| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is dhmA2
Identifier: 121637736
GI number: 121637736
Start: 2079884
End: 2080744
Strand: Reverse
Name: dhmA2
Synonym: BCG_1868c
Alternate gene names: 121637736
Gene position: 2080744-2079884 (Counterclockwise)
Preceding gene: 121637738
Following gene: 121637722
Centisome position: 47.57
GC content: 64.58
Gene sequence:
>861_bases ATGAGCATCGATTTCACGCCGGATCCGCAGCTGTACCCGTTCGAGTCGCGCTGGTTCGACAGCTCGCGTGGACGCATCCA CTACGTCGACGAGGGCACGGGTCCGCCGATCCTGTTGTGTCACGGCAACCCGACGTGGAGTTTCCTGTATCGGGACATCA TCGTCGCACTGCGGGACCGTTTCCGTTGTGTGGCTCCGGATTATCTGGGTTTCGGGTTATCGGAGCGTCCCTCGGGATTC GGGTACCAGATCGACGAGCACGCGCGGGTGATCGGCGAATTCGTCGATCACCTGGGCCTGGACCGCTACCTGAGCATGGG TCAGGACTGGGGTGGCCCGATCAGCATGGCGGTCGCTGTCGAGCGTGCCGACCGGGTCCGCGGCGTCGTGTTGGGCAACA CGTGGTTCTGGCCGGCGGACACGCTGGCGATGAAGGCCTTCAGCAGGGTGATGTCCAGCCCGCCAGTGCAGTACGCGATC TTACGGCGCAACTTCTTTGTCGAGCGCTTGATACCCGCGGGAACCGAGCACCGGCCGAGTAGCGCGGTGATGGCGCACTA CCGGGCGGTGCAGCCCAACGCCGCGGCACGCCGAGGCGTAGCCGAGATGCCCAAACAGATCCTGGCCGCCCGTCCCCTGC TGGCACGGCTCGCCCGGGAGGTGCCAGCCACGCTGGGCACCAAGCCCACCCTGTTGATTTGGGGGATGAAGGATGTCGCA TTCAGGCCGAAAACGATTATCCCCAGACTGAGTGCGACATTTCCCGACCACGTCCTGGTGGAGCTGCCCAACGCCAAACA CTTCATCCAGGAGGACGCCCCCGACCGGATCGCCGCCGCGATCATTGAGCGCTTCGGCTGA
Upstream 100 bases:
>100_bases GACAGCCGTCGGCAGCCAGCGGCCACCGTCACGCCACTCCCGGACACTCGGTGATGTCACCCTTCGGGCATACCATCATG AGCGCGATCGGAGGAGGGTA
Downstream 100 bases:
>100_bases ACCTTTGTCGCTGAGCACCCCGCAACAGCTGGCATTGTTGGAGCGCGGGTGGCGACACCGAATAGCTCCCCACCCCACCT CCGACCACGGTCAACCCCGC
Product: haloalkane dehalogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MSIDFTPDPQLYPFESRWFDSSRGRIHYVDEGTGPPILLCHGNPTWSFLYRDIIVALRDRFRCVAPDYLGFGLSERPSGF GYQIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAI LRRNFFVERLIPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLIWGMKDVA FRPKTIIPRLSATFPDHVLVELPNAKHFIQEDAPDRIAAAIIERFG
Sequences:
>Translated_286_residues MSIDFTPDPQLYPFESRWFDSSRGRIHYVDEGTGPPILLCHGNPTWSFLYRDIIVALRDRFRCVAPDYLGFGLSERPSGF GYQIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAI LRRNFFVERLIPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLIWGMKDVA FRPKTIIPRLSATFPDHVLVELPNAKHFIQEDAPDRIAAAIIERFG >Mature_285_residues SIDFTPDPQLYPFESRWFDSSRGRIHYVDEGTGPPILLCHGNPTWSFLYRDIIVALRDRFRCVAPDYLGFGLSERPSGFG YQIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAIL RRNFFVERLIPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLIWGMKDVAF RPKTIIPRLSATFPDHVLVELPNAKHFIQEDAPDRIAAAIIERFG
Specific function: Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the haloalkane dehalogenase family. Type 1 subfamily
Homologues:
Organism=Homo sapiens, GI27597073, Length=203, Percent_Identity=29.5566502463054, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17554012, Length=288, Percent_Identity=23.2638888888889, Blast_Score=85, Evalue=4e-17, Organism=Saccharomyces cerevisiae, GI6324392, Length=282, Percent_Identity=24.822695035461, Blast_Score=75, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DHMA2_MYCBO (P64304)
Other databases:
- EMBL: BX248340 - RefSeq: NP_855516.1 - ProteinModelPortal: P64304 - SMR: P64304 - EnsemblBacteria: EBMYCT00000017005 - GeneID: 1092984 - GenomeReviews: BX248333_GR - KEGG: mbo:Mb1864c - GeneTree: EBGT00050000015214 - HOGENOM: HBG748003 - OMA: SSAVMEH - ProtClustDB: PRK03204 - BioCyc: MBOV233413:MB1864C-MONOMER - BRENDA: 3.8.1.5 - HAMAP: MF_01230 - InterPro: IPR000073 - InterPro: IPR000639 - PRINTS: PR00111 - PRINTS: PR00412
Pfam domain/function: PF00561 Abhydrolase_1
EC number: =3.8.1.5
Molecular weight: Translated: 32151; Mature: 32020
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: ACT_SITE 109-109 ACT_SITE 238-238 ACT_SITE 267-267
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIDFTPDPQLYPFESRWFDSSRGRIHYVDEGTGPPILLCHGNPTWSFLYRDIIVALRDR CCCCCCCCCCCCCCHHHCCCCCCCEEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHH FRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAV CEECCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCHHHHHH ERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAILRRNFFVERLIPAGTEHRPS HHHHHHCEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCC SAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLIWGMKDVA HHHHHHHHHCCCCHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEECCHHHC FRPKTIIPRLSATFPDHVLVELPNAKHFIQEDAPDRIAAAIIERFG CCCHHHCCCCCCCCCCCEEEECCCCHHHHHCCCHHHHHHHHHHHCC >Mature Secondary Structure SIDFTPDPQLYPFESRWFDSSRGRIHYVDEGTGPPILLCHGNPTWSFLYRDIIVALRDR CCCCCCCCCCCCCHHHCCCCCCCEEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHH FRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAV CEECCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCHHHHHH ERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAILRRNFFVERLIPAGTEHRPS HHHHHHCEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCC SAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLIWGMKDVA HHHHHHHHHCCCCHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEECCHHHC FRPKTIIPRLSATFPDHVLVELPNAKHFIQEDAPDRIAAAIIERFG CCCHHHCCCCCCCCCCCEEEECCCCHHHHHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972