| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121638181
Identifier: 121638181
GI number: 121638181
Start: 2549171
End: 2550103
Strand: Reverse
Name: 121638181
Synonym: BCG_2316c
Alternate gene names: NA
Gene position: 2550103-2549171 (Counterclockwise)
Preceding gene: 121638184
Following gene: 121638180
Centisome position: 58.29
GC content: 64.74
Gene sequence:
>933_bases ATGGTAGCGACCCGCGGCCGCCCGTGCCCGACCAATTTTTCCAGGCCGCAGCGGCCCCGAGTGGCCGGCAATGGCACAAA GTCCCAGCGGTGTCGCGGTAGGTTGACGACCAGTATGTTAGGTGTCGCCCCCGAAGCGAAGGGACCGCCGGTGAAGGTCC ACCACCTCAACTGCGGCACCATGAATGCATTTGGCATCGCTCTGTTATGCCACGTTCTGCTCGTCGAGACCGACGATGGA TTGGTGCTGGTGGACACCGGCTTCGGTATCCAGGACTGCCTTGACCCCGGCCGGGTAGGTCTATTCCGTCATGTCCTGCG GCCGGCATTCTTGCAGGCCGAAACCGCGGCCCGCCAGATCGAACAGCTCGGCTACCGCACGTCCGACGTTCGACACATTG TGCTCACCCACTTCGACTTCGACCACATCGGCGGGATCGCCGACTTCCCCGAGGCTCACCTCCACGTCACCGCCGCCGAA GCCCGCGGTGCCATCCACGCCCCTTCGCTCCGCGAGCGACTGCGATATCGACGCGGACAGTGGGCCCATGGCCCGAAGCT GGTGGAGCACGGTCCCGACGGGGAACCCTGGCGCGGATTCGCATCGGCCAAACCCCTCGATTCCATCGGCACCGGTGTCG TTCTGGTGCCGATGCCCGGTCACACCCGCGGGCACGCCGCGGTAGCTGTCGATGCCGGTCACCGCTGGGTTTTGCACTGC GGCGACGCCTTCTATCATCGCGGCACCCTCGATGGCCGGTTCCGGGTGCCCTTCGTGATGCGGGCCGAGGAAAAGCTGTT GTCGTATAACCGCAACCAACTGCGCGACAACCAGGCCCGAATCGTCGAACTCCATCGACGCCACGACCCGGATCTACTCA TCGTCTGCGCACACGATCCCGACCTCTATCAGCTTGCTCGCGATACGGCCTAG
Upstream 100 bases:
>100_bases CGGGAACGGTGATGGGAGTAAGCAGAAGCACCGCGGCCAGCATTGCGGCGGCCGCGCCCATGGTGAGCAGTCGGCGGGTC AGTAAATCATTCACAGTGGG
Downstream 100 bases:
>100_bases CCAGGCCACCCCCAGCTCGGCGCCGGATCGCAGCTCGCTAAATTCGAGTCGCTATGTCGTCGGAAGGAATCTCATGAACG CCCATGTCGAGCAGTTGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MVATRGRPCPTNFSRPQRPRVAGNGTKSQRCRGRLTTSMLGVAPEAKGPPVKVHHLNCGTMNAFGIALLCHVLLVETDDG LVLVDTGFGIQDCLDPGRVGLFRHVLRPAFLQAETAARQIEQLGYRTSDVRHIVLTHFDFDHIGGIADFPEAHLHVTAAE ARGAIHAPSLRERLRYRRGQWAHGPKLVEHGPDGEPWRGFASAKPLDSIGTGVVLVPMPGHTRGHAAVAVDAGHRWVLHC GDAFYHRGTLDGRFRVPFVMRAEEKLLSYNRNQLRDNQARIVELHRRHDPDLLIVCAHDPDLYQLARDTA
Sequences:
>Translated_310_residues MVATRGRPCPTNFSRPQRPRVAGNGTKSQRCRGRLTTSMLGVAPEAKGPPVKVHHLNCGTMNAFGIALLCHVLLVETDDG LVLVDTGFGIQDCLDPGRVGLFRHVLRPAFLQAETAARQIEQLGYRTSDVRHIVLTHFDFDHIGGIADFPEAHLHVTAAE ARGAIHAPSLRERLRYRRGQWAHGPKLVEHGPDGEPWRGFASAKPLDSIGTGVVLVPMPGHTRGHAAVAVDAGHRWVLHC GDAFYHRGTLDGRFRVPFVMRAEEKLLSYNRNQLRDNQARIVELHRRHDPDLLIVCAHDPDLYQLARDTA >Mature_310_residues MVATRGRPCPTNFSRPQRPRVAGNGTKSQRCRGRLTTSMLGVAPEAKGPPVKVHHLNCGTMNAFGIALLCHVLLVETDDG LVLVDTGFGIQDCLDPGRVGLFRHVLRPAFLQAETAARQIEQLGYRTSDVRHIVLTHFDFDHIGGIADFPEAHLHVTAAE ARGAIHAPSLRERLRYRRGQWAHGPKLVEHGPDGEPWRGFASAKPLDSIGTGVVLVPMPGHTRGHAAVAVDAGHRWVLHC GDAFYHRGTLDGRFRVPFVMRAEEKLLSYNRNQLRDNQARIVELHRRHDPDLLIVCAHDPDLYQLARDTA
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2300_MYCTU (P64981)
Other databases:
- EMBL: BX842579 - EMBL: AE000516 - PIR: H70733 - RefSeq: NP_216816.1 - RefSeq: NP_336828.1 - ProteinModelPortal: P64981 - EnsemblBacteria: EBMYCT00000002265 - EnsemblBacteria: EBMYCT00000070042 - GeneID: 887880 - GeneID: 924064 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2357 - KEGG: mtu:Rv2300c - TIGR: MT2357 - TubercuList: Rv2300c - GeneTree: EBGT00050000017234 - HOGENOM: HBG369977 - OMA: RVHHLNC - ProtClustDB: CLSK872045 - InterPro: IPR001279 - SMART: SM00849
Pfam domain/function: PF00753 Lactamase_B
EC number: NA
Molecular weight: Translated: 34353; Mature: 34353
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVATRGRPCPTNFSRPQRPRVAGNGTKSQRCRGRLTTSMLGVAPEAKGPPVKVHHLNCGT CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCC MNAFGIALLCHVLLVETDDGLVLVDTGFGIQDCLDPGRVGLFRHVLRPAFLQAETAARQI CHHHHHHHHHHHHEEECCCCEEEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH EQLGYRTSDVRHIVLTHFDFDHIGGIADFPEAHLHVTAAEARGAIHAPSLRERLRYRRGQ HHHCCCCCCCEEEEEEECCHHHHCCCCCCCCCEEEEEEHHCCCCCCCHHHHHHHHHHCCC WAHGPKLVEHGPDGEPWRGFASAKPLDSIGTGVVLVPMPGHTRGHAAVAVDAGHRWVLHC CCCCCCHHHCCCCCCCCCCCCCCCCCHHCCCCEEEEECCCCCCCCEEEEEECCCEEEEEE GDAFYHRGTLDGRFRVPFVMRAEEKLLSYNRNQLRDNQARIVELHRRHDPDLLIVCAHDP CCHHEECCCCCCEEECCEEECHHHHHHHCCHHHHCCCHHHHHHHHHCCCCCEEEEECCCC DLYQLARDTA HHHHHHHCCC >Mature Secondary Structure MVATRGRPCPTNFSRPQRPRVAGNGTKSQRCRGRLTTSMLGVAPEAKGPPVKVHHLNCGT CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCC MNAFGIALLCHVLLVETDDGLVLVDTGFGIQDCLDPGRVGLFRHVLRPAFLQAETAARQI CHHHHHHHHHHHHEEECCCCEEEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH EQLGYRTSDVRHIVLTHFDFDHIGGIADFPEAHLHVTAAEARGAIHAPSLRERLRYRRGQ HHHCCCCCCCEEEEEEECCHHHHCCCCCCCCCEEEEEEHHCCCCCCCHHHHHHHHHHCCC WAHGPKLVEHGPDGEPWRGFASAKPLDSIGTGVVLVPMPGHTRGHAAVAVDAGHRWVLHC CCCCCCHHHCCCCCCCCCCCCCCCCCHHCCCCEEEEECCCCCCCCEEEEEECCCEEEEEE GDAFYHRGTLDGRFRVPFVMRAEEKLLSYNRNQLRDNQARIVELHRRHDPDLLIVCAHDP CCHHEECCCCCCEEECCEEECHHHHHHHCCHHHHCCCHHHHHHHHHCCCCCEEEEECCCC DLYQLARDTA HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036