| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121637766
Identifier: 121637766
GI number: 121637766
Start: 2111550
End: 2112320
Strand: Reverse
Name: 121637766
Synonym: BCG_1899c
Alternate gene names: NA
Gene position: 2112320-2111550 (Counterclockwise)
Preceding gene: 121637767
Following gene: 121637759
Centisome position: 48.29
GC content: 64.07
Gene sequence:
>771_bases ATGTCTGACCACTTGACTGCTTGCGCAGCCGTTCATCCAGGTCCACTGGTGTCGCACCTCTCGGTGATGCACCGGTTCCG GATATATGTCGACATCGCCGTCGTCGTCCTGGTGCTGGTACTGACGAACCTGATCGCGCATTTCACCACACCGTGGGCGA GCATCGCCACCGTCCCGGCCGCCGCGGTCGGACTGGTGATCTTGGTGCGGAGTAGAGGCCTGGGCTGGGCTGAACTCGGA CTGAGCCGCCAACACTGGAAATCCGGGCTCGTCTATGCGCTAGCGGCCGTTGCCCTGGTGGTGGCGGTGATCTCGGTAGG TGTCCTGCTGCCGATAACCCGGCCGATGTTCATGAACCATCACTACGCGACGATCTCCGGCGCGGTGATCGCCTCGATGG TCATGATCCCGCTGCAAACCGTCATCCCCGAAGAGCTGGCCTTCCGCGGTGTGTTGCATGGGGCGCTGAATCGGGCTTGG GGATTCCGGGGTGTCGCGGTGGCGGGTTCGGTGCTGTTCGGTCTGTGGCATATTGCGACGTCGCTGGGGCTCACGAGCAG CAATGTCGGCTTCACTCGACTGTTCGGTGGCGGGATCATCGGGCTGGTGGCCGGTGTCATGCTGGCGGTGTTGGCCACCG GAGTGGCCGGATTCGTGTTCAGCTGGCTGCGACGGCGCAGCGGCAGCCTGATCGCACCGATCGCACTGCATTGGTCGCTG AACGGGATGGGTGCCCTGGCCGCTGCCCTGGTCTGGCACCTGTCGACCTGA
Upstream 100 bases:
>100_bases CTGCTTCCCCAGCTGTTGGCGGCAGACGCGCTCGCAGCCGAGCTCAAGGCCTACGCGCGAGAGCGGACACCGAGCCCTCC GCCGGTAGACTCTGCTGACG
Downstream 100 bases:
>100_bases GCTCGGTCAGATCAGCAGCACGGCGGCACCGGCGATGCGGCCGGCGCTCAGGTCGCCCAGCGCACGATCGGCTTGGCCAA GCGGGTACTCCGGCGTGGTG
Product: putative integral membrane protein
Products: NA
Alternate protein names: Protease; Peptidase; Conserved Integral Membrane Protein; Integral Membrane Protein; Conserved Membrane Protein
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MSDHLTACAAVHPGPLVSHLSVMHRFRIYVDIAVVVLVLVLTNLIAHFTTPWASIATVPAAAVGLVILVRSRGLGWAELG LSRQHWKSGLVYALAAVALVVAVISVGVLLPITRPMFMNHHYATISGAVIASMVMIPLQTVIPEELAFRGVLHGALNRAW GFRGVAVAGSVLFGLWHIATSLGLTSSNVGFTRLFGGGIIGLVAGVMLAVLATGVAGFVFSWLRRRSGSLIAPIALHWSL NGMGALAAALVWHLST
Sequences:
>Translated_256_residues MSDHLTACAAVHPGPLVSHLSVMHRFRIYVDIAVVVLVLVLTNLIAHFTTPWASIATVPAAAVGLVILVRSRGLGWAELG LSRQHWKSGLVYALAAVALVVAVISVGVLLPITRPMFMNHHYATISGAVIASMVMIPLQTVIPEELAFRGVLHGALNRAW GFRGVAVAGSVLFGLWHIATSLGLTSSNVGFTRLFGGGIIGLVAGVMLAVLATGVAGFVFSWLRRRSGSLIAPIALHWSL NGMGALAAALVWHLST >Mature_255_residues SDHLTACAAVHPGPLVSHLSVMHRFRIYVDIAVVVLVLVLTNLIAHFTTPWASIATVPAAAVGLVILVRSRGLGWAELGL SRQHWKSGLVYALAAVALVVAVISVGVLLPITRPMFMNHHYATISGAVIASMVMIPLQTVIPEELAFRGVLHGALNRAWG FRGVAVAGSVLFGLWHIATSLGLTSSNVGFTRLFGGGIIGLVAGVMLAVLATGVAGFVFSWLRRRSGSLIAPIALHWSLN GMGALAAALVWHLST
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26940; Mature: 26808
Theoretical pI: Translated: 12.00; Mature: 12.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDHLTACAAVHPGPLVSHLSVMHRFRIYVDIAVVVLVLVLTNLIAHFTTPWASIATVPA CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH AAVGLVILVRSRGLGWAELGLSRQHWKSGLVYALAAVALVVAVISVGVLLPITRPMFMNH HHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC HYATISGAVIASMVMIPLQTVIPEELAFRGVLHGALNRAWGFRGVAVAGSVLFGLWHIAT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH SLGLTSSNVGFTRLFGGGIIGLVAGVMLAVLATGVAGFVFSWLRRRSGSLIAPIALHWSL HHCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHEEEECC NGMGALAAALVWHLST CCHHHHHHHHHHHCCC >Mature Secondary Structure SDHLTACAAVHPGPLVSHLSVMHRFRIYVDIAVVVLVLVLTNLIAHFTTPWASIATVPA CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH AAVGLVILVRSRGLGWAELGLSRQHWKSGLVYALAAVALVVAVISVGVLLPITRPMFMNH HHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC HYATISGAVIASMVMIPLQTVIPEELAFRGVLHGALNRAWGFRGVAVAGSVLFGLWHIAT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH SLGLTSSNVGFTRLFGGGIIGLVAGVMLAVLATGVAGFVFSWLRRRSGSLIAPIALHWSL HHCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHEEEECC NGMGALAAALVWHLST CCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA