| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121637748
Identifier: 121637748
GI number: 121637748
Start: 2096177
End: 2097127
Strand: Reverse
Name: 121637748
Synonym: BCG_1881c
Alternate gene names: NA
Gene position: 2097127-2096177 (Counterclockwise)
Preceding gene: 121637749
Following gene: 121637747
Centisome position: 47.94
GC content: 72.24
Gene sequence:
>951_bases GTGTCCGCGCTGGCCTTCACCATCCTCGCGGTGCTGCTGGCTGGCCCGACCCCAGCCCTGCTAGCCCGGGCAACGTGGCC ACTGCGCGCACCGCGCGCCGCCATGGTGCTGTGGCAGGCGATTGCCCTGGCCGCGGTGCTGTCGTCGTTCAGCGCCGGAA TCGCGATCGCTAGCAGGCTGCTCATGCCCGGTCCCGACGGACGCCCTACGACCAGCTTCGTCGGCGCGGCCGGCCGCCTC GGCTGGCCGCTGTGGGCGGCCTACATCACCGTCTTTGCGTTGACTGTGCTGGTCGGTGCCCGGCTGGCGGTCGCCGTGGT GCGCGTCGCCACCGCCACGCGACGACGACGGGCACACCACCGCATGGTGGTCGATCTCGTCGGGGTCGGACACAATGGCG CGCTTGCCCAGCCGTGCGCGCGGGCCCGCGACCTTCGGGTCTTGGACGTCGCGCAGCCCCTTGCCTACTGTCTGCCCGGT GTGCGTAGCCGGGTTGTGGTCAGCGAAGGCACACTGACCGCGCTCGCCGACGCCGAGGTCGCGGCGATCCTTACCCATGA GCGGGCTCATCTACGCGCCCGCCACGATCTTGTCCTGGAGGCGTTTACCGCGGTGCACGCGGCTTTCCCGCGGTTGGTCC GCAGCGCCAATGCGCTGGGGGCGGCGCAGCTACTCGTCGAGCTCCTGGCCGATGACGCCGCGGTGCGCGCCGCCGGGCGC ACTCCCCTGGCTCGGGCATTGGTCGCCTGTGCGTCCGGGCGGGCGCCGTCGGGTGCGTTGGCCGTCGGAGGTCCCAGCAC GGTGCTCCGCGTGCGCCGGCTGTCGGGGCGTGGAAATAGCGCGGTTCTGTCCGCGGCCGCATATCTAGCTGCGGCCGCCG TCCTGGTGGTGCCCACCGTCGCGCTGGCCGTACCGTGGCTCACGCAGCTGCAGCGGCTGTTCATCGCCTAG
Upstream 100 bases:
>100_bases AGGCGGATGCGCTACGACGTGCGCTCGCCGAATTGGAAGCCGGTCATGGCAATCGGCCACCGGCTGGCGCGGCAACGGAG ACCTGAGGGAGACTAACGGC
Downstream 100 bases:
>100_bases CGAAGCCGGGCCCAACTGAAAGGCAGGACATGAGTTCGTCGGAATCGCCAGCCGGCATCGCGCAGATCGGCGTCACTGGC CTGGCCGTGATGGGTTCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein; Zn-Dependent Protease With Chaperone Function; Metallopeptidase; Peptidase M
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRLLMPGPDGRPTTSFVGAAGRL GWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHHRMVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPG VRSRVVVSEGTLTALADAEVAAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAAQLLVELLADDAAVRAAGR TPLARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTVALAVPWLTQLQRLFIA
Sequences:
>Translated_316_residues MSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRLLMPGPDGRPTTSFVGAAGRL GWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHHRMVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPG VRSRVVVSEGTLTALADAEVAAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAAQLLVELLADDAAVRAAGR TPLARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTVALAVPWLTQLQRLFIA >Mature_315_residues SALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRLLMPGPDGRPTTSFVGAAGRLG WPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHHRMVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGV RSRVVVSEGTLTALADAEVAAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAAQLLVELLADDAAVRAAGRT PLARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTVALAVPWLTQLQRLFIA
Specific function: Unknown
COG id: COG0501
COG function: function code O; Zn-dependent protease with chaperone function
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32709; Mature: 32578
Theoretical pI: Translated: 12.28; Mature: 12.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL CHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH HCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RMVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEV HHHHHHEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCEEHHHHHHH AAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAAQLLVELLADDAAVRAAGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCC TPLARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTV CHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH ALAVPWLTQLQRLFIA HHHHHHHHHHHHHHCC >Mature Secondary Structure SALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSSFSAGIAIASRL HHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVGARLAVAVVRVATATRRRRAHH HCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RMVVDLVGVGHNGALAQPCARARDLRVLDVAQPLAYCLPGVRSRVVVSEGTLTALADAEV HHHHHHEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCEEHHHHHHH AAILTHERAHLRARHDLVLEAFTAVHAAFPRLVRSANALGAAQLLVELLADDAAVRAAGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCC TPLARALVACASGRAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVVPTV CHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH ALAVPWLTQLQRLFIA HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA