| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is yebQ [C]
Identifier: 121637340
GI number: 121637340
Start: 1610998
End: 1612554
Strand: Reverse
Name: yebQ [C]
Synonym: BCG_1471c
Alternate gene names: 121637340
Gene position: 1612554-1610998 (Counterclockwise)
Preceding gene: 121637341
Following gene: 121637335
Centisome position: 36.86
GC content: 65.57
Gene sequence:
>1557_bases ATGCGAGCAGGACGTCGAGTCGCGATTAGCGCGGGCAGCCTGGCAGTACTGCTGGGCGCCCTGGACACCTATGTCGTGGT CACCATCATGCGCGACATCATGAACAGCGTTGGTATACCGATCAACCAACTCCACCGGATCACCTGGATCGTCACGATGT ACCTCCTGGGCTACATCGCCGCCATGCCGTTGCTGGGCCGGGCTTCCGACCGATTCGGGCGCAAGCTGATGCTGCAGGTC AGCCTGGCCGGGTTCATCATCGGCTCGGTAGTGACCGCGCTGGCCGGGCATTTTGGCGATTTCCACATGCTGATCGCGGG CCGCACGATCCAGGGTGTTGCCAGCGGCGCGCTATTGCCGATCACGCTGGCGCTGGGCGCCGATTTGTGGTCGCAGCGCA ACCGCGCCGGCGTGCTCGGCGGTATCGGCGCCGCGCAGGAGCTCGGCAGCGTTCTGGGCCCGTTGTACGGAATCTTCATC GTTTGGCTATTGCACGACTGGCGTGACGTGTTCTGGATCAACGTCCCGTTGACCGCGATCGCCATGGTAATGATCCACTT CAGCCTGCCCTCACACGACCGCAGCACGGAGCCCGAGCGAGTCGACCTGGTCGGTGGTCTGCTGCTGGCACTCGCGTTGG GCCTCGCCGTCATCGGGCTGTACAACCCCAATCCCGACGGCAAACACGTACTGCCGGACTACGGGGCTCCGTTGCTGGTC GGCGCTCTCGTTGCCGCGGTGGCGTTCTTCGGTTGGGAACGTTTCGCTCGCACCCGGCTGATCGACCCGGCCGGTGTGCA CTTCCGGCCGTTCCTGTCCGCGCTGGGTGCCTCCGTCGCCGCCGGCGCGGCGCTGATGGTGACGCTGGTTGATGTCGAGC TGTTCGGCCAGGGCGTGCTGCAGATGGACCAGGCTCAGGCGGCCGGAATGCTGCTGTGGTTCCTTATCGCCCTACCGATC GGGGCAGTGACGGGCGGGTGGATCGCCACCAGGGCCGGTGACCGTGCGGTGGCCTTTGCCGGACTGCTTATTGCGGCGTA CGGTTACTGGCTTATTTCCCACTGGCCGGTGGACCTGTTGGCCGATCGGCACAACATCCTCGGATTGTTCACCGTGCCGG CGATGCACACCGACCTGGTGGTGGCTGGTTTAGGGTTGGGGCTGGTGATCGGGCCGCTATCGTCGGCCACCCTACGGGTT GTCCCGTCGGCCCAGCACGGCATCGCTTCGGCGGCGGTGGTGGTCGCCCGGATGACCGGCATGTTGATCGGCGTGGCCGC GCTGAGCGCCTGGGGGTTGTACCGGTTCAACCAGATCCTGGCGGGGTTGTCGGCGGCCATCCCGCCCAACGCCAGCCTGC TCGAGCGCGCGGCCGCAATTGGAGCCCGGTACCAGCAGGCGTTCGCGCTGATGTACGGCGAGATATTCACCATCACCGCG ATCGTGTGCGTGTTCGGCGCGGTGCTAGGTCTGTTGATCAGCGGCCGCAAGGAACATGCCGATGAACCGGAAGTCCAGGA GCAACCGACCCTGGCGCCCCAAGTGGAGCCGCTCTAA
Upstream 100 bases:
>100_bases AGGCCCAGTTGGACCGCGGCTCGGGCAATTCCGTCCAGATGACCTTGTCGAAATGGGGCGAGAAGGTCCAGGTCACGAAG CCCCCGGTGAGCTGATCAGC
Downstream 100 bases:
>100_bases CGAGCCACCAAGCTCAGCAACAGATCCGGTCCGACCTTTTCGACGCTGTCGAACTGCCAACGCAACGCGTTGGTGATGTT GGACACCCCGACGTCATCGA
Product: aminoglycosides/tetracycline-transport integral membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 518; Mature: 518
Protein sequence:
>518_residues MRAGRRVAISAGSLAVLLGALDTYVVVTIMRDIMNSVGIPINQLHRITWIVTMYLLGYIAAMPLLGRASDRFGRKLMLQV SLAGFIIGSVVTALAGHFGDFHMLIAGRTIQGVASGALLPITLALGADLWSQRNRAGVLGGIGAAQELGSVLGPLYGIFI VWLLHDWRDVFWINVPLTAIAMVMIHFSLPSHDRSTEPERVDLVGGLLLALALGLAVIGLYNPNPDGKHVLPDYGAPLLV GALVAAVAFFGWERFARTRLIDPAGVHFRPFLSALGASVAAGAALMVTLVDVELFGQGVLQMDQAQAAGMLLWFLIALPI GAVTGGWIATRAGDRAVAFAGLLIAAYGYWLISHWPVDLLADRHNILGLFTVPAMHTDLVVAGLGLGLVIGPLSSATLRV VPSAQHGIASAAVVVARMTGMLIGVAALSAWGLYRFNQILAGLSAAIPPNASLLERAAAIGARYQQAFALMYGEIFTITA IVCVFGAVLGLLISGRKEHADEPEVQEQPTLAPQVEPL
Sequences:
>Translated_518_residues MRAGRRVAISAGSLAVLLGALDTYVVVTIMRDIMNSVGIPINQLHRITWIVTMYLLGYIAAMPLLGRASDRFGRKLMLQV SLAGFIIGSVVTALAGHFGDFHMLIAGRTIQGVASGALLPITLALGADLWSQRNRAGVLGGIGAAQELGSVLGPLYGIFI VWLLHDWRDVFWINVPLTAIAMVMIHFSLPSHDRSTEPERVDLVGGLLLALALGLAVIGLYNPNPDGKHVLPDYGAPLLV GALVAAVAFFGWERFARTRLIDPAGVHFRPFLSALGASVAAGAALMVTLVDVELFGQGVLQMDQAQAAGMLLWFLIALPI GAVTGGWIATRAGDRAVAFAGLLIAAYGYWLISHWPVDLLADRHNILGLFTVPAMHTDLVVAGLGLGLVIGPLSSATLRV VPSAQHGIASAAVVVARMTGMLIGVAALSAWGLYRFNQILAGLSAAIPPNASLLERAAAIGARYQQAFALMYGEIFTITA IVCVFGAVLGLLISGRKEHADEPEVQEQPTLAPQVEPL >Mature_518_residues MRAGRRVAISAGSLAVLLGALDTYVVVTIMRDIMNSVGIPINQLHRITWIVTMYLLGYIAAMPLLGRASDRFGRKLMLQV SLAGFIIGSVVTALAGHFGDFHMLIAGRTIQGVASGALLPITLALGADLWSQRNRAGVLGGIGAAQELGSVLGPLYGIFI VWLLHDWRDVFWINVPLTAIAMVMIHFSLPSHDRSTEPERVDLVGGLLLALALGLAVIGLYNPNPDGKHVLPDYGAPLLV GALVAAVAFFGWERFARTRLIDPAGVHFRPFLSALGASVAAGAALMVTLVDVELFGQGVLQMDQAQAAGMLLWFLIALPI GAVTGGWIATRAGDRAVAFAGLLIAAYGYWLISHWPVDLLADRHNILGLFTVPAMHTDLVVAGLGLGLVIGPLSSATLRV VPSAQHGIASAAVVVARMTGMLIGVAALSAWGLYRFNQILAGLSAAIPPNASLLERAAAIGARYQQAFALMYGEIFTITA IVCVFGAVLGLLISGRKEHADEPEVQEQPTLAPQVEPL
Specific function: Confers resistance to tetracycline and aminoglycosides such as streptomycin and gentamicin
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily
Homologues:
Organism=Escherichia coli, GI87081983, Length=429, Percent_Identity=26.1072261072261, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1790146, Length=151, Percent_Identity=31.7880794701987, Blast_Score=63, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6323735, Length=327, Percent_Identity=26.9113149847095, Blast_Score=80, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6325455, Length=187, Percent_Identity=26.7379679144385, Blast_Score=66, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MFS55_MYCBO (Q7U042)
Other databases:
- EMBL: BX248338 - RefSeq: NP_855097.1 - ProteinModelPortal: Q7U042 - EnsemblBacteria: EBMYCT00000017226 - GeneID: 1092302 - GenomeReviews: BX248333_GR - KEGG: mbo:Mb1445c - GeneTree: EBGT00050000014781 - HOGENOM: HBG564689 - OMA: GWIATRV - ProtClustDB: CLSK791145 - BioCyc: MBOV233413:MB1445C-MONOMER - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829
Pfam domain/function: PF07690 MFS_1; SSF103473 MFS_gen_substrate_transporter
EC number: NA
Molecular weight: Translated: 54689; Mature: 54689
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: PS50850 MFS; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x157940e0)-; HASH(0x14c616e8)-; HASH(0x155ea534)-; HASH(0x15c04c34)-; HASH(0x157ed8e0)-; HASH(0x14544d2c)-; HASH(0x1575a8c0)-; HASH(0x152f9c3c)-; HASH(0x148e00f4)-; HASH(0x14f45fa4)-; HASH(0x15417134)-; HASH(0x15482654)-; HASH(0x154354cc)-; HASH(0x15b47014)-;
Cys/Met content:
0.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAGRRVAISAGSLAVLLGALDTYVVVTIMRDIMNSVGIPINQLHRITWIVTMYLLGYIA CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH AMPLLGRASDRFGRKLMLQVSLAGFIIGSVVTALAGHFGDFHMLIAGRTIQGVASGALLP HHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCCHHH ITLALGADLWSQRNRAGVLGGIGAAQELGSVLGPLYGIFIVWLLHDWRDVFWINVPLTAI HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHH AMVMIHFSLPSHDRSTEPERVDLVGGLLLALALGLAVIGLYNPNPDGKHVLPDYGAPLLV HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH GALVAAVAFFGWERFARTRLIDPAGVHFRPFLSALGASVAAGAALMVTLVDVELFGQGVL HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH QMDQAQAAGMLLWFLIALPIGAVTGGWIATRAGDRAVAFAGLLIAAYGYWLISHWPVDLL HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHH ADRHNILGLFTVPAMHTDLVVAGLGLGLVIGPLSSATLRVVPSAQHGIASAAVVVARMTG HCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHH MLIGVAALSAWGLYRFNQILAGLSAAIPPNASLLERAAAIGARYQQAFALMYGEIFTITA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVCVFGAVLGLLISGRKEHADEPEVQEQPTLAPQVEPL HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCH >Mature Secondary Structure MRAGRRVAISAGSLAVLLGALDTYVVVTIMRDIMNSVGIPINQLHRITWIVTMYLLGYIA CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH AMPLLGRASDRFGRKLMLQVSLAGFIIGSVVTALAGHFGDFHMLIAGRTIQGVASGALLP HHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCCHHH ITLALGADLWSQRNRAGVLGGIGAAQELGSVLGPLYGIFIVWLLHDWRDVFWINVPLTAI HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHH AMVMIHFSLPSHDRSTEPERVDLVGGLLLALALGLAVIGLYNPNPDGKHVLPDYGAPLLV HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH GALVAAVAFFGWERFARTRLIDPAGVHFRPFLSALGASVAAGAALMVTLVDVELFGQGVL HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH QMDQAQAAGMLLWFLIALPIGAVTGGWIATRAGDRAVAFAGLLIAAYGYWLISHWPVDLL HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHH ADRHNILGLFTVPAMHTDLVVAGLGLGLVIGPLSSATLRVVPSAQHGIASAAVVVARMTG HCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHH MLIGVAALSAWGLYRFNQILAGLSAAIPPNASLLERAAAIGARYQQAFALMYGEIFTITA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVCVFGAVLGLLISGRKEHADEPEVQEQPTLAPQVEPL HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12788972