| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is uidR [C]
Identifier: 121637592
GI number: 121637592
Start: 1915994
End: 1916617
Strand: Reverse
Name: uidR [C]
Synonym: BCG_1723c
Alternate gene names: 121637592
Gene position: 1916617-1915994 (Counterclockwise)
Preceding gene: 121637593
Following gene: 121637582
Centisome position: 43.81
GC content: 62.82
Gene sequence:
>624_bases GTGGCGGCGCCGGACAACAGCCGCAGACGGCCCGGGCGACCCGCCGGCAGCTCTGACACTAGGGAGCGAATCCTGTCCAG TGCCCGAGAACTCTTTGCGCACAACGGCATTGACAGAACATCGATCCGAGCCGTGGCCGCCAAGGCCGGTGTTGATGCCG CACTAGTGCATCACTACTTCGGCACCAAACAGCAGCTTTTCGCCGCCGCGATCCACATTCCGATCGACCCGATGGTCATC ATCGGTCCGATTCGCGAGGCGCCTGTCGAGGAACTCGGTTACAAGCTGCCGTCCTTGTTGCTGCCGATTTGGGATTCCGA ACTGGGTGCCGGGTTGATCGCGACGCTGAGATCCTTGATCTCAGGCTCCGACGTGGGCCTGGCGCGCTCCTTCCTTGAGG AAGTGGTCACCGTGGAGCTTGGGTCCCGCGTCGACAACCCGCCGGGAACCGGCAAGATCCGTACCCAGTTCGTCGCGTCG CAACTGATGGGTGTGGTCATGGCGCGCTACATCGTCAGAATCGAACCGTTTGCTTCGTTGCCGGCCGAACAGATCGTGCA AACCATCGCGCCCAACCTGCAGCGCTACCTCACTGGGGAGCTGCCGGACGACCTCGCGCCATGA
Upstream 100 bases:
>100_bases CTGACCGGTATCGCGGTGCGCGACGTCGTCGTCGTGCTGAGTTTCGCGGTCGCGTCGCTGTGTCTGGCGGCGGTGACACT GCGGCGACGGACGTCATAGC
Downstream 100 bases:
>100_bases GGCGGGCGTGCTCGTCCTCGTCGACCTCGCGGGCCTCGTCGACCAGCAGAACCGGGATACCGTCCTCGATGCGGTAGGCG CGCCGCAGCCGCGGGTTATA
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; Regulatory Protein TetR; TetR-Family Transcriptional Regulator; Regulatory Protein; TetR-Family Protein Transcriptional Regulator; HTH-Type Transcriptional Regulator; TetR-Family Regulator; Tetr Family Transcriptional Regulator
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MAAPDNSRRRPGRPAGSSDTRERILSSARELFAHNGIDRTSIRAVAAKAGVDAALVHHYFGTKQQLFAAAIHIPIDPMVI IGPIREAPVEELGYKLPSLLLPIWDSELGAGLIATLRSLISGSDVGLARSFLEEVVTVELGSRVDNPPGTGKIRTQFVAS QLMGVVMARYIVRIEPFASLPAEQIVQTIAPNLQRYLTGELPDDLAP
Sequences:
>Translated_207_residues MAAPDNSRRRPGRPAGSSDTRERILSSARELFAHNGIDRTSIRAVAAKAGVDAALVHHYFGTKQQLFAAAIHIPIDPMVI IGPIREAPVEELGYKLPSLLLPIWDSELGAGLIATLRSLISGSDVGLARSFLEEVVTVELGSRVDNPPGTGKIRTQFVAS QLMGVVMARYIVRIEPFASLPAEQIVQTIAPNLQRYLTGELPDDLAP >Mature_206_residues AAPDNSRRRPGRPAGSSDTRERILSSARELFAHNGIDRTSIRAVAAKAGVDAALVHHYFGTKQQLFAAAIHIPIDPMVII GPIREAPVEELGYKLPSLLLPIWDSELGAGLIATLRSLISGSDVGLARSFLEEVVTVELGSRVDNPPGTGKIRTQFVASQ LMGVVMARYIVRIEPFASLPAEQIVQTIAPNLQRYLTGELPDDLAP
Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22324; Mature: 22193
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPDNSRRRPGRPAGSSDTRERILSSARELFAHNGIDRTSIRAVAAKAGVDAALVHHYF CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHH GTKQQLFAAAIHIPIDPMVIIGPIREAPVEELGYKLPSLLLPIWDSELGAGLIATLRSLI CCHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH SGSDVGLARSFLEEVVTVELGSRVDNPPGTGKIRTQFVASQLMGVVMARYIVRIEPFASL CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCC PAEQIVQTIAPNLQRYLTGELPDDLAP CHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure AAPDNSRRRPGRPAGSSDTRERILSSARELFAHNGIDRTSIRAVAAKAGVDAALVHHYF CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHH GTKQQLFAAAIHIPIDPMVIIGPIREAPVEELGYKLPSLLLPIWDSELGAGLIATLRSLI CCHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH SGSDVGLARSFLEEVVTVELGSRVDNPPGTGKIRTQFVASQLMGVVMARYIVRIEPFASL CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCC PAEQIVQTIAPNLQRYLTGELPDDLAP CHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA