSLPRNGIVGVIGPNGVGK HHCCCHHHEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCH TTLFKTIVGLEKPDSGSVKVGETVKLSYVDQARAGIDPRKTVWEVVSDGLDYIQVGQTEV HHHHHHHHCCCCCCCCCEEECCEEEEEEHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCC PSRAYVSAFGFKGPDQQKPAGVLSGGERNRLNLALTLKQGGNLILLDEPTNDLDVETLGS CCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEECCCCCCCHHHHHH LENALLNFPGCAVVISHDRWFLDRTCTHILAWEGDDDNEAKWFWFEGNFGAYEENKVERL HHHHHHCCCCEEEEEECCCEEHHHHEEEEEEECCCCCCCEEEEEEECCCCCCCCCCHHHH GVDAARPHRVTHRKLTRG CCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]