Click here to switch to the map view.

The map label for this gene is 121638196

Identifier: 121638196

GI number: 121638196

Start: 2560530

End: 2560874

Strand: Direct

Name: 121638196

Synonym: BCG_2331

Alternate gene names: NA

Gene position: 2560530-2560874 (Clockwise)

Preceding gene: 121638195

Following gene: 121638197

Centisome position: 58.53

GC content: 70.14

Gene sequence:

>345_bases
GTGGTGGCTGCGCTGCACGCCGGCAAGGCGGTGACCATCGCGCCGCAGAGCATGACGCTGACCACCCAGCAGGCCGCCGA
CCTTCTCGGGGTGAGTCGTCCGACCGTGGTGCGTCTGATCAAGAGCGGCGAGCTGGCCGCCGAGCGCATCGGGAATCGCC
ACCGGCTCGTGCTCGACGACGTGTTGGCCTACCGGGAGGCCCGCCGGCAGCGCCAGTACGACGCGCTTGCCGAGAGCGCA
ATGGACATCGACGCCGACGAGGATCCCGAGGTGATTTGCGAGCAGTTGCGTGAGGCGCGGCGTGTTGTCGCCGCGCGCCG
TAGAACTGAGCGGCGGCGCGCCTGA

Upstream 100 bases:

>100_bases
GGCGGCGCGGCCGCACGCTGGCCCCCAGCTACGCGCTGGTGGGCGCCACGAGCACGACCGCGTCGAGCTGCCGCGCGAGG
TTCATCAGGCGCTAAGGCAG

Downstream 100 bases:

>100_bases
GACCATCGCTGCATGCTCGACACGTCGCTGCTGTGGTCAAGCCGGCAGCGCGACTTTCTGTTGTCGTTGGCGACGTCGCC
GCGAACTACGACGGGCGGGT

Product: putative excisionase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MVAALHAGKAVTIAPQSMTLTTQQAADLLGVSRPTVVRLIKSGELAAERIGNRHRLVLDDVLAYREARRQRQYDALAESA
MDIDADEDPEVICEQLREARRVVAARRRTERRRA

Sequences:

>Translated_114_residues
MVAALHAGKAVTIAPQSMTLTTQQAADLLGVSRPTVVRLIKSGELAAERIGNRHRLVLDDVLAYREARRQRQYDALAESA
MDIDADEDPEVICEQLREARRVVAARRRTERRRA
>Mature_114_residues
MVAALHAGKAVTIAPQSMTLTTQQAADLLGVSRPTVVRLIKSGELAAERIGNRHRLVLDDVLAYREARRQRQYDALAESA
MDIDADEDPEVICEQLREARRVVAARRRTERRRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2310_MYCTU (P64987)

Other databases:

- EMBL:   BX842579
- EMBL:   AE000516
- PIR:   G70702
- RefSeq:   NP_216826.1
- RefSeq:   NP_336851.1
- EnsemblBacteria:   EBMYCT00000000247
- EnsemblBacteria:   EBMYCT00000071524
- GeneID:   885175
- GeneID:   924040
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT2372
- KEGG:   mtu:Rv2310
- TIGR:   MT2372
- TubercuList:   Rv2310
- GeneTree:   EBGT00050000018572
- HOGENOM:   HBG565241
- OMA:   MDILEAM
- ProtClustDB:   CLSK791771
- InterPro:   IPR009061
- InterPro:   IPR011991
- InterPro:   IPR010093
- Gene3D:   G3DSA:1.10.10.10
- TIGRFAMs:   TIGR01764

Pfam domain/function: SSF46955 Putativ_DNA_bind

EC number: NA

Molecular weight: Translated: 12776; Mature: 12776

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAALHAGKAVTIAPQSMTLTTQQAADLLGVSRPTVVRLIKSGELAAERIGNRHRLVLDD
CCCCCCCCCEEEECCCCEEHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHH
VLAYREARRQRQYDALAESAMDIDADEDPEVICEQLREARRVVAARRRTERRRA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVAALHAGKAVTIAPQSMTLTTQQAADLLGVSRPTVVRLIKSGELAAERIGNRHRLVLDD
CCCCCCCCCEEEECCCCEEHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHH
VLAYREARRQRQYDALAESAMDIDADEDPEVICEQLREARRVVAARRRTERRRA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036