| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is obgE
Identifier: 121638323
GI number: 121638323
Start: 2703417
End: 2704856
Strand: Reverse
Name: obgE
Synonym: BCG_2460c
Alternate gene names: 121638323
Gene position: 2704856-2703417 (Counterclockwise)
Preceding gene: 121638324
Following gene: 121638322
Centisome position: 61.83
GC content: 67.64
Gene sequence:
>1440_bases GTGCCTCGGTTTGTCGATCGGGTCGTCATCCACACCAGAGCGGGTTCGGGCGGTAACGGCTGCGCTTCGGTCCATCGCGA GAAATTCAAGCCGCTGGGCGGCCCCGATGGCGGAAATGGCGGCCGGGGCGGCAGCATCGTCTTCGTCGTCGATCCGCAAG TGCACACCCTGCTCGACTTCCATTTCCGCCCGCATCTCACCGCGGCTTCGGGCAAGCACGGGATGGGCAATAACCGCGAC GGGGCCGCCGGCGCGGATTTGGAAGTGAAAGTTCCCGAAGGCACCGTGGTATTGGACGAGAACGGCCGGCTACTGGCCGA CCTGGTCGGCGCGGGCACCCGCTTTGAAGCCGCCGCCGGAGGCCGTGGCGGTTTGGGCAACGCCGCGCTGGCTTCCCGCG TGCGTAAGGCCCCCGGTTTCGCACTCCTCGGCGAAAAGGGACAGTCCCGAGACCTCACCTTGGAACTCAAGACCGTCGCC GACGTCGGCCTGGTCGGGTTTCCGTCGGCCGGAAAATCCTCGCTGGTGTCGGCGATTTCGGCGGCCAAGCCGAAGATCGC CGACTACCCGTTCACCACCCTGGTGCCCAACCTCGGTGTGGTCTCGGCTGGCGAGCACGCGTTCACCGTCGCCGACGTGC CGGGGTTGATCCCGGGCGCATCCCGGGGCCGTGGTCTGGGGCTGGACTTTCTGCGGCACATCGAGCGCTGCGCTGTACTG GTGCATGTGGTGGATTGCGCTACCGCCGAGCCGGGCCGCGACCCCATCTCGGACATCGACGCGCTGGAAACGGAACTCGC GTGCTACACGCCCACGCTGCAAGGGGACGCGGCTCTGGGCGATCTCGCCGCACGGCCGCGTGCGGTGGTCCTCAACAAAA TCGATGTGCCGGAGGCCCGCGAGCTCGCGGAGTTCGTCCGTGACGACATCGCCCAGCGCGGCTGGCCGGTGTTCTGCGTG TCGACCGCAACCCGGGAAAACCTGCAGCCGTTGATCTTTGGGCTGTCGCAGATGATCTCGGACTACAACGCTGCGCGGCC GGTGGCGGTGCCACGGCGGCCGGTGATTCGTCCGATTCCGGTGGACGACAGCGGTTTTACCGTCGAACCCGACGGGCATG GTGGCTTTGTCGTCAGCGGTGCCCGGCCCGAGCGTTGGATTGACCAGACCAACTTCGACAACGACGAGGCCGTCGGCTAT CTCGCCGACCGGCTGGCGCGCCTGGGTGTCGAGGAGGAATTGCTGAGGCTGGGTGCGCGGTCAGGATGCGCGGTGACCAT CGGCGAGATGACGTTCGATTGGGAGCCGCAAACGCCTGCGGGTGAGCCGGTCGCGATGTCCGGCCGGGGCACCGATCCGC GGCTGGACAGCAACAAGCGGGTGGGCGCGGCCGAGCGAAAGGCCGCTCGGAGTCGGCGTCGCGAACACGGGGATGGCTGA
Upstream 100 bases:
>100_bases TCGACCACTGCCTGAGCGTCGCGCGTGTGCGCCCACTGCGAAGATTCACGAGGGGCAAAACCCGCAGTAGCTGCACACTC CGCAGATGAAGGGGAGCTCG
Downstream 100 bases:
>100_bases TGAGAAGTCCGCATCGGGACGCAATCCGGACCGCGCGCGGCCTTGTCGTGAAGGTCGGGACCACGGCGCTTACCACACCG TCCGGGATGTTCGATGCCGG
Product: GTPase ObgE
Products: NA
Alternate protein names: GTP-binding protein obg
Number of amino acids: Translated: 479; Mature: 478
Protein sequence:
>479_residues MPRFVDRVVIHTRAGSGGNGCASVHREKFKPLGGPDGGNGGRGGSIVFVVDPQVHTLLDFHFRPHLTAASGKHGMGNNRD GAAGADLEVKVPEGTVVLDENGRLLADLVGAGTRFEAAAGGRGGLGNAALASRVRKAPGFALLGEKGQSRDLTLELKTVA DVGLVGFPSAGKSSLVSAISAAKPKIADYPFTTLVPNLGVVSAGEHAFTVADVPGLIPGASRGRGLGLDFLRHIERCAVL VHVVDCATAEPGRDPISDIDALETELACYTPTLQGDAALGDLAARPRAVVLNKIDVPEARELAEFVRDDIAQRGWPVFCV STATRENLQPLIFGLSQMISDYNAARPVAVPRRPVIRPIPVDDSGFTVEPDGHGGFVVSGARPERWIDQTNFDNDEAVGY LADRLARLGVEEELLRLGARSGCAVTIGEMTFDWEPQTPAGEPVAMSGRGTDPRLDSNKRVGAAERKAARSRRREHGDG
Sequences:
>Translated_479_residues MPRFVDRVVIHTRAGSGGNGCASVHREKFKPLGGPDGGNGGRGGSIVFVVDPQVHTLLDFHFRPHLTAASGKHGMGNNRD GAAGADLEVKVPEGTVVLDENGRLLADLVGAGTRFEAAAGGRGGLGNAALASRVRKAPGFALLGEKGQSRDLTLELKTVA DVGLVGFPSAGKSSLVSAISAAKPKIADYPFTTLVPNLGVVSAGEHAFTVADVPGLIPGASRGRGLGLDFLRHIERCAVL VHVVDCATAEPGRDPISDIDALETELACYTPTLQGDAALGDLAARPRAVVLNKIDVPEARELAEFVRDDIAQRGWPVFCV STATRENLQPLIFGLSQMISDYNAARPVAVPRRPVIRPIPVDDSGFTVEPDGHGGFVVSGARPERWIDQTNFDNDEAVGY LADRLARLGVEEELLRLGARSGCAVTIGEMTFDWEPQTPAGEPVAMSGRGTDPRLDSNKRVGAAERKAARSRRREHGDG >Mature_478_residues PRFVDRVVIHTRAGSGGNGCASVHREKFKPLGGPDGGNGGRGGSIVFVVDPQVHTLLDFHFRPHLTAASGKHGMGNNRDG AAGADLEVKVPEGTVVLDENGRLLADLVGAGTRFEAAAGGRGGLGNAALASRVRKAPGFALLGEKGQSRDLTLELKTVAD VGLVGFPSAGKSSLVSAISAAKPKIADYPFTTLVPNLGVVSAGEHAFTVADVPGLIPGASRGRGLGLDFLRHIERCAVLV HVVDCATAEPGRDPISDIDALETELACYTPTLQGDAALGDLAARPRAVVLNKIDVPEARELAEFVRDDIAQRGWPVFCVS TATRENLQPLIFGLSQMISDYNAARPVAVPRRPVIRPIPVDDSGFTVEPDGHGGFVVSGARPERWIDQTNFDNDEAVGYL ADRLARLGVEEELLRLGARSGCAVTIGEMTFDWEPQTPAGEPVAMSGRGTDPRLDSNKRVGAAERKAARSRRREHGDG
Specific function: An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. It may play a role in control of the cell cycle, stress response, ribosome biogenesis and in t
COG id: COG0536
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain
Homologues:
Organism=Homo sapiens, GI24308117, Length=343, Percent_Identity=44.3148688046647, Blast_Score=201, Evalue=2e-51, Organism=Homo sapiens, GI111955139, Length=309, Percent_Identity=37.8640776699029, Blast_Score=159, Evalue=4e-39, Organism=Homo sapiens, GI111955063, Length=193, Percent_Identity=37.3056994818653, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI58761500, Length=132, Percent_Identity=30.3030303030303, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI1789574, Length=341, Percent_Identity=42.5219941348974, Blast_Score=227, Evalue=2e-60, Organism=Escherichia coli, GI1787454, Length=162, Percent_Identity=32.7160493827161, Blast_Score=71, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17508313, Length=336, Percent_Identity=38.9880952380952, Blast_Score=151, Evalue=7e-37, Organism=Caenorhabditis elegans, GI17552324, Length=318, Percent_Identity=31.7610062893082, Blast_Score=129, Evalue=2e-30, Organism=Caenorhabditis elegans, GI17509631, Length=134, Percent_Identity=29.8507462686567, Blast_Score=70, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6321962, Length=205, Percent_Identity=35.609756097561, Blast_Score=127, Evalue=4e-30, Organism=Saccharomyces cerevisiae, GI6321649, Length=141, Percent_Identity=31.2056737588652, Blast_Score=69, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6319281, Length=108, Percent_Identity=37.037037037037, Blast_Score=68, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6321612, Length=107, Percent_Identity=37.3831775700935, Blast_Score=66, Evalue=9e-12, Organism=Drosophila melanogaster, GI20129375, Length=330, Percent_Identity=38.1818181818182, Blast_Score=165, Evalue=7e-41, Organism=Drosophila melanogaster, GI24585318, Length=319, Percent_Identity=35.1097178683386, Blast_Score=149, Evalue=5e-36, Organism=Drosophila melanogaster, GI24640873, Length=128, Percent_Identity=29.6875, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI24640877, Length=128, Percent_Identity=29.6875, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI24640875, Length=128, Percent_Identity=29.6875, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): OBG_MYCBO (Q7TYK5)
Other databases:
- EMBL: BX248342 - RefSeq: NP_856114.1 - HSSP: P20964 - ProteinModelPortal: Q7TYK5 - SMR: Q7TYK5 - EnsemblBacteria: EBMYCT00000015539 - GeneID: 1094248 - GenomeReviews: BX248333_GR - KEGG: mbo:Mb2467c - GeneTree: EBGT00050000015858 - HOGENOM: HBG716038 - OMA: HFTTLVP - ProtClustDB: PRK12296 - BioCyc: MBOV233413:MB2467C-MONOMER - GO: GO:0005737 - HAMAP: MF_01454 - InterPro: IPR014100 - InterPro: IPR015349 - InterPro: IPR006074 - InterPro: IPR006073 - InterPro: IPR006169 - InterPro: IPR002917 - Gene3D: G3DSA:2.70.210.12 - PANTHER: PTHR11702:SF3 - PIRSF: PIRSF002401 - PRINTS: PR00326 - TIGRFAMs: TIGR02729 - TIGRFAMs: TIGR03595
Pfam domain/function: PF09269 DUF1967; PF01018 GTP1_OBG; PF01926 MMR_HSR1; SSF102741 GTP-bd_prot_GTP1/OBG_C; SSF82051 GTP1_OBG_sub
EC number: NA
Molecular weight: Translated: 50462; Mature: 50330
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: PS00905 GTP1_OBG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRFVDRVVIHTRAGSGGNGCASVHREKFKPLGGPDGGNGGRGGSIVFVVDPQVHTLLDF CCCHHCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEHHHH HFRPHLTAASGKHGMGNNRDGAAGADLEVKVPEGTVVLDENGRLLADLVGAGTRFEAAAG CCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCEEHHHHCCCCEEEECCC GRGGLGNAALASRVRKAPGFALLGEKGQSRDLTLELKTVADVGLVGFPSAGKSSLVSAIS CCCCCCHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEEHHCCCEEECCCCCHHHHHHHHH AAKPKIADYPFTTLVPNLGVVSAGEHAFTVADVPGLIPGASRGRGLGLDFLRHIERCAVL HCCCCCCCCCHHHHCCCCCEEECCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH VHVVDCATAEPGRDPISDIDALETELACYTPTLQGDAALGDLAARPRAVVLNKIDVPEAR HHHHHHCCCCCCCCCHHHHHHHHHHHHEECCCCCCCCHHHHHHCCCCEEEEECCCCCCHH ELAEFVRDDIAQRGWPVFCVSTATRENLQPLIFGLSQMISDYNAARPVAVPRRPVIRPIP HHHHHHHHHHHHCCCCEEEEECCCHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECC VDDSGFTVEPDGHGGFVVSGARPERWIDQTNFDNDEAVGYLADRLARLGVEEELLRLGAR CCCCCCEECCCCCCCEEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCC SGCAVTIGEMTFDWEPQTPAGEPVAMSGRGTDPRLDSNKRVGAAERKAARSRRREHGDG CCCEEEECCEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure PRFVDRVVIHTRAGSGGNGCASVHREKFKPLGGPDGGNGGRGGSIVFVVDPQVHTLLDF CCHHCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEHHHH HFRPHLTAASGKHGMGNNRDGAAGADLEVKVPEGTVVLDENGRLLADLVGAGTRFEAAAG CCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCEEHHHHCCCCEEEECCC GRGGLGNAALASRVRKAPGFALLGEKGQSRDLTLELKTVADVGLVGFPSAGKSSLVSAIS CCCCCCHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEEHHCCCEEECCCCCHHHHHHHHH AAKPKIADYPFTTLVPNLGVVSAGEHAFTVADVPGLIPGASRGRGLGLDFLRHIERCAVL HCCCCCCCCCHHHHCCCCCEEECCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH VHVVDCATAEPGRDPISDIDALETELACYTPTLQGDAALGDLAARPRAVVLNKIDVPEAR HHHHHHCCCCCCCCCHHHHHHHHHHHHEECCCCCCCCHHHHHHCCCCEEEEECCCCCCHH ELAEFVRDDIAQRGWPVFCVSTATRENLQPLIFGLSQMISDYNAARPVAVPRRPVIRPIP HHHHHHHHHHHHCCCCEEEEECCCHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECC VDDSGFTVEPDGHGGFVVSGARPERWIDQTNFDNDEAVGYLADRLARLGVEEELLRLGAR CCCCCCEECCCCCCCEEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCC SGCAVTIGEMTFDWEPQTPAGEPVAMSGRGTDPRLDSNKRVGAAERKAARSRRREHGDG CCCEEEECCEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972