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The map label for this gene is PE_PGRS39 [H]

Identifier: 121638228

GI number: 121638228

Start: 2594764

End: 2596005

Strand: Reverse

Name: PE_PGRS39 [H]

Synonym: BCG_2363c

Alternate gene names: 121638228

Gene position: 2596005-2594764 (Counterclockwise)

Preceding gene: 121638231

Following gene: 121638225

Centisome position: 59.34

GC content: 70.85

Gene sequence:

>1242_bases
ATGTCGCACGTTACCGCGGCCCCGAACGTTCTGGCGGCGTCGGCCGGGGAGCTAGCCGCGATCGGCTCCACTATGCGCGC
GGCCAACGCCGCTGCGGCCGCCCCGACGGCAGGAGTGCTGGCTGCCGGCGGCGATGACGTGTCGGCTGGCATCGCGGCGT
TGTTTGGCGCGCGGGCGCAGGCCTATCAGGCCATTAGCGCTCAAGCGGCGCTGTTTCACGACCGGTTTGTACAGATCCTG
CAAGAGGGCGCGGCGGCGTATGCCATGGCTGAGGCCGCCAACGCCTTGCCGCTGCAGAAAGCGCAGGGCGTGGTCAGCGA
ACTCGCCCAAGATCGCACTGGGGGGACGGGCACCGGGCAATCTCGCGGTGCCGGCGGGTTTGGCGGTGTCGGCCAGGCTG
GCGGAAAGGGCTGGGACGGCGGACCGATCGGCAACGGTCAGGTCGGCGAGCAGCATGGGGCCGGCCAGCTCGGCAGCACC
GACGGTAACCCCGGAGTGGCTGGCGCCGCGCACGGCAGCGGCGTTTCTGCTTCGCACGGCAGCGGCGCAACAGGTGCCGC
CGGTGTCGCGGACCCGGGTGGCAGTGGTGCTGGGGTCGGTAGCGCAGCCGGCAATGGGACTGGGGCCGGCAGCGCAGACG
CAGTCGGTGGTGCCGGGACTGGCACGGACATCGTCGGGTCTGTTCGCGGGGACGGCGGAGTCGGCATGGCCAGCGGTGAC
GGCGGTCTGAGCACCGGCGCTGCGGGCGCTTCTGCTGAGGGCGGGTTGATGCCCGGCTTCGGTGGGGCTCCGTGGGTTGG
CGGGCACTGGGGGCTCGGCGGTGAAGGCCATTCCGGTGCTATCGGCGGAGTGGGTGAACAGGTGGCACCTGCGGTAGCCA
CGGCACCTGCGGTGTCGCCGGCTACCACGTCTGCGGTGGCAGCCGAATCCGGCTCGACGCCGGCGACCAAGGCGCAGGCG
ATGCACGCGACGACCAACCCCGGCAACGCGGCACACCAGGGCAACCCGGCCGACCCGGGCAACTCGGCGCGCCGGGCTGA
TGGCGGGCGCGATGAGCAGCTACTGCTTCTTCCGTTGACGAGTCTTCGGGGGTTGCGCCACACGCTAAAGAAGTTGTCCG
GGCTTCGAGCTCGAAATGGGCTGCTGACAGCATCCGGCGACAATGCTAGTGGCAGCGGCCGGCCGTGGGACCGCGACCAA
CTGCTGCGCGCTCTTGGTCTTCGACCGCCCGGGCACGAATGA

Upstream 100 bases:

>100_bases
TGGGATGTTCCTGGTCGATCGCGATAGGATTCGCGGTGACAACGCGGGTCGACCAGCGATCCGGTCACAGCGAGTTGGCA
ACACGGGCAGGTGCTCGCTT

Downstream 100 bases:

>100_bases
GCGATCGCGCCTGTGCGCAAGGCCGCGTTGCCGGTCGCATGGTCGACGAACACCCCGGGCGCCGATCACGGCACCGAAGT
GCATATCAACCCCGGTGCAG

Product: PE-PGRS family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 412

Protein sequence:

>413_residues
MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQAYQAISAQAALFHDRFVQIL
QEGAAAYAMAEAANALPLQKAQGVVSELAQDRTGGTGTGQSRGAGGFGGVGQAGGKGWDGGPIGNGQVGEQHGAGQLGST
DGNPGVAGAAHGSGVSASHGSGATGAAGVADPGGSGAGVGSAAGNGTGAGSADAVGGAGTGTDIVGSVRGDGGVGMASGD
GGLSTGAAGASAEGGLMPGFGGAPWVGGHWGLGGEGHSGAIGGVGEQVAPAVATAPAVSPATTSAVAAESGSTPATKAQA
MHATTNPGNAAHQGNPADPGNSARRADGGRDEQLLLLPLTSLRGLRHTLKKLSGLRARNGLLTASGDNASGSGRPWDRDQ
LLRALGLRPPGHE

Sequences:

>Translated_413_residues
MSHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQAYQAISAQAALFHDRFVQIL
QEGAAAYAMAEAANALPLQKAQGVVSELAQDRTGGTGTGQSRGAGGFGGVGQAGGKGWDGGPIGNGQVGEQHGAGQLGST
DGNPGVAGAAHGSGVSASHGSGATGAAGVADPGGSGAGVGSAAGNGTGAGSADAVGGAGTGTDIVGSVRGDGGVGMASGD
GGLSTGAAGASAEGGLMPGFGGAPWVGGHWGLGGEGHSGAIGGVGEQVAPAVATAPAVSPATTSAVAAESGSTPATKAQA
MHATTNPGNAAHQGNPADPGNSARRADGGRDEQLLLLPLTSLRGLRHTLKKLSGLRARNGLLTASGDNASGSGRPWDRDQ
LLRALGLRPPGHE
>Mature_412_residues
SHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQAYQAISAQAALFHDRFVQILQ
EGAAAYAMAEAANALPLQKAQGVVSELAQDRTGGTGTGQSRGAGGFGGVGQAGGKGWDGGPIGNGQVGEQHGAGQLGSTD
GNPGVAGAAHGSGVSASHGSGATGAAGVADPGGSGAGVGSAAGNGTGAGSADAVGGAGTGTDIVGSVRGDGGVGMASGDG
GLSTGAAGASAEGGLMPGFGGAPWVGGHWGLGGEGHSGAIGGVGEQVAPAVATAPAVSPATTSAVAAESGSTPATKAQAM
HATTNPGNAAHQGNPADPGNSARRADGGRDEQLLLLPLTSLRGLRHTLKKLSGLRARNGLLTASGDNASGSGRPWDRDQL
LRALGLRPPGHE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mycobacterial PE family. PGRS subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000084 [H]

Pfam domain/function: PF00934 PE [H]

EC number: NA

Molecular weight: Translated: 38668; Mature: 38536

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHCCHHHCCEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SHVTAAPNVLAASAGELAAIGSTMRAANAAAAAPTAGVLAAGGDDVSAGIAALFGARAQ
CCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHH
AYQAISAQAALFHDRFVQILQEGAAAYAMAEAANALPLQKAQGVVSELAQDRTGGTGTGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC
SRGAGGFGGVGQAGGKGWDGGPIGNGQVGEQHGAGQLGSTDGNPGVAGAAHGSGVSASHG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SGATGAAGVADPGGSGAGVGSAAGNGTGAGSADAVGGAGTGTDIVGSVRGDGGVGMASGD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEECCCCCEEECCCC
GGLSTGAAGASAEGGLMPGFGGAPWVGGHWGLGGEGHSGAIGGVGEQVAPAVATAPAVSP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC
ATTSAVAAESGSTPATKAQAMHATTNPGNAAHQGNPADPGNSARRADGGRDEQLLLLPLT
CCHHHHHHCCCCCCCHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHH
SLRGLRHTLKKLSGLRARNGLLTASGDNASGSGRPWDRDQLLRALGLRPPGHE
HHHHHHHHHHHHHCCHHHCCEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]