| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is devB
Identifier: 121637375
GI number: 121637375
Start: 1648526
End: 1649269
Strand: Reverse
Name: devB
Synonym: BCG_1506c
Alternate gene names: 121637375
Gene position: 1649269-1648526 (Counterclockwise)
Preceding gene: 121637376
Following gene: 121637374
Centisome position: 37.7
GC content: 67.88
Gene sequence:
>744_bases GTGAGCAGTAGCATCGAGATCTTCCCCGATAGCGACATTCTGGTCGCGGCCGCGGGTAAGCGCTTGGTTGGCGCCATCGG GGCCGCGGTGGCGGCCAGAGGGCAGGCGCTGATCGTGCTGACCGGGGGCGGCAACGGGATTGCGCTTCTGCGCTACCTCA GCGCCCAAGCACAGCAGATTGAATGGTCCAAGGTGCACCTGTTCTGGGGCGACGAACGCTACGTTCCCGAAGACGATGAC GAGCGCAATCTCAAGCAGGCCCGGCGGGCGTTGCTCAATCACGTCGACATTCCATCGAACCAGGTGCACCCGATGGCCGC CAGTGATGGTGACTTCGGCGGCGATCTGGACGCCGCGGCCCTGGCCTACGAACAGGTGCTGGCCGCCAGTGCCGCACCAG GTGACCCGGCGCCGAATTTCGACGTCCACCTGCTGGGCATGGGGCCCGAGGGCCACATTAACTCGCTGTTCCCGCACAGC CCCGCCGTCCTCGAGAGCACCCGCATGGTGGTGGCGGTCGACGACTCGCCGAAACCGCCGCCACGCCGAATCACCTTGAC CCTGCCGGCGATTCAGCGTTCCCGCGAGGTGTGGCTGCTGGTTTCCGGGCCGGGTAAGGCCGACGCCGTGGCCGCGGCCA TCGGCGGCGCCGATCCGGTTTCGGTACCGGCGGCCGGGGCCGTCGGGCGTCAGAACACGCTCTGGCTGCTGGACCGCGAC GCCGCCGCCAAGCTTCCGAGTTAA
Upstream 100 bases:
>100_bases GCAGGGTAACCGGTGAGTGCCTAGCCGAAGACCTGCGCCGGCTGGACCCCGACGAAATCTACTGCGCCGCGCTCGAGGGA ATCAAGAAGGTGCAGTACCG
Downstream 100 bases:
>100_bases CCGCGTCAGGGTCATAATGACCGTCATGGCAGACAGAAGCGGCCGCCCCGCGCCCGTGCGACGGCGAATGAAAACCCTCA CCCAGGCCGCATTGAACGCC
Product: putative 6-phosphogluconolactonase devB
Products: NA
Alternate protein names: 6PGL
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MSSSIEIFPDSDILVAAAGKRLVGAIGAAVAARGQALIVLTGGGNGIALLRYLSAQAQQIEWSKVHLFWGDERYVPEDDD ERNLKQARRALLNHVDIPSNQVHPMAASDGDFGGDLDAAALAYEQVLAASAAPGDPAPNFDVHLLGMGPEGHINSLFPHS PAVLESTRMVVAVDDSPKPPPRRITLTLPAIQRSREVWLLVSGPGKADAVAAAIGGADPVSVPAAGAVGRQNTLWLLDRD AAAKLPS
Sequences:
>Translated_247_residues MSSSIEIFPDSDILVAAAGKRLVGAIGAAVAARGQALIVLTGGGNGIALLRYLSAQAQQIEWSKVHLFWGDERYVPEDDD ERNLKQARRALLNHVDIPSNQVHPMAASDGDFGGDLDAAALAYEQVLAASAAPGDPAPNFDVHLLGMGPEGHINSLFPHS PAVLESTRMVVAVDDSPKPPPRRITLTLPAIQRSREVWLLVSGPGKADAVAAAIGGADPVSVPAAGAVGRQNTLWLLDRD AAAKLPS >Mature_246_residues SSSIEIFPDSDILVAAAGKRLVGAIGAAVAARGQALIVLTGGGNGIALLRYLSAQAQQIEWSKVHLFWGDERYVPEDDDE RNLKQARRALLNHVDIPSNQVHPMAASDGDFGGDLDAAALAYEQVLAASAAPGDPAPNFDVHLLGMGPEGHINSLFPHSP AVLESTRMVVAVDDSPKPPPRRITLTLPAIQRSREVWLLVSGPGKADAVAAAIGGADPVSVPAAGAVGRQNTLWLLDRDA AAKLPS
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily
Homologues:
Organism=Homo sapiens, GI52145310, Length=234, Percent_Identity=33.7606837606838, Blast_Score=116, Evalue=2e-26, Organism=Homo sapiens, GI6912586, Length=252, Percent_Identity=32.9365079365079, Blast_Score=104, Evalue=8e-23, Organism=Caenorhabditis elegans, GI115533058, Length=249, Percent_Identity=30.1204819277108, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI115533060, Length=249, Percent_Identity=30.1204819277108, Blast_Score=86, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6324362, Length=205, Percent_Identity=32.1951219512195, Blast_Score=97, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6319918, Length=206, Percent_Identity=32.5242718446602, Blast_Score=93, Evalue=4e-20, Organism=Saccharomyces cerevisiae, GI6321957, Length=253, Percent_Identity=26.8774703557312, Blast_Score=92, Evalue=7e-20, Organism=Saccharomyces cerevisiae, GI6321687, Length=259, Percent_Identity=28.957528957529, Blast_Score=86, Evalue=4e-18, Organism=Drosophila melanogaster, GI24641119, Length=213, Percent_Identity=36.150234741784, Blast_Score=106, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): 6PGL_MYCBO (P63339)
Other databases:
- EMBL: BX248339 - RefSeq: NP_855132.1 - ProteinModelPortal: P63339 - SMR: P63339 - EnsemblBacteria: EBMYCT00000017677 - GeneID: 1092337 - GenomeReviews: BX248333_GR - KEGG: mbo:Mb1480c - GeneTree: EBGT00050000017647 - HOGENOM: HBG725991 - OMA: PAICLTG - ProtClustDB: CLSK791167 - BioCyc: MBOV233413:MB1480C-MONOMER - BRENDA: 3.1.1.31 - InterPro: IPR005900 - InterPro: IPR006148 - PANTHER: PTHR11054 - TIGRFAMs: TIGR01198
Pfam domain/function: PF01182 Glucosamine_iso
EC number: =3.1.1.31
Molecular weight: Translated: 25804; Mature: 25673
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSIEIFPDSDILVAAAGKRLVGAIGAAVAARGQALIVLTGGGNGIALLRYLSAQAQQI CCCCEEEECCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCC EWSKVHLFWGDERYVPEDDDERNLKQARRALLNHVDIPSNQVHPMAASDGDFGGDLDAAA EEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCHHHHH LAYEQVLAASAAPGDPAPNFDVHLLGMGPEGHINSLFPHSPAVLESTRMVVAVDDSPKPP HHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEECCCEEEEEECCCCCCC PRRITLTLPAIQRSREVWLLVSGPGKADAVAAAIGGADPVSVPAAGAVGRQNTLWLLDRD CCEEEEEECCCCCCCEEEEEEECCCCCHHEEEECCCCCCCCCCCCCCCCCCCEEEEEECC AAAKLPS HHCCCCC >Mature Secondary Structure SSSIEIFPDSDILVAAAGKRLVGAIGAAVAARGQALIVLTGGGNGIALLRYLSAQAQQI CCCEEEECCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCC EWSKVHLFWGDERYVPEDDDERNLKQARRALLNHVDIPSNQVHPMAASDGDFGGDLDAAA EEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCHHHHH LAYEQVLAASAAPGDPAPNFDVHLLGMGPEGHINSLFPHSPAVLESTRMVVAVDDSPKPP HHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEECCCEEEEEECCCCCCC PRRITLTLPAIQRSREVWLLVSGPGKADAVAAAIGGADPVSVPAAGAVGRQNTLWLLDRD CCEEEEEECCCCCCCEEEEEEECCCCCHHEEEECCCCCCCCCCCCCCCCCCCEEEEEECC AAAKLPS HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972