| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121638275
Identifier: 121638275
GI number: 121638275
Start: 2655602
End: 2657152
Strand: Direct
Name: 121638275
Synonym: BCG_2410
Alternate gene names: NA
Gene position: 2655602-2657152 (Clockwise)
Preceding gene: 121638274
Following gene: 121638276
Centisome position: 60.71
GC content: 64.67
Gene sequence:
>1551_bases ATGGAGCACAACCGTAGGGGAATTGGGGTAATCGCCCTGGGCGCGGCAGCGGCGGCGGGATATGCACTGCTGGCATCCCT GCGGGTGATCAACAACTCACTGTCGGCCACCTTCCGAGTAGGTTCCGGTGCGACGATGATCGGTGCCAGCTTGTCGCTGG CGTTGATCGGCGTCGGTCATCTTGTTGGCGTCACCGTCGGTGTCGCAATGATCGTCGGATTGGCTATCGCCTTTGGGGTA ATGCTGCCAATACGGACAGCCGGCCAACTGCCGCCGGACGGGGACTACGCCGTCGCCGTCGCCAGAATTTTCTCGACGGA CGTGCGGTTCATCGGGGCGGGCGCCATTGCGGTGGCGGCCGCCTGGACGTTCTTGAAGATCCTGGGGCCGATTCTGCGTG GCATCGCCGACGCCGCGGTCTCAGCTCGAACCCGACGCCGAGGGCAAGCGGTTGGCCAGACCGAGCGCGACATCCCGATC CACATCGTGGCCATGGTGGTTCTTCTCTCGCTGATCCCAATCGGATGGCTGCTCGCGGACTTTACCGACGGGACACCGCT CGATGACCGCAGGCCCGGCGCCATCGCCGCCGGGGTACTGCTCGTCTTGGTCATCGGGTTGATGGTCGCTGCGGTCTGCG GTTACATGGCCGGGTTGATCGGCTCGTCGAACAGCCCGATCTCGGGCGTGGGCATTCTGGTGGTGGTGCTGGCCGGTCTG CTGATCAAGACTGCGTATGGTCCGGCCACCGGCTCGCAGATTCCGGCCCTGGTGGCCTACACCGTGTTTACCGCTGCATT GGTCTTCGGCGTGGCGACTATTTCCAACGACAATCTGCAGGACCTCAAAACCGGCCAACTCGTCGGCGCTACCCCATGGA AGCAGCAGGTTGCACTGATCATCGGCGTGCTCGTCGGGTCGGTGGTGATGGCGCCGATCCTGCAGCTGATGCAGGCTGGA TTCGGGTTCCAGGGGGCGCCGGGCGCAACGGCCAACGCATTGGCCGCCCCGCAAGCCGCGCTCATGTCCGCGCTGGCCAA GGGAGTATTTGGTGGCTCGCTGAACTGGTCGCTGGTCGGTGTAGGGGCCTTGACCGGCGTGATAGCGGTCGCGCTCGACG AGACACTGGCCAAGACGACAACCAACCTTCGGCTGCCGCCACTAGCGGTGGGTATGGGTATGTACCTGCCGGCCGCACTG ACGCTGATGATCCCGATCGGCGCATTCCTCGGGCGGATCTATGACTCCTGGGCGCGGTGGTCTGGGGATGACGACGAGCG CAAGAAACGGTTGGGCGTCATGCTCGCGACGGGCCTGATTGTGGGCGAAAGCCTATACGGGGTGCTCTTTGCCGTCATCG TCGCGACAACTGGCAAAGAGGAGCCGCTGGCCATGGTCGGCGACGGATTCAGGTTTGCCTCCCAGCCGCTGGGAGCCATC GTCTTTGCCGGCCTCCTCGCTTGGCTCTACCAGCGCACCCGGGTCACAGCGTCGTACCGGCTGGCAGCGCCGGCCGGCAG CTCCAAGCCACTGCCCGATTTGCCTGGGTAA
Upstream 100 bases:
>100_bases AATTCCGTTGCGCCGCGCACTCGTCACCGGATCAGACCTGCCGTACCCAGAAGGCGTTGCCGGAGCCGAGGTTCTCAAGA TCGGTGACTCCGCACGGGAG
Downstream 100 bases:
>100_bases CCGCATTGCGCCCGAGGGGTCCGGCTTTTCACAGCAACTTCACGGTTGACATCCACCTTGGCTCGCAGCTCTGCGAGGCA GCCTGAGGTGACAAAGCCGG
Product: putative integral membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 516; Mature: 516
Protein sequence:
>516_residues MEHNRRGIGVIALGAAAAAGYALLASLRVINNSLSATFRVGSGATMIGASLSLALIGVGHLVGVTVGVAMIVGLAIAFGV MLPIRTAGQLPPDGDYAVAVARIFSTDVRFIGAGAIAVAAAWTFLKILGPILRGIADAAVSARTRRRGQAVGQTERDIPI HIVAMVVLLSLIPIGWLLADFTDGTPLDDRRPGAIAAGVLLVLVIGLMVAAVCGYMAGLIGSSNSPISGVGILVVVLAGL LIKTAYGPATGSQIPALVAYTVFTAALVFGVATISNDNLQDLKTGQLVGATPWKQQVALIIGVLVGSVVMAPILQLMQAG FGFQGAPGATANALAAPQAALMSALAKGVFGGSLNWSLVGVGALTGVIAVALDETLAKTTTNLRLPPLAVGMGMYLPAAL TLMIPIGAFLGRIYDSWARWSGDDDERKKRLGVMLATGLIVGESLYGVLFAVIVATTGKEEPLAMVGDGFRFASQPLGAI VFAGLLAWLYQRTRVTASYRLAAPAGSSKPLPDLPG
Sequences:
>Translated_516_residues MEHNRRGIGVIALGAAAAAGYALLASLRVINNSLSATFRVGSGATMIGASLSLALIGVGHLVGVTVGVAMIVGLAIAFGV MLPIRTAGQLPPDGDYAVAVARIFSTDVRFIGAGAIAVAAAWTFLKILGPILRGIADAAVSARTRRRGQAVGQTERDIPI HIVAMVVLLSLIPIGWLLADFTDGTPLDDRRPGAIAAGVLLVLVIGLMVAAVCGYMAGLIGSSNSPISGVGILVVVLAGL LIKTAYGPATGSQIPALVAYTVFTAALVFGVATISNDNLQDLKTGQLVGATPWKQQVALIIGVLVGSVVMAPILQLMQAG FGFQGAPGATANALAAPQAALMSALAKGVFGGSLNWSLVGVGALTGVIAVALDETLAKTTTNLRLPPLAVGMGMYLPAAL TLMIPIGAFLGRIYDSWARWSGDDDERKKRLGVMLATGLIVGESLYGVLFAVIVATTGKEEPLAMVGDGFRFASQPLGAI VFAGLLAWLYQRTRVTASYRLAAPAGSSKPLPDLPG >Mature_516_residues MEHNRRGIGVIALGAAAAAGYALLASLRVINNSLSATFRVGSGATMIGASLSLALIGVGHLVGVTVGVAMIVGLAIAFGV MLPIRTAGQLPPDGDYAVAVARIFSTDVRFIGAGAIAVAAAWTFLKILGPILRGIADAAVSARTRRRGQAVGQTERDIPI HIVAMVVLLSLIPIGWLLADFTDGTPLDDRRPGAIAAGVLLVLVIGLMVAAVCGYMAGLIGSSNSPISGVGILVVVLAGL LIKTAYGPATGSQIPALVAYTVFTAALVFGVATISNDNLQDLKTGQLVGATPWKQQVALIIGVLVGSVVMAPILQLMQAG FGFQGAPGATANALAAPQAALMSALAKGVFGGSLNWSLVGVGALTGVIAVALDETLAKTTTNLRLPPLAVGMGMYLPAAL TLMIPIGAFLGRIYDSWARWSGDDDERKKRLGVMLATGLIVGESLYGVLFAVIVATTGKEEPLAMVGDGFRFASQPLGAI VFAGLLAWLYQRTRVTASYRLAAPAGSSKPLPDLPG
Specific function: Unknown
COG id: COG1297
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oligopeptide OPT transporter family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004814 - InterPro: IPR004813 [H]
Pfam domain/function: PF03169 OPT [H]
EC number: NA
Molecular weight: Translated: 52631; Mature: 52631
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHNRRGIGVIALGAAAAAGYALLASLRVINNSLSATFRVGSGATMIGASLSLALIGVGH CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHH LVGVTVGVAMIVGLAIAFGVMLPIRTAGQLPPDGDYAVAVARIFSTDVRFIGAGAIAVAA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHH AWTFLKILGPILRGIADAAVSARTRRRGQAVGQTERDIPIHIVAMVVLLSLIPIGWLLAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FTDGTPLDDRRPGAIAAGVLLVLVIGLMVAAVCGYMAGLIGSSNSPISGVGILVVVLAGL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LIKTAYGPATGSQIPALVAYTVFTAALVFGVATISNDNLQDLKTGQLVGATPWKQQVALI HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEECCCCHHHHHHHH IGVLVGSVVMAPILQLMQAGFGFQGAPGATANALAAPQAALMSALAKGVFGGSLNWSLVG HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCCEEE VGALTGVIAVALDETLAKTTTNLRLPPLAVGMGMYLPAALTLMIPIGAFLGRIYDSWARW HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SGDDDERKKRLGVMLATGLIVGESLYGVLFAVIVATTGKEEPLAMVGDGFRFASQPLGAI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHCCCHHHH VFAGLLAWLYQRTRVTASYRLAAPAGSSKPLPDLPG HHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure MEHNRRGIGVIALGAAAAAGYALLASLRVINNSLSATFRVGSGATMIGASLSLALIGVGH CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHH LVGVTVGVAMIVGLAIAFGVMLPIRTAGQLPPDGDYAVAVARIFSTDVRFIGAGAIAVAA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHH AWTFLKILGPILRGIADAAVSARTRRRGQAVGQTERDIPIHIVAMVVLLSLIPIGWLLAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FTDGTPLDDRRPGAIAAGVLLVLVIGLMVAAVCGYMAGLIGSSNSPISGVGILVVVLAGL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LIKTAYGPATGSQIPALVAYTVFTAALVFGVATISNDNLQDLKTGQLVGATPWKQQVALI HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEECCCCHHHHHHHH IGVLVGSVVMAPILQLMQAGFGFQGAPGATANALAAPQAALMSALAKGVFGGSLNWSLVG HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCCEEE VGALTGVIAVALDETLAKTTTNLRLPPLAVGMGMYLPAALTLMIPIGAFLGRIYDSWARW HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SGDDDERKKRLGVMLATGLIVGESLYGVLFAVIVATTGKEEPLAMVGDGFRFASQPLGAI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHCCCHHHH VFAGLLAWLYQRTRVTASYRLAAPAGSSKPLPDLPG HHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]