| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121638332
Identifier: 121638332
GI number: 121638332
Start: 2715483
End: 2716742
Strand: Reverse
Name: 121638332
Synonym: BCG_2469c
Alternate gene names: NA
Gene position: 2716742-2715483 (Counterclockwise)
Preceding gene: 121638333
Following gene: 121638331
Centisome position: 62.1
GC content: 68.25
Gene sequence:
>1260_bases GTGACCGCTACGCCGCGTGAATTCGACATCGTGTTGTACGGGGCGACCGGCTTCGTCGGCAAGCTGACCGCCGAATACCT GGCCCGGGCCGGGGGAGATGCCCGGATCGCGCTGGCCGGCAGGTCGACGCAACGGGTGCTCGCCGTTCGCGAAGCCCTGG GCGAATCCGCGCAGACCTGGCCGATCCTGACCGCCGACGCGTCGTTGCCGTCGACGCTGCAAGCCATGGCCGCCCGCGCC CAGGTCGTGGTCACCACCGTTGGGCCCTACACTCGCTACGGGCTGCCGCTGGTGGCCGCATGCGCTGCCGCCGGCACCGA CTACGCCGACCTGACCGGCGAGCCGATGTTCATGCGCAACAGCATCGACTTGTACCACAAGCAGGCCGCCGACACCGGTG CACGCATCGTGCACGCCTGCGGATTCGACTCCGTCCCATCTGATCTGAGCGTGTACGCCCTATACCACGCGGCACGAGAA GACGGCGCCGGCGAGCTGACCGACACCAACTGCGTGGTGCGTTCCTTCAAAGGCGGGTTCTCCGGCGGCACCATCGCATC GATGCTGGAGGTGTTGAGCACCGCTTCTAACGATCCCGATGCGCGCCGCCAGCTATCCGACCCCTACATGCTGAGCCCAG ACCGCGGCGCCGAACCCGAACTGGGCCCACAGCCTGACCTGCCGTCGCGTCGTGGCCGTCGGCTCGCGCCGGAACTGGCC GGTGTGTGGACCGCGGGATTCATCATGGCGCCCACCAACACCCGGATCGTGCGCCGCAGCAACGCGCTCCTGGACTGGGC CTACGGCCGGCGGTTCTGCTACAGCGAAACCATGAGCGTAGGGTCCACGGTGCTGGCGCCGGTGGTATCGGTTGTCGGCG GCGGTGTCGGCAACGCGATGTTCGGCTTGGCCAGCCGCTACATCCGCCTGCTGCCGCGGGGACTGGTAAAGCGTGTCGTC CCCAAACCCGGCACCGGCCCCAGTGCGGCGGCTCGCGAGCGCGGCTACTACCGCATCGAGACCTACACCACCACAACCAC CGGAGCCCGGTACCTGGCGCGCATGGCCCAAGATGGTGACCCCGGCTACAAGGCGACGTCGGTGTTGTTGGGGGAGTGTG GTCTGGCGCTGGCACTGGATCGCGACAAGCTGTCCGACATGCGTGGTGTGTTAACCCCCGCGGCCGCAATGGGTGACGCC CTGCTGGAGCGTTTGCCGGCCGCCGGTGTGTCGCTGCAGACCACGCGACTGGCTAGCTGA
Upstream 100 bases:
>100_bases GCCGCGGCTGACCACCGCGAAAAGACGCAAAAGCTCCCAAATCCGGTCGGATTTGGGAGCTTTTGCGTCTGCTCGCGCAC CCCGGAGTAGCGTCAAACCC
Downstream 100 bases:
>100_bases ATCCGGGCGGTTTCGGGCGCTTTCATGCCGGTGTGAAGCGGTTCCTAGAATTGATCGGTGACCGCCAGCCCTCACCCTGC CGCCGATATGCTGCCCAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MTATPREFDIVLYGATGFVGKLTAEYLARAGGDARIALAGRSTQRVLAVREALGESAQTWPILTADASLPSTLQAMAARA QVVVTTVGPYTRYGLPLVAACAAAGTDYADLTGEPMFMRNSIDLYHKQAADTGARIVHACGFDSVPSDLSVYALYHAARE DGAGELTDTNCVVRSFKGGFSGGTIASMLEVLSTASNDPDARRQLSDPYMLSPDRGAEPELGPQPDLPSRRGRRLAPELA GVWTAGFIMAPTNTRIVRRSNALLDWAYGRRFCYSETMSVGSTVLAPVVSVVGGGVGNAMFGLASRYIRLLPRGLVKRVV PKPGTGPSAAARERGYYRIETYTTTTTGARYLARMAQDGDPGYKATSVLLGECGLALALDRDKLSDMRGVLTPAAAMGDA LLERLPAAGVSLQTTRLAS
Sequences:
>Translated_419_residues MTATPREFDIVLYGATGFVGKLTAEYLARAGGDARIALAGRSTQRVLAVREALGESAQTWPILTADASLPSTLQAMAARA QVVVTTVGPYTRYGLPLVAACAAAGTDYADLTGEPMFMRNSIDLYHKQAADTGARIVHACGFDSVPSDLSVYALYHAARE DGAGELTDTNCVVRSFKGGFSGGTIASMLEVLSTASNDPDARRQLSDPYMLSPDRGAEPELGPQPDLPSRRGRRLAPELA GVWTAGFIMAPTNTRIVRRSNALLDWAYGRRFCYSETMSVGSTVLAPVVSVVGGGVGNAMFGLASRYIRLLPRGLVKRVV PKPGTGPSAAARERGYYRIETYTTTTTGARYLARMAQDGDPGYKATSVLLGECGLALALDRDKLSDMRGVLTPAAAMGDA LLERLPAAGVSLQTTRLAS >Mature_418_residues TATPREFDIVLYGATGFVGKLTAEYLARAGGDARIALAGRSTQRVLAVREALGESAQTWPILTADASLPSTLQAMAARAQ VVVTTVGPYTRYGLPLVAACAAAGTDYADLTGEPMFMRNSIDLYHKQAADTGARIVHACGFDSVPSDLSVYALYHAARED GAGELTDTNCVVRSFKGGFSGGTIASMLEVLSTASNDPDARRQLSDPYMLSPDRGAEPELGPQPDLPSRRGRRLAPELAG VWTAGFIMAPTNTRIVRRSNALLDWAYGRRFCYSETMSVGSTVLAPVVSVVGGGVGNAMFGLASRYIRLLPRGLVKRVVP KPGTGPSAAARERGYYRIETYTTTTTGARYLARMAQDGDPGYKATSVLLGECGLALALDRDKLSDMRGVLTPAAAMGDAL LERLPAAGVSLQTTRLAS
Specific function: Unknown
COG id: COG3268
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the saccharopine dehydrogenase family. Enoyl reductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI55770836, Length=456, Percent_Identity=27.4122807017544, Blast_Score=116, Evalue=4e-26, Organism=Caenorhabditis elegans, GI32567112, Length=201, Percent_Identity=32.8358208955224, Blast_Score=112, Evalue=5e-25, Organism=Caenorhabditis elegans, GI17560066, Length=201, Percent_Identity=32.8358208955224, Blast_Score=111, Evalue=7e-25, Organism=Caenorhabditis elegans, GI71991033, Length=154, Percent_Identity=34.4155844155844, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI24646278, Length=438, Percent_Identity=27.1689497716895, Blast_Score=121, Evalue=8e-28, Organism=Drosophila melanogaster, GI24644140, Length=432, Percent_Identity=27.3148148148148, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI24644142, Length=432, Percent_Identity=27.3148148148148, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI21356081, Length=432, Percent_Identity=27.3148148148148, Blast_Score=112, Evalue=5e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR005097 [H]
Pfam domain/function: PF03435 Saccharop_dh [H]
EC number: NA
Molecular weight: Translated: 44326; Mature: 44195
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATPREFDIVLYGATGFVGKLTAEYLARAGGDARIALAGRSTQRVLAVREALGESAQTW CCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCC PILTADASLPSTLQAMAARAQVVVTTVGPYTRYGLPLVAACAAAGTDYADLTGEPMFMRN EEEEECCCCHHHHHHHHHCCEEEEEECCCHHHHCHHHHHHHHHCCCCHHHCCCCCEEEEC SIDLYHKQAADTGARIVHACGFDSVPSDLSVYALYHAAREDGAGELTDTNCVVRSFKGGF CHHHHHHHHHCCHHHEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCC SGGTIASMLEVLSTASNDPDARRQLSDPYMLSPDRGAEPELGPQPDLPSRRGRRLAPELA CCCHHHHHHHHHHHCCCCCHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHH GVWTAGFIMAPTNTRIVRRSNALLDWAYGRRFCYSETMSVGSTVLAPVVSVVGGGVGNAM HHHHCCEEECCCCCEEEECCCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH FGLASRYIRLLPRGLVKRVVPKPGTGPSAAARERGYYRIETYTTTTTGARYLARMAQDGD HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCEEEEEEEECCHHHHHHHHHHCCCC PGYKATSVLLGECGLALALDRDKLSDMRGVLTPAAAMGDALLERLPAAGVSLQTTRLAS CCHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCC >Mature Secondary Structure TATPREFDIVLYGATGFVGKLTAEYLARAGGDARIALAGRSTQRVLAVREALGESAQTW CCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCC PILTADASLPSTLQAMAARAQVVVTTVGPYTRYGLPLVAACAAAGTDYADLTGEPMFMRN EEEEECCCCHHHHHHHHHCCEEEEEECCCHHHHCHHHHHHHHHCCCCHHHCCCCCEEEEC SIDLYHKQAADTGARIVHACGFDSVPSDLSVYALYHAAREDGAGELTDTNCVVRSFKGGF CHHHHHHHHHCCHHHEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCC SGGTIASMLEVLSTASNDPDARRQLSDPYMLSPDRGAEPELGPQPDLPSRRGRRLAPELA CCCHHHHHHHHHHHCCCCCHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHH GVWTAGFIMAPTNTRIVRRSNALLDWAYGRRFCYSETMSVGSTVLAPVVSVVGGGVGNAM HHHHCCEEECCCCCEEEECCCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH FGLASRYIRLLPRGLVKRVVPKPGTGPSAAARERGYYRIETYTTTTTGARYLARMAQDGD HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCEEEEEEEECCHHHHHHHHHHCCCC PGYKATSVLLGECGLALALDRDKLSDMRGVLTPAAAMGDALLERLPAAGVSLQTTRLAS CCHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230 [H]