| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is korB [H]
Identifier: 121638337
GI number: 121638337
Start: 2718795
End: 2719916
Strand: Reverse
Name: korB [H]
Synonym: BCG_2474c
Alternate gene names: 121638337
Gene position: 2719916-2718795 (Counterclockwise)
Preceding gene: 121638338
Following gene: 121638336
Centisome position: 62.18
GC content: 64.08
Gene sequence:
>1122_bases ATGACCCGCTCCGGCGATGAAGCACAGCTCATGACCGGCGTGACCGGTGATTTGGCGGGCACCGAGCTCGGCCTGACTCC GAGCTTGACCAAGAACGCTGGGGTGCCCACCACGGATCAGCCGCAGAAGGGCAAGGATTTCACCAGTGACCAGGAGGTGC GCTGGTGCCCGGGCTGCGGCGACTACGTCATCCTCAACACCATCCGAAACTTCCTGCCCGAACTGGGGCTGCGGCGTGAG AACATCGTGTTCATCAGCGGTATCGGATGCTCCAGCCGGTTCCCCTATTACCTGGAAACCTACGGCTTTCATTCGATTCA CGGCCGCGCGCCCGCGATAGCGACCGGTCTGGCGCTGGCTCGCGAGGATCTGTCGGTATGGGTGGTCACCGGCGACGGTG ACGCCTTGTCGATCGGCGGTAACCACCTGATCCACGCGCTGCGCCGCAACATCAACGTGACGATTCTGCTGTTCAACAAC CGGATCTATGGGCTGACCAAAGGACAGTATTCGCCGACATCGGAGGTCGGCAAGGTCACCAAGTCGACACCGATGGGCTC GCTGGATCACCCGTTCAATCCGGTGTCGTTGGCGCTGGGGGCAGAGGCGACGTTCGTTGGCCGCGCGCTGGACTCAGACC GTAACGGGCTGACCGAAGTGCTGCGTGCCGCGGCCCAGCATCGCGGTGCTGCCCTGGTCGAAATCCTGCAGGACTGCCCG ATCTTCAACGACGGCTCGTTCGATGCGCTGCGCAAGGAGGGCGCCGAGGAGCGGGTCATCAAGGTCCGCCACGGCGAGCC GATCGTCTTCGGGGCCAACGGCGAATACTGCGTGGTCAAGTCCGGATTCGGCCTCGAAGTGGCCAAGACGGCCGATGTGG CCATCGACGAGATCATTGTGCACGATGCGCAGGTCGACGACCCGGCCTACGCCTTCGCGCTGTCCCGGCTGTCCGATCAG AACCTGGACCACACCGTGCTGGGAATCTTTCGGCACATCAGCCGGCCAACCTACGATGATGCGGCCCGCTCGCAGGTAGT CGCGGCCCGAAACGCCGCCCCGTCCGGCACCGCTGCACTGCAGTCACTGTTGCACGGGCGCGACACTTGGACCGTCGACT GA
Upstream 100 bases:
>100_bases TTATCCGGGCCGCACTTGCCGGGAGATTGGCCGAGCTTGAGCAAGACAAGACGTTGGTCGCCAGATTGTCGGCGGCCACG GCGGGAGCGGGAGCAAACGG
Downstream 100 bases:
>100_bases CGTGGCTGAGCTCGCGCCCGACACAGTGCCGCTGGCCGGGGTTGTTCTCGCGGGAGGTGAATCCCGCCGAATGGGTCGCG ACAAAGCCACCCTGCCCCTC
Product: 2-oxoglutarate ferredoxin oxidoreductase subunit beta
Products: NA
Alternate protein names: 2-ketoglutarate oxidoreductase beta chain; KOR; 2-oxoglutarate-ferredoxin oxidoreductase subunit beta [H]
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MTRSGDEAQLMTGVTGDLAGTELGLTPSLTKNAGVPTTDQPQKGKDFTSDQEVRWCPGCGDYVILNTIRNFLPELGLRRE NIVFISGIGCSSRFPYYLETYGFHSIHGRAPAIATGLALAREDLSVWVVTGDGDALSIGGNHLIHALRRNINVTILLFNN RIYGLTKGQYSPTSEVGKVTKSTPMGSLDHPFNPVSLALGAEATFVGRALDSDRNGLTEVLRAAAQHRGAALVEILQDCP IFNDGSFDALRKEGAEERVIKVRHGEPIVFGANGEYCVVKSGFGLEVAKTADVAIDEIIVHDAQVDDPAYAFALSRLSDQ NLDHTVLGIFRHISRPTYDDAARSQVVAARNAAPSGTAALQSLLHGRDTWTVD
Sequences:
>Translated_373_residues MTRSGDEAQLMTGVTGDLAGTELGLTPSLTKNAGVPTTDQPQKGKDFTSDQEVRWCPGCGDYVILNTIRNFLPELGLRRE NIVFISGIGCSSRFPYYLETYGFHSIHGRAPAIATGLALAREDLSVWVVTGDGDALSIGGNHLIHALRRNINVTILLFNN RIYGLTKGQYSPTSEVGKVTKSTPMGSLDHPFNPVSLALGAEATFVGRALDSDRNGLTEVLRAAAQHRGAALVEILQDCP IFNDGSFDALRKEGAEERVIKVRHGEPIVFGANGEYCVVKSGFGLEVAKTADVAIDEIIVHDAQVDDPAYAFALSRLSDQ NLDHTVLGIFRHISRPTYDDAARSQVVAARNAAPSGTAALQSLLHGRDTWTVD >Mature_372_residues TRSGDEAQLMTGVTGDLAGTELGLTPSLTKNAGVPTTDQPQKGKDFTSDQEVRWCPGCGDYVILNTIRNFLPELGLRREN IVFISGIGCSSRFPYYLETYGFHSIHGRAPAIATGLALAREDLSVWVVTGDGDALSIGGNHLIHALRRNINVTILLFNNR IYGLTKGQYSPTSEVGKVTKSTPMGSLDHPFNPVSLALGAEATFVGRALDSDRNGLTEVLRAAAQHRGAALVEILQDCPI FNDGSFDALRKEGAEERVIKVRHGEPIVFGANGEYCVVKSGFGLEVAKTADVAIDEIIVHDAQVDDPAYAFALSRLSDQN LDHTVLGIFRHISRPTYDDAARSQVVAARNAAPSGTAALQSLLHGRDTWTVD
Specific function: Oxidoreductase Required For The Transfer Of Electrons From Pyruvate To Flavodoxin (Potential). [C]
COG id: COG1013
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C [H]
EC number: =1.2.7.3 [H]
Molecular weight: Translated: 40144; Mature: 40012
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSGDEAQLMTGVTGDLAGTELGLTPSLTKNAGVPTTDQPQKGKDFTSDQEVRWCPGCG CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC DYVILNTIRNFLPELGLRRENIVFISGIGCSSRFPYYLETYGFHSIHGRAPAIATGLALA CEEHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHE REDLSVWVVTGDGDALSIGGNHLIHALRRNINVTILLFNNRIYGLTKGQYSPTSEVGKVT ECCCEEEEEECCCCEEEECHHHHHHHHHHCCCEEEEEECCEEEEEECCCCCCHHHHHHHH KSTPMGSLDHPFNPVSLALGAEATFVGRALDSDRNGLTEVLRAAAQHRGAALVEILQDCP CCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHCC IFNDGSFDALRKEGAEERVIKVRHGEPIVFGANGEYCVVKSGFGLEVAKTADVAIDEIIV CCCCCCHHHHHHCCCHHCEEEEECCCEEEECCCCCEEEEECCCCEEEECHHHHHHHHHHE HDAQVDDPAYAFALSRLSDQNLDHTVLGIFRHISRPTYDDAARSQVVAARNAAPSGTAAL ECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHH QSLLHGRDTWTVD HHHHCCCCCCCCC >Mature Secondary Structure TRSGDEAQLMTGVTGDLAGTELGLTPSLTKNAGVPTTDQPQKGKDFTSDQEVRWCPGCG CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC DYVILNTIRNFLPELGLRRENIVFISGIGCSSRFPYYLETYGFHSIHGRAPAIATGLALA CEEHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHE REDLSVWVVTGDGDALSIGGNHLIHALRRNINVTILLFNNRIYGLTKGQYSPTSEVGKVT ECCCEEEEEECCCCEEEECHHHHHHHHHHCCCEEEEEECCEEEEEECCCCCCHHHHHHHH KSTPMGSLDHPFNPVSLALGAEATFVGRALDSDRNGLTEVLRAAAQHRGAALVEILQDCP CCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHCC IFNDGSFDALRKEGAEERVIKVRHGEPIVFGANGEYCVVKSGFGLEVAKTADVAIDEIIV CCCCCCHHHHHHCCCHHCEEEEECCCEEEECCCCCEEEEECCCCEEEECHHHHHHHHHHE HDAQVDDPAYAFALSRLSDQNLDHTVLGIFRHISRPTYDDAARSQVVAARNAAPSGTAAL ECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHH QSLLHGRDTWTVD HHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]