| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121637641
Identifier: 121637641
GI number: 121637641
Start: 1965014
End: 1965646
Strand: Reverse
Name: 121637641
Synonym: BCG_1772c
Alternate gene names: NA
Gene position: 1965646-1965014 (Counterclockwise)
Preceding gene: 121637642
Following gene: 121637640
Centisome position: 44.93
GC content: 66.03
Gene sequence:
>633_bases ATGATCGCCACAACCCGCGATCGTGAAGGAGCCACCATGATCACGTTTAGGCTGCGCTTGCCGTGCCGGACGATACTGCG GGTGTTCAGCCGCAATCCGCTGGTGCGTGGGACGGATCGACTCGAGGCGGTCGTCATGCTGCTGGCCGTCACGGTCTCGC TGCTGACTATCCCGTTCGCCGCCGCGGCCGGCACCGCAGTCCATGATTCCCGCAGCCACGTCTATGCCCACCAGGCCCAG ACCCGCCATCCCGCAACCGCGACCGTGATCGATCACGAGGGGGTGATCGACAGCAACACGACCGCCACGTCAGCGCCGCC GCGCACGAAGATCACCGTGCCTGCCCGATGGGTCGTGAACGGAATAGAACGCAGCGGTGAGGTCAACGCGAAGCCGGGAA CCAAATCCGGTGACCGCGTCGGCATTTGGGTCGACAGTGCCGGTCAGCTGGTCGATGAACCAGCTCCGCCGGCCCGTGCC ATTGCGGATGCGGCCCTGGCCGCCTTGGGACTCTGGTTGAGCGTCGCCGCGGTTGCGGGCGCCCTGCTGGCGCTCACTCG GGCGATTCTGATCCGCGTTCGCAACGCCAGTTGGCAACACGACATCGACAGCCTGTTCTGCACGCAGCGGTGA
Upstream 100 bases:
>100_bases ACGCCCGGTTCACCCGATATGCACGGCGCCCAGCCATTCGTGACCGACGTCCCCAGCCCCAAGGCCGAACGACCCTAGGA GCCACGAGCAATTCACAGCG
Downstream 100 bases:
>100_bases CAACCGTCCGGTAGCGGCAACCAGGGCTCCGCCAAGCTGGACCGCGACCGTACTCTGGACGGCATGGCCGTTGAATCCAG CATGCTCGCCCTCGGCACCC
Product: putative transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MIATTRDREGATMITFRLRLPCRTILRVFSRNPLVRGTDRLEAVVMLLAVTVSLLTIPFAAAAGTAVHDSRSHVYAHQAQ TRHPATATVIDHEGVIDSNTTATSAPPRTKITVPARWVVNGIERSGEVNAKPGTKSGDRVGIWVDSAGQLVDEPAPPARA IADAALAALGLWLSVAAVAGALLALTRAILIRVRNASWQHDIDSLFCTQR
Sequences:
>Translated_210_residues MIATTRDREGATMITFRLRLPCRTILRVFSRNPLVRGTDRLEAVVMLLAVTVSLLTIPFAAAAGTAVHDSRSHVYAHQAQ TRHPATATVIDHEGVIDSNTTATSAPPRTKITVPARWVVNGIERSGEVNAKPGTKSGDRVGIWVDSAGQLVDEPAPPARA IADAALAALGLWLSVAAVAGALLALTRAILIRVRNASWQHDIDSLFCTQR >Mature_210_residues MIATTRDREGATMITFRLRLPCRTILRVFSRNPLVRGTDRLEAVVMLLAVTVSLLTIPFAAAAGTAVHDSRSHVYAHQAQ TRHPATATVIDHEGVIDSNTTATSAPPRTKITVPARWVVNGIERSGEVNAKPGTKSGDRVGIWVDSAGQLVDEPAPPARA IADAALAALGLWLSVAAVAGALLALTRAILIRVRNASWQHDIDSLFCTQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22467; Mature: 22467
Theoretical pI: Translated: 10.90; Mature: 10.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIATTRDREGATMITFRLRLPCRTILRVFSRNPLVRGTDRLEAVVMLLAVTVSLLTIPFA CCCCCCCCCCCEEEEEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AAAGTAVHDSRSHVYAHQAQTRHPATATVIDHEGVIDSNTTATSAPPRTKITVPARWVVN HHCCCCCCCCCCCEEHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEECHHHHHH GIERSGEVNAKPGTKSGDRVGIWVDSAGQLVDEPAPPARAIADAALAALGLWLSVAAVAG HHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ALLALTRAILIRVRNASWQHDIDSLFCTQR HHHHHHHHHHHHHCCCCCCHHHHHHHHCCC >Mature Secondary Structure MIATTRDREGATMITFRLRLPCRTILRVFSRNPLVRGTDRLEAVVMLLAVTVSLLTIPFA CCCCCCCCCCCEEEEEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AAAGTAVHDSRSHVYAHQAQTRHPATATVIDHEGVIDSNTTATSAPPRTKITVPARWVVN HHCCCCCCCCCCCEEHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEECHHHHHH GIERSGEVNAKPGTKSGDRVGIWVDSAGQLVDEPAPPARAIADAALAALGLWLSVAAVAG HHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ALLALTRAILIRVRNASWQHDIDSLFCTQR HHHHHHHHHHHHHCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]