| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is papA4
Identifier: 121637449
GI number: 121637449
Start: 1741294
End: 1741791
Strand: Reverse
Name: papA4
Synonym: BCG_1580c
Alternate gene names: NA
Gene position: 1741791-1741294 (Counterclockwise)
Preceding gene: 121637453
Following gene: 121637448
Centisome position: 39.82
GC content: 63.45
Gene sequence:
>498_bases GTGACTCAGCTTCCACAACCAACCTGGCGCTGGTGGCAGCAAAGAGAGACGGAGCAGGTGCAGTCCAGCCACATCGACGG AGAAATAGTCGGCGCGTTGATCCCTGACCTGGCGGTGCTGCACAGCGAGGATGCCTCACGCGCGGCCGTGGGAAGGGAAA AGCATAGATGCTCGTTGGATCCTCTAGGTGGCGGCTTCCGTTCCCGTCGTGCCTCGATGCCGGCCGGCGCGCTTCTGCTG TCTGCGGTCATCGCAATACAACTGGACCGGATGAATGCCAGAGTATTCGGCGATGGCTGGATCGGCGCGCAAGCGTGCAT GTGGGTCAACAAGTTTCACGAGGAGAGCACCGTCACCGCGTTGTCCCCCAGTAGTCCGATCGCGCAGGGCTCGATCGCGC GGCATCCAGAGACGATGCAATCGGCGTACGTGCGCATCGCCGAGGGCGGATCGCGCGATGTCGCCCCAGCCGCCCAGCTT CAGCGACGACGGCCTTGA
Upstream 100 bases:
>100_bases GCACACTGGCGCGCTCGCGCAGCGCGGTGGGAATCGAAGACGCGACCACGGCAGCACACTACCTCTAACGCTTCGTCAAC GCTGACGGTTTCGCCCGACG
Downstream 100 bases:
>100_bases TCCGTCCAGTGAAACCTGCACGTAACATTTTCGATTTCGGGGATTTCCGGGCACCAATTGGCATAACCTGAACATCGGAG TTCGGGTTGCCTTCGACACT
Product: putative polyketide synthase associated protein papA4
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MTQLPQPTWRWWQQRETEQVQSSHIDGEIVGALIPDLAVLHSEDASRAAVGREKHRCSLDPLGGGFRSRRASMPAGALLL SAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIAEGGSRDVAPAAQL QRRRP
Sequences:
>Translated_165_residues MTQLPQPTWRWWQQRETEQVQSSHIDGEIVGALIPDLAVLHSEDASRAAVGREKHRCSLDPLGGGFRSRRASMPAGALLL SAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIAEGGSRDVAPAAQL QRRRP >Mature_164_residues TQLPQPTWRWWQQRETEQVQSSHIDGEIVGALIPDLAVLHSEDASRAAVGREKHRCSLDPLGGGFRSRRASMPAGALLLS AVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTALSPSSPIAQGSIARHPETMQSAYVRIAEGGSRDVAPAAQLQ RRRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18077; Mature: 17945
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQLPQPTWRWWQQRETEQVQSSHIDGEIVGALIPDLAVLHSEDASRAAVGREKHRCSLD CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHCCHHCCCCCC PLGGGFRSRRASMPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTA CCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHCCCEEEE LSPSSPIAQGSIARHPETMQSAYVRIAEGGSRDVAPAAQLQRRRP ECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCC >Mature Secondary Structure TQLPQPTWRWWQQRETEQVQSSHIDGEIVGALIPDLAVLHSEDASRAAVGREKHRCSLD CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHCCHHCCCCCC PLGGGFRSRRASMPAGALLLSAVIAIQLDRMNARVFGDGWIGAQACMWVNKFHEESTVTA CCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHCCCEEEE LSPSSPIAQGSIARHPETMQSAYVRIAEGGSRDVAPAAQLQRRRP ECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA