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The map label for this gene is rpfD

Identifier: 121638268

GI number: 121638268

Start: 2648270

End: 2648734

Strand: Reverse

Name: rpfD

Synonym: BCG_2403c

Alternate gene names: NA

Gene position: 2648734-2648270 (Counterclockwise)

Preceding gene: 121638269

Following gene: 121638267

Centisome position: 60.55

GC content: 60.86

Gene sequence:

>465_bases
ATGACACCGGGTTTGCTTACTACTGCGGGTGCTGGCCGACCACGTGACAGGTGCGCCAGGATCGTATGCACGGTGTTCAT
CGAAACCGCCGTTGTCGCGACCATGTTTGTCGCGTTGTTGGGTCTGTCCACCATCAGCTCGAAAGCCGACGACATCGATT
GGGACGCCATCGCGCAATGCGAATCCGGCGGCAATTGGGCGGCCAACACCGGTAACGGGTTATACGGTGGTCTGCAGATC
AGCCAGGCGACGTGGGATTCCAACGGTGGTGTCGGGTCGCCGGCGGCCGCGAGTCCCCAGCAACAGATCGAGGTCGCAGA
CAACATTATGAAAACCCAAGGCCCGGGTGCGTGGCCGAAATGTAGTTCTTGTAGTCAGGGAGACGCACCGCTGGGCTCGC
TCACCCACATCCTGACGTTCCTCGCGGCCGAGACTGGAGGTTGTTCGGGGAGCAGGGACGATTGA

Upstream 100 bases:

>100_bases
GCAACCGGAACAGCCCAACGCCGCAGATCGACCGCAGTCGGATCAAGGTGATCATGGACAAGGTGAACGGCCGCTGGCTG
GCCAGCAAGGTGGAGCTGCT

Downstream 100 bases:

>100_bases
GGTGTGCCTGCGTTACATTGCTGGCCACCCTAGCTGGTACGCGCTATGCGATGATTTGGCATGGTATTTCGGCAGGCACC
AGTTGAGCTGCCCGGCCTGG

Product: putative resuscitation-promoting factor rpfD

Products: NA

Alternate protein names: Transglycosylase Domain-Containing Protein; Transglycosylase Domain Protein; Resuscitation-Promoting Factor RpfA; Resuscitation-Promoting Factor; Resuscitation-Promoting Factor RpfB; Transglycosylase-Like Protein; Peptidase; Transglycosylase Family Protein; Transglycosylase-Like Domain Protein; M23 Family Secreted Peptidase; M23 Peptidase Domain-Containing Protein; Resuscitation-Promoting Factor RpfC; N-Acetylmuramoyl-L-Alanine Amidase; Resuscitation-Promoting Factor RpfE; Resuscitation-Promoting Factor-Like Protein; Transglycosylase; Resuscitation-Promoting Factor Rpfe; Resuscitation-Promoting Factor RpfD; FG-GAP Repeat Domain-Containing Protein; Secreted Esterase; Resuscitation-Promoting Factor Rpfd; LOW QUALITY PROTEIN Lipoprotein; Resuscitation-Promoting Factor Rpfb; Secreted Transglycosydase; G5 Domain Transglycosylase; Resuscitation-Promoting Factor Rpfa; Vegetative Cell Wall; Cell Wall Catabolism Protein; FHA Domain-Containing Protein; Cell Wall Function Protein; Transglycosylase-Like Domain-Containing Protein; Resuscitation-Promoting Factor Rpfc; Lipoprotein; M24/M37 Family Peptidase

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MTPGLLTTAGAGRPRDRCARIVCTVFIETAVVATMFVALLGLSTISSKADDIDWDAIAQCESGGNWAANTGNGLYGGLQI
SQATWDSNGGVGSPAAASPQQQIEVADNIMKTQGPGAWPKCSSCSQGDAPLGSLTHILTFLAAETGGCSGSRDD

Sequences:

>Translated_154_residues
MTPGLLTTAGAGRPRDRCARIVCTVFIETAVVATMFVALLGLSTISSKADDIDWDAIAQCESGGNWAANTGNGLYGGLQI
SQATWDSNGGVGSPAAASPQQQIEVADNIMKTQGPGAWPKCSSCSQGDAPLGSLTHILTFLAAETGGCSGSRDD
>Mature_153_residues
TPGLLTTAGAGRPRDRCARIVCTVFIETAVVATMFVALLGLSTISSKADDIDWDAIAQCESGGNWAANTGNGLYGGLQIS
QATWDSNGGVGSPAAASPQQQIEVADNIMKTQGPGAWPKCSSCSQGDAPLGSLTHILTFLAAETGGCSGSRDD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15679; Mature: 15547

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPGLLTTAGAGRPRDRCARIVCTVFIETAVVATMFVALLGLSTISSKADDIDWDAIAQC
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
ESGGNWAANTGNGLYGGLQISQATWDSNGGVGSPAAASPQQQIEVADNIMKTQGPGAWPK
CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
CSSCSQGDAPLGSLTHILTFLAAETGGCSGSRDD
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TPGLLTTAGAGRPRDRCARIVCTVFIETAVVATMFVALLGLSTISSKADDIDWDAIAQC
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
ESGGNWAANTGNGLYGGLQISQATWDSNGGVGSPAAASPQQQIEVADNIMKTQGPGAWPK
CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
CSSCSQGDAPLGSLTHILTFLAAETGGCSGSRDD
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA