| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121638294
Identifier: 121638294
GI number: 121638294
Start: 2675540
End: 2676490
Strand: Reverse
Name: 121638294
Synonym: BCG_2429c
Alternate gene names: NA
Gene position: 2676490-2675540 (Counterclockwise)
Preceding gene: 121638295
Following gene: 121638292
Centisome position: 61.18
GC content: 69.51
Gene sequence:
>951_bases TTGCACCTGGTCCTGGGAGACGAAGAACTGCTGGTCGAAAGGGCGGTGGCCGACGTGTTGCGCTCGGCTCGGCAGCGGGC AGGTACAGCCGACGTCCCGGTGAGCCGAATGCGCGCGGGTGACGTCGGTGCCTATGAGCTCGCCGAACTGCTGAGCCCGT CACTGTTCGCCGAGGAGCGGATCGTTGTGCTGGGGGCCGCTGCGGAGGCGGGCAAGGACGCTGCCGCGGTAATCGAGTCG GCCGCCGCCGATCTTCCGGCCGGCACCGTGCTGGTAGTGGTCCACTCGGGTGGCGGGCGCGCCAAATCGCTGGCCAACCA GCTGCGGTCGATGGGTGCGCAGGTTCATCCGTGCGCGCGGATCACCAAGGTCAGTGAGCGCGCCGACTTCATCCGTAGCG AGTTCGCGTCGCTGCGGGTCAAGGTCGACGACGAGACCGTGACCGCCCTGCTGGACGCCGTCGGCTCCGACGTGCGCGAA CTCGCCTCGGCCTGTTCACAGCTGGTCGCCGATACCGGAGGAGCCGTCGACGCCGCCGCTGTACGGCGCTATCACAGCGG CAAAGCCGAGGTGAGGGGCTTCGACATCGCCGACAAGGCGGTAGCCGGCGACGTGGCGGGAGCTGCCGAAGCGTTGCGGT GGGCGATGATGCGCGGTGAGCCGCTAGTGGTGTTGGCCGATGCGCTCGCCGAAGCCGTGCACACCATCGGCCGGGTCGGG CCGCAGTCCGGCGACCCGTACCGCCTGGCCGCACAACTGGGGATGCCGCCCTGGCGGGTGCAGAAAGCCCAGAAGCAGGC TCGGCGGTGGTCGCGTGACACGGTGGCGACCGCGATGAGGTTGGTGGCCGAACTCAATGCTAACGTCAAGGGCGCCGTCG CGGATGCGGACTACGCGCTGGAATCCGCGGTCCGGCAGGTCGCCGAGTTGGTGGCCGACCGCGGCCGATGA
Upstream 100 bases:
>100_bases CAAAACGATGGCGGTGGCCGTCATATGTCTGCTTGCCTGGTCGCTGTCCGGGCTGGTCGGCCCTTCGTGACACCATCGTG GGGTGAGCGAGGCTAAGCCG
Downstream 100 bases:
>100_bases GTCGGCAGGTGGCTGTCAGAGCTTGTTGAGCGCCTGGGCCAGTGCCGACTTCTTGTTGGCGGCCTGGTTTTTGTGGATCA CGCCCTTGCTGGCCGCCTTG
Product: hypothetical protein
Products: diphosphate; DNAn+1
Alternate protein names: DNA Polymerase III Subunit Delta; DNA Polymerase III Delta; DNA Polymerase III Delta Subunit HolA; DNA Polymerase III Subunit Delta-Like Protein; LOW QUALITY PROTEIN DNA Polymerase III Delta Subunit
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MHLVLGDEELLVERAVADVLRSARQRAGTADVPVSRMRAGDVGAYELAELLSPSLFAEERIVVLGAAAEAGKDAAAVIES AAADLPAGTVLVVVHSGGGRAKSLANQLRSMGAQVHPCARITKVSERADFIRSEFASLRVKVDDETVTALLDAVGSDVRE LASACSQLVADTGGAVDAAAVRRYHSGKAEVRGFDIADKAVAGDVAGAAEALRWAMMRGEPLVVLADALAEAVHTIGRVG PQSGDPYRLAAQLGMPPWRVQKAQKQARRWSRDTVATAMRLVAELNANVKGAVADADYALESAVRQVAELVADRGR
Sequences:
>Translated_316_residues MHLVLGDEELLVERAVADVLRSARQRAGTADVPVSRMRAGDVGAYELAELLSPSLFAEERIVVLGAAAEAGKDAAAVIES AAADLPAGTVLVVVHSGGGRAKSLANQLRSMGAQVHPCARITKVSERADFIRSEFASLRVKVDDETVTALLDAVGSDVRE LASACSQLVADTGGAVDAAAVRRYHSGKAEVRGFDIADKAVAGDVAGAAEALRWAMMRGEPLVVLADALAEAVHTIGRVG PQSGDPYRLAAQLGMPPWRVQKAQKQARRWSRDTVATAMRLVAELNANVKGAVADADYALESAVRQVAELVADRGR >Mature_316_residues MHLVLGDEELLVERAVADVLRSARQRAGTADVPVSRMRAGDVGAYELAELLSPSLFAEERIVVLGAAAEAGKDAAAVIES AAADLPAGTVLVVVHSGGGRAKSLANQLRSMGAQVHPCARITKVSERADFIRSEFASLRVKVDDETVTALLDAVGSDVRE LASACSQLVADTGGAVDAAAVRRYHSGKAEVRGFDIADKAVAGDVAGAAEALRWAMMRGEPLVVLADALAEAVHTIGRVG PQSGDPYRLAAQLGMPPWRVQKAQKQARRWSRDTVATAMRLVAELNANVKGAVADADYALESAVRQVAELVADRGR
Specific function: Unknown
COG id: COG1466
COG function: function code L; DNA polymerase III, delta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.7.7
Molecular weight: Translated: 33132; Mature: 33132
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLVLGDEELLVERAVADVLRSARQRAGTADVPVSRMRAGDVGAYELAELLSPSLFAEER CEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHCCHHHCCCC IVVLGAAAEAGKDAAAVIESAAADLPAGTVLVVVHSGGGRAKSLANQLRSMGAQVHPCAR EEEEECCHHCCCHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCHHH ITKVSERADFIRSEFASLRVKVDDETVTALLDAVGSDVRELASACSQLVADTGGAVDAAA HHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHH VRRYHSGKAEVRGFDIADKAVAGDVAGAAEALRWAMMRGEPLVVLADALAEAVHTIGRVG HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC PQSGDPYRLAAQLGMPPWRVQKAQKQARRWSRDTVATAMRLVAELNANVKGAVADADYAL CCCCCCEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHH ESAVRQVAELVADRGR HHHHHHHHHHHHCCCC >Mature Secondary Structure MHLVLGDEELLVERAVADVLRSARQRAGTADVPVSRMRAGDVGAYELAELLSPSLFAEER CEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHCCHHHCCCC IVVLGAAAEAGKDAAAVIESAAADLPAGTVLVVVHSGGGRAKSLANQLRSMGAQVHPCAR EEEEECCHHCCCHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCHHH ITKVSERADFIRSEFASLRVKVDDETVTALLDAVGSDVRELASACSQLVADTGGAVDAAA HHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHH VRRYHSGKAEVRGFDIADKAVAGDVAGAAEALRWAMMRGEPLVVLADALAEAVHTIGRVG HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC PQSGDPYRLAAQLGMPPWRVQKAQKQARRWSRDTVATAMRLVAELNANVKGAVADADYAL CCCCCCEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHH ESAVRQVAELVADRGR HHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: deoxynucleoside triphosphate; DNAn
Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA