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The map label for this gene is 121637495

Identifier: 121637495

GI number: 121637495

Start: 1794415

End: 1795083

Strand: Reverse

Name: 121637495

Synonym: BCG_1626c

Alternate gene names: NA

Gene position: 1795083-1794415 (Counterclockwise)

Preceding gene: 121637499

Following gene: 121637494

Centisome position: 41.03

GC content: 65.92

Gene sequence:

>669_bases
ATGTTAGCGAATAGCCGGGAGGAGCTTGTCGAGGTCTTTGATGCGCTGGATGCCGAGCTGGACCGCTTGGACGAGGTGTC
TTTTGAGGTGTTGACCACCCCGGAACGGCTGCGGTCTCTGGAACGTCTGGAATGCTTGGTGCGCCGGCTACCGGCGGTCG
GGCACACGTTGATCAACCAACTCGACACCCAAGCCAGCGAGGAAGAACTGGGCGGCACGCTGTGCTGCGCGCTGGCCAAC
CGGTTACGCATCACCAAGCCCGACGCCGCCCTACGCATCGCCGACGCCGCCGATCTCGGACCTCGTCGAGCACTCACCGG
CGAACCGCTAGCCCCACAGTTGACCGCCACCGCCACCGCCCAACGCCAGGGCCTGATCGGCGAGGCGCACATCAAAGTGA
TTCGCGCCCTTTTTCGCCCACCTGCCCGCCGCGGTGGATGTGTCCACCCGCCAGGCCGCCGAAGCCGACCTGGCCGGCAA
AGCCGCTCAATATCGTCCCGACGAGCTGGCCCGCTACGCCCAGCGGGTCATGGACTGGCTACACCCCGACGGCGACCTCA
CCGACACCGAACGCGCCCGCAAACGCGGCATCACCCTGAGCAACCAGCAATACGACGGCATGTCACGGCTAAGTGGCTAC
CTGACCCCCCAAGCGCGGGCCACCTTTGA

Upstream 100 bases:

>100_bases
GCTCGCGAGGGCTCTCGAGTCACTGAATTCACTTAGCTAACACCAGTTCTAGCAGCTGTCGGCGCGACTTCTTGTCAGTG
CCCGACGTTATGATTCGAAC

Downstream 100 bases:

>100_bases
AGCCGTGCTAGCCAAACTGGCCGCCCCCGGCGCGACCAACCCCGACGACCACACCCCGGTCATCGACACCACCCCCGATG
CGGCCGCCATCGACCGCGAC

Product: REP13E12 repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MLANSREELVEVFDALDAELDRLDEVSFEVLTTPERLRSLERLECLVRRLPAVGHTLINQLDTQASEEELGGTLCCALAN
RLRITKPDAALRIADAADLGPRRALTGEPLAPQLTATATAQRQGLIGEAHIKVIRALFRPPARRGGCVHPPGRRSRPGRQ
SRSISSRRAGPLRPAGHGLATPRRRPHRHRTRPQTRHHPEQPAIRRHVTAKWLPDPPSAGHL

Sequences:

>Translated_222_residues
MLANSREELVEVFDALDAELDRLDEVSFEVLTTPERLRSLERLECLVRRLPAVGHTLINQLDTQASEEELGGTLCCALAN
RLRITKPDAALRIADAADLGPRRALTGEPLAPQLTATATAQRQGLIGEAHIKVIRALFRPPARRGGCVHPPGRRSRPGRQ
SRSISSRRAGPLRPAGHGLATPRRRPHRHRTRPQTRHHPEQPAIRRHVTAKWLPDPPSAGHL
>Mature_222_residues
MLANSREELVEVFDALDAELDRLDEVSFEVLTTPERLRSLERLECLVRRLPAVGHTLINQLDTQASEEELGGTLCCALAN
RLRITKPDAALRIADAADLGPRRALTGEPLAPQLTATATAQRQGLIGEAHIKVIRALFRPPARRGGCVHPPGRRSRPGRQ
SRSISSRRAGPLRPAGHGLATPRRRPHRHRTRPQTRHHPEQPAIRRHVTAKWLPDPPSAGHL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Rv1128c/1148c/1588c/1702c/1945/3466 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1588_MYCTU (P0A5F1)

Other databases:

- EMBL:   BX842577
- EMBL:   AE000516
- PIR:   F70542
- RefSeq:   NP_216104.1
- RefSeq:   NP_336077.1
- EnsemblBacteria:   EBMYCT00000003765
- EnsemblBacteria:   EBMYCT00000069052
- GeneID:   886325
- GeneID:   924307
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT1623
- KEGG:   mtu:Rv1588c
- TIGR:   MT1623
- TubercuList:   Rv1588c
- GeneTree:   EBGT00050000015359
- HOGENOM:   HBG570992
- ProtClustDB:   CLSK791268

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24592; Mature: 24592

Theoretical pI: Translated: 11.77; Mature: 11.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLANSREELVEVFDALDAELDRLDEVSFEVLTTPERLRSLERLECLVRRLPAVGHTLINQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH
LDTQASEEELGGTLCCALANRLRITKPDAALRIADAADLGPRRALTGEPLAPQLTATATA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEECCHHCCCCCCCCCCCCCCCCHHHHHHH
QRQGLIGEAHIKVIRALFRPPARRGGCVHPPGRRSRPGRQSRSISSRRAGPLRPAGHGLA
HHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
TPRRRPHRHRTRPQTRHHPEQPAIRRHVTAKWLPDPPSAGHL
CCCCCCHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLANSREELVEVFDALDAELDRLDEVSFEVLTTPERLRSLERLECLVRRLPAVGHTLINQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH
LDTQASEEELGGTLCCALANRLRITKPDAALRIADAADLGPRRALTGEPLAPQLTATATA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEECCHHCCCCCCCCCCCCCCCCHHHHHHH
QRQGLIGEAHIKVIRALFRPPARRGGCVHPPGRRSRPGRQSRSISSRRAGPLRPAGHGLA
HHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
TPRRRPHRHRTRPQTRHHPEQPAIRRHVTAKWLPDPPSAGHL
CCCCCCHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036