| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121638298
Identifier: 121638298
GI number: 121638298
Start: 2680661
End: 2681503
Strand: Reverse
Name: 121638298
Synonym: BCG_2433c
Alternate gene names: NA
Gene position: 2681503-2680661 (Counterclockwise)
Preceding gene: 121638299
Following gene: 121638297
Centisome position: 61.3
GC content: 69.16
Gene sequence:
>843_bases GTGACCGTTGTGGTGGTGACCGATACGTCGTGTCGACTGCCGGCCGACCTGCGCGAACAGTGGTCGATCCGCCAGGTCCC GCTGCATATCTTGCTTGACGGCCTCGACCTGCGCGACGGTGTGGACGAAATCCCCGATGACATCCACAAGCGCCACGCCA CCACCGCTGGGGCGACCCCGGTTGAGCTGTCCGCCGCCTACCAACGGGCGTTGGCGGACAGTGGCGGCGACGGGGTAGTG GCGGTGCACATTTCGTCGGCGCTGTCGGGTACCTTTCGAGCCGCCGAGCTGACCGCGGCGGAACTAGGTCCCGCCGTTAG GGTGATCGACTCGAGGTCGGCCGCGATGGGCGTCGGTTTCGCGGCACTGGCGGCCGGGCGGGCAGCCGCCGCAGGCGATG AGCTGGATACGGTCGCGCGCGCAGCGGCTGCGGCGGTAAGCCGGATTCACGCGTTCGTCGCTGTAGCGCGGTTGGACAAT CTGCGCCGCAGCGGGCGCATCAGTGGGGCCAAGGCATGGTTGGGCACCGCGCTGGCGCTCAAGCCGCTGCTGTCAGTCGA CGACGGAAAACTTGTTCTGGTCCAACGGGTTCGCACTGTGAGCAACGCGACGGCGGTGATGATCGACCGGGTTTGCCAGC TTGTCGGCGACCGCCCCGCCGCTCTCGCGGTGCATCACGTCGCCGACCCGGCAGCTGCGAACGACGTGGCGGCGGCGCTG GCGGAGCGGCTGCCGGCGTGTGAGCCGGCCATGGTGACCGCCATGGGACCGGTACTTGCTCTGCACGTCGGTGCCGGAGC CGTCGGGGTATGCGTCGACGTGGGAGCGTCGCCGCCAGCGTAA
Upstream 100 bases:
>100_bases ACGAGAAATCGCGCGGCTGAGACATGCCCCGCGCCGGCGACGATGCAGAGCGAAGCGATGAGGTGGGGGCACCTCCCGCT TGCGGGGGAGAGCGGCGCCG
Downstream 100 bases:
>100_bases CGTCACGGCGAAATTCGTCGCTGATTCTCGCAGTGGCGTCACGCTGGCGGGGCTACCCGCATCGCGTGATCCTTTGCCAG ACACTGTCGTCGTAATATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MTVVVVTDTSCRLPADLREQWSIRQVPLHILLDGLDLRDGVDEIPDDIHKRHATTAGATPVELSAAYQRALADSGGDGVV AVHISSALSGTFRAAELTAAELGPAVRVIDSRSAAMGVGFAALAAGRAAAAGDELDTVARAAAAAVSRIHAFVAVARLDN LRRSGRISGAKAWLGTALALKPLLSVDDGKLVLVQRVRTVSNATAVMIDRVCQLVGDRPAALAVHHVADPAAANDVAAAL AERLPACEPAMVTAMGPVLALHVGAGAVGVCVDVGASPPA
Sequences:
>Translated_280_residues MTVVVVTDTSCRLPADLREQWSIRQVPLHILLDGLDLRDGVDEIPDDIHKRHATTAGATPVELSAAYQRALADSGGDGVV AVHISSALSGTFRAAELTAAELGPAVRVIDSRSAAMGVGFAALAAGRAAAAGDELDTVARAAAAAVSRIHAFVAVARLDN LRRSGRISGAKAWLGTALALKPLLSVDDGKLVLVQRVRTVSNATAVMIDRVCQLVGDRPAALAVHHVADPAAANDVAAAL AERLPACEPAMVTAMGPVLALHVGAGAVGVCVDVGASPPA >Mature_279_residues TVVVVTDTSCRLPADLREQWSIRQVPLHILLDGLDLRDGVDEIPDDIHKRHATTAGATPVELSAAYQRALADSGGDGVVA VHISSALSGTFRAAELTAAELGPAVRVIDSRSAAMGVGFAALAAGRAAAAGDELDTVARAAAAAVSRIHAFVAVARLDNL RRSGRISGAKAWLGTALALKPLLSVDDGKLVLVQRVRTVSNATAVMIDRVCQLVGDRPAALAVHHVADPAAANDVAAALA ERLPACEPAMVTAMGPVLALHVGAGAVGVCVDVGASPPA
Specific function: Unknown
COG id: COG1307
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DegV domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2417_MYCTU (P67368)
Other databases:
- EMBL: BX842579 - EMBL: AE000516 - PIR: D70685 - RefSeq: NP_216933.1 - RefSeq: NP_336973.1 - ProteinModelPortal: P67368 - SMR: P67368 - EnsemblBacteria: EBMYCT00000001460 - EnsemblBacteria: EBMYCT00000070438 - GeneID: 885692 - GeneID: 925845 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2490 - KEGG: mtu:Rv2417c - TIGR: MT2490 - TubercuList: Rv2417c - GeneTree: EBGT00050000017461 - HOGENOM: HBG729520 - OMA: HILAEDE - ProtClustDB: CLSK791837 - InterPro: IPR003797 - TIGRFAMs: TIGR00762
Pfam domain/function: PF02645 DegV
EC number: NA
Molecular weight: Translated: 28488; Mature: 28357
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS51482 DEGV
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVVVVTDTSCRLPADLREQWSIRQVPLHILLDGLDLRDGVDEIPDDIHKRHATTAGATP CEEEEEECCCCCCCHHHHHCCCHHHCCHHHEEECCCCCCCHHHHHHHHHHHHCCCCCCCC VELSAAYQRALADSGGDGVVAVHISSALSGTFRAAELTAAELGPAVRVIDSRSAAMGVGF HHHHHHHHHHHHCCCCCCEEEEEECCHHCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHH AALAAGRAAAAGDELDTVARAAAAAVSRIHAFVAVARLDNLRRSGRISGAKAWLGTALAL HHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH KPLLSVDDGKLVLVQRVRTVSNATAVMIDRVCQLVGDRPAALAVHHVADPAAANDVAAAL HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEHHHCCCCHHHHHHHHH AERLPACEPAMVTAMGPVLALHVGAGAVGVCVDVGASPPA HHHCCCCCCHHHHHHHHHHHEEECCCCEEEEEECCCCCCC >Mature Secondary Structure TVVVVTDTSCRLPADLREQWSIRQVPLHILLDGLDLRDGVDEIPDDIHKRHATTAGATP EEEEEECCCCCCCHHHHHCCCHHHCCHHHEEECCCCCCCHHHHHHHHHHHHCCCCCCCC VELSAAYQRALADSGGDGVVAVHISSALSGTFRAAELTAAELGPAVRVIDSRSAAMGVGF HHHHHHHHHHHHCCCCCCEEEEEECCHHCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHH AALAAGRAAAAGDELDTVARAAAAAVSRIHAFVAVARLDNLRRSGRISGAKAWLGTALAL HHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH KPLLSVDDGKLVLVQRVRTVSNATAVMIDRVCQLVGDRPAALAVHHVADPAAANDVAAAL HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEHHHCCCCHHHHHHHHH AERLPACEPAMVTAMGPVLALHVGAGAVGVCVDVGASPPA HHHCCCCCCHHHHHHHHHHHEEECCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036