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The map label for this gene is asnC [C]

Identifier: 121638210

GI number: 121638210

Start: 2573429

End: 2573875

Strand: Direct

Name: asnC [C]

Synonym: BCG_2345

Alternate gene names: 121638210

Gene position: 2573429-2573875 (Clockwise)

Preceding gene: 121638204

Following gene: 121638213

Centisome position: 58.83

GC content: 65.55

Gene sequence:

>447_bases
ATGGACCGCCTGGATGACACCGACGAACGCATCCTCGCCGAGCTGGCCGAGCATGCACGGGCCACCTTCGCCGAGATCGG
TCACAAGGTGAGTTTGTCCGCTCCGGCGGTGAAGCGCCGCGTCGACCGGATGCTCGAGAGCGGCGTCATCAAGGGCTTCA
CCACGGTGGTCGACCGCAACGCGCTCGGCTGGAACACCGAGGCTTACGTGCAGATCTTCTGCCACGGCAGGATTGCGCCT
GATCAGCTGCGTGCCGCCTGGGTGAATATCCCCGAGGTGGTCAGCGCGGCAACGGTGACTGGCACGTCCGACGCGATCCT
GCACGTGCTCGCTCATGACATGCGGCATCTGGAGGCCGCCCTCGAGCGCATCCGGTCCAGCGCTGACGTCGAACGCAGCG
AAAGCACCGTCGTGCTGTCAAACCTCATCGACCGCATGCCGCCCTAG

Upstream 100 bases:

>100_bases
TTCACAATCAAACGATGGTCGTTGCGTATTTTCCATTGATACATTGCGTTAACCTCGAATCTGTGGTGATTCGTTGCGTG
CTTAGAACGGAGGAGGGCCG

Downstream 100 bases:

>100_bases
TGTTCCGCGCCAATGCTAGAAAAGGCCTGCTGAGCTACGTAGACGCAGCATGAGCAGGTCCTCGCGCCGCCAACCCGCGA
AACGGCGCGTCTGTACACCG

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MDRLDDTDERILAELAEHARATFAEIGHKVSLSAPAVKRRVDRMLESGVIKGFTTVVDRNALGWNTEAYVQIFCHGRIAP
DQLRAAWVNIPEVVSAATVTGTSDAILHVLAHDMRHLEAALERIRSSADVERSESTVVLSNLIDRMPP

Sequences:

>Translated_148_residues
MDRLDDTDERILAELAEHARATFAEIGHKVSLSAPAVKRRVDRMLESGVIKGFTTVVDRNALGWNTEAYVQIFCHGRIAP
DQLRAAWVNIPEVVSAATVTGTSDAILHVLAHDMRHLEAALERIRSSADVERSESTVVLSNLIDRMPP
>Mature_148_residues
MDRLDDTDERILAELAEHARATFAEIGHKVSLSAPAVKRRVDRMLESGVIKGFTTVVDRNALGWNTEAYVQIFCHGRIAP
DQLRAAWVNIPEVVSAATVTGTSDAILHVLAHDMRHLEAALERIRSSADVERSESTVVLSNLIDRMPP

Specific function: Activator Of Asna Transcription; Autogenous Regulator Of Its Own Transcription; And Repressor Of The Expression Of Gida At A Post-Transcriptional Level. [C]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR013196
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg; PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 16352; Mature: 16352

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRLDDTDERILAELAEHARATFAEIGHKVSLSAPAVKRRVDRMLESGVIKGFTTVVDRN
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
ALGWNTEAYVQIFCHGRIAPDQLRAAWVNIPEVVSAATVTGTSDAILHVLAHDMRHLEAA
CCCCCCHHHEEEEECCCCCHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LERIRSSADVERSESTVVLSNLIDRMPP
HHHHHHHCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MDRLDDTDERILAELAEHARATFAEIGHKVSLSAPAVKRRVDRMLESGVIKGFTTVVDRN
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
ALGWNTEAYVQIFCHGRIAPDQLRAAWVNIPEVVSAATVTGTSDAILHVLAHDMRHLEAA
CCCCCCHHHEEEEECCCCCHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LERIRSSADVERSESTVVLSNLIDRMPP
HHHHHHHCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA