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The map label for this gene is rpfC

Identifier: 121637788

GI number: 121637788

Start: 2134706

End: 2135236

Strand: Reverse

Name: rpfC

Synonym: BCG_1921c

Alternate gene names: NA

Gene position: 2135236-2134706 (Counterclockwise)

Preceding gene: 121637789

Following gene: 121637787

Centisome position: 48.81

GC content: 63.09

Gene sequence:

>531_bases
GTGCATCCTTTGCCGGCCGACCACGGCCGGTCGCGGTGCAATAGACACCCGATCTCACCACTCTCTCTAATCGGTAACGC
TTCGGCCACTTCCGGCGATATGTCGAGCATGACAAGAATCGCCAAGCCGCTCATCAAGTCCGCCATGGCCGCAGGACTCG
TCACGGCATCCATGTCGCTCTCCACCGCCGTTGCCCACGCCGGTCCCAGCCCGAACTGGGACGCCGTCGCGCAGTGCGAA
TCCGGGGGCAACTGGGCGGCCAACACCGGAAACGGCAAATACGGCGGACTGCAGTTCAAGCCGGCCACCTGGGCCGCATT
CGGCGGTGTCGGCAACCCAGCAGCTGCCTCTCGGGAACAACAAATCGCAGTTGCCAATCGGGTTCTCGCCGAACAGGGAT
TGGACGCGTGGCCGACGTGCGGCGCCGCCTCTGGCCTTCCGATCGCACTGTGGTCGAAACCCGCGCAGGGCATCAAGCAA
ATCATCAACGAGATCATTTGGGCAGGCATTCAGGCAAGTATTCCGCGCTGA

Upstream 100 bases:

>100_bases
TAGTGCGGTCCCGCCACCTCGATAGCCTCTATCAACGGGCCCTGACGACAGCAACACAGTCGTATTGCCAGGCCCTACCG
CCGGCCTGATCAATCCGGTT

Downstream 100 bases:

>100_bases
CGGTTGGCGGCGTGTGCGGTCTATGACCAGGTCGACGTATGTGTTTGGATCAGGTCATGGAAGGTTCGGCCACAGTTCAC
ATGGCAGCGCCGCCGGACAA

Product: putative resuscitation-promoting factor rpfC

Products: NA

Alternate protein names: Transglycosylase Domain-Containing Protein; Transglycosylase Domain Protein; Resuscitation-Promoting Factor RpfA; Resuscitation-Promoting Factor; Resuscitation-Promoting Factor RpfB; Transglycosylase-Like Protein; Peptidase; Transglycosylase Family Protein; Transglycosylase-Like Domain Protein; M23 Family Secreted Peptidase; M23 Peptidase Domain-Containing Protein; Resuscitation-Promoting Factor RpfC; Resuscitation-Promoting Factor RpfE; Resuscitation-Promoting Factor-Like Protein; Transglycosylase; Resuscitation-Promoting Factor Rpfe; Resuscitation-Promoting Factor RpfD; N-Acetylmuramoyl-L-Alanine Amidase; FG-GAP Repeat Domain-Containing Protein; Secreted Esterase; Resuscitation-Promoting Factor Rpfd; LOW QUALITY PROTEIN Lipoprotein; Resuscitation-Promoting Factor Rpfb; Secreted Transglycosydase; G5 Domain Transglycosylase; Resuscitation-Promoting Factor Rpfa; Transglycosylase Domain Containing Protein; Vegetative Cell Wall; Cell Wall Catabolism Protein; FHA Domain-Containing Protein; Cell Wall Function Protein; Transglycosylase-Like Domain-Containing Protein; Resuscitation-Promoting Factor Rpfc; Lipoprotein; M24/M37 Family Peptidase

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MHPLPADHGRSRCNRHPISPLSLIGNASATSGDMSSMTRIAKPLIKSAMAAGLVTASMSLSTAVAHAGPSPNWDAVAQCE
SGGNWAANTGNGKYGGLQFKPATWAAFGGVGNPAAASREQQIAVANRVLAEQGLDAWPTCGAASGLPIALWSKPAQGIKQ
IINEIIWAGIQASIPR

Sequences:

>Translated_176_residues
MHPLPADHGRSRCNRHPISPLSLIGNASATSGDMSSMTRIAKPLIKSAMAAGLVTASMSLSTAVAHAGPSPNWDAVAQCE
SGGNWAANTGNGKYGGLQFKPATWAAFGGVGNPAAASREQQIAVANRVLAEQGLDAWPTCGAASGLPIALWSKPAQGIKQ
IINEIIWAGIQASIPR
>Mature_176_residues
MHPLPADHGRSRCNRHPISPLSLIGNASATSGDMSSMTRIAKPLIKSAMAAGLVTASMSLSTAVAHAGPSPNWDAVAQCE
SGGNWAANTGNGKYGGLQFKPATWAAFGGVGNPAAASREQQIAVANRVLAEQGLDAWPTCGAASGLPIALWSKPAQGIKQ
IINEIIWAGIQASIPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18047; Mature: 18047

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPLPADHGRSRCNRHPISPLSLIGNASATSGDMSSMTRIAKPLIKSAMAAGLVTASMSL
CCCCCCCCCHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STAVAHAGPSPNWDAVAQCESGGNWAANTGNGKYGGLQFKPATWAAFGGVGNPAAASREQ
HHHHHHCCCCCCHHHHEEECCCCCCCCCCCCCCCCCEEECCCCHHHHCCCCCCCCCCHHH
QIAVANRVLAEQGLDAWPTCGAASGLPIALWSKPAQGIKQIINEIIWAGIQASIPR
HHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MHPLPADHGRSRCNRHPISPLSLIGNASATSGDMSSMTRIAKPLIKSAMAAGLVTASMSL
CCCCCCCCCHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STAVAHAGPSPNWDAVAQCESGGNWAANTGNGKYGGLQFKPATWAAFGGVGNPAAASREQ
HHHHHHCCCCCCHHHHEEECCCCCCCCCCCCCCCCCEEECCCCHHHHCCCCCCCCCCHHH
QIAVANRVLAEQGLDAWPTCGAASGLPIALWSKPAQGIKQIINEIIWAGIQASIPR
HHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA