| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is ampH [C]
Identifier: 121637298
GI number: 121637298
Start: 1566026
End: 1567159
Strand: Reverse
Name: ampH [C]
Synonym: BCG_1429c
Alternate gene names: 121637298
Gene position: 1567159-1566026 (Counterclockwise)
Preceding gene: 121637304
Following gene: 121637296
Centisome position: 35.82
GC content: 66.4
Gene sequence:
>1134_bases ATGGTCTGGCAGCGCGAAAAATTGTTGCAAGTCAACGAGATCGGCTATCGCGATATCGACGCGGGCGTGCCCATGCAACG CGACACGCTGTTTCGCATCGCGTCGATGACCAAGCCGGTCACGGTGGCGGCGGCGATGAGCCTGGTCGACGAGGGCAAAC TGGCACTGCGTGACCCGATCACGCGTTGGGCACCGGAGCTCTGCAAGGTGGCCGTGCTGGACGATGCCGCCGGCCCGCTG GATCGCACACATCCCGCGCGACGAGCCATTTTGATCGAGGACCTGCTCACTCACACCAGCGGCCTGGCTTACGGTTTCTC GGTGTCGGGGCCAATTTCGCGGGCCTATCAGCGACTGCCGTTCGGCCAGGGTCCCGACGTTTGGCTGGCAGCGCTGGCAA CCCTTCCGCTCGTGCACCAACCTGGCGACCGGGTGACCTACAGCCACGCCATCGACGTCTTGGGTGTCATTGTCTCCCGC ATCGAGGACGCACCGCTGTACCAGGTCATCGACGAGCGAGTGCTGGGTCCGGCAGGAATGACCGACACCGGCTTCTACGT GTCGGCCGACGCGCAGCGACGGGCCGCGACCATGTACCGGCTCGACGAACAAGACCGGTTGCGGCACGACGTGATGGGGC CGCCACACGTCACGCCGCCGTCGTTCTGTAACGCCGGCGGCGGGTTGTGGTCGACCGCCGATGACTACCTGCGGTTCGTG CGGATGCTGTTGGGCGACGGGACGGTCGACGGGGTCCGGGTGTTGTCACCTGAATCGGTGCGCCTGATGCGCACCGACCG GCTGACCGACGAGCAGAAACGGCACAGCTTTCTGGGGGCGCCGTTCTGGGTGGGCCGCGGCTTCGGGCTGAACCTATCGG TGGTGACCGATCCGGCGAAGTCCAGGCCGCTGTTCGGGCCGGGCGGGCTCGGGACCTTCAGCTGGCCCGGCGCGTACGGG ACATGGTGGCAGGCCGACCCGAGCGCCGACCTGATACTGCTGTATCTGATCCAGCATTGTCCCGATCTGTCCGTGGACGC TGCCGCGGCCGTCGCGGGTAACCCATCCCTGGCGAAACTGCGGACCGCGCAACCAAAATTCGTCCGCCGCACCTATCGGG CGCTCGGGCTCTAG
Upstream 100 bases:
>100_bases CGCTGGCTCGGACAGTATCCTGAACCGGGTGAATCTCGACGGCAATCAGGCGTCCATCCGCGAGGTATGCGACGCGGGCC TGCTTTCCGGCGCGGTAACC
Downstream 100 bases:
>100_bases TGCCGGGTAGACATGTTGACCGAACCTCCCCATGTCGACCGGACCCGGCACACTCGCGGAAACCCAAGGGCCTACCGCGC GCCGTTTCCGACGTTCAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MVWQREKLLQVNEIGYRDIDAGVPMQRDTLFRIASMTKPVTVAAAMSLVDEGKLALRDPITRWAPELCKVAVLDDAAGPL DRTHPARRAILIEDLLTHTSGLAYGFSVSGPISRAYQRLPFGQGPDVWLAALATLPLVHQPGDRVTYSHAIDVLGVIVSR IEDAPLYQVIDERVLGPAGMTDTGFYVSADAQRRAATMYRLDEQDRLRHDVMGPPHVTPPSFCNAGGGLWSTADDYLRFV RMLLGDGTVDGVRVLSPESVRLMRTDRLTDEQKRHSFLGAPFWVGRGFGLNLSVVTDPAKSRPLFGPGGLGTFSWPGAYG TWWQADPSADLILLYLIQHCPDLSVDAAAAVAGNPSLAKLRTAQPKFVRRTYRALGL
Sequences:
>Translated_377_residues MVWQREKLLQVNEIGYRDIDAGVPMQRDTLFRIASMTKPVTVAAAMSLVDEGKLALRDPITRWAPELCKVAVLDDAAGPL DRTHPARRAILIEDLLTHTSGLAYGFSVSGPISRAYQRLPFGQGPDVWLAALATLPLVHQPGDRVTYSHAIDVLGVIVSR IEDAPLYQVIDERVLGPAGMTDTGFYVSADAQRRAATMYRLDEQDRLRHDVMGPPHVTPPSFCNAGGGLWSTADDYLRFV RMLLGDGTVDGVRVLSPESVRLMRTDRLTDEQKRHSFLGAPFWVGRGFGLNLSVVTDPAKSRPLFGPGGLGTFSWPGAYG TWWQADPSADLILLYLIQHCPDLSVDAAAAVAGNPSLAKLRTAQPKFVRRTYRALGL >Mature_377_residues MVWQREKLLQVNEIGYRDIDAGVPMQRDTLFRIASMTKPVTVAAAMSLVDEGKLALRDPITRWAPELCKVAVLDDAAGPL DRTHPARRAILIEDLLTHTSGLAYGFSVSGPISRAYQRLPFGQGPDVWLAALATLPLVHQPGDRVTYSHAIDVLGVIVSR IEDAPLYQVIDERVLGPAGMTDTGFYVSADAQRRAATMYRLDEQDRLRHDVMGPPHVTPPSFCNAGGGLWSTADDYLRFV RMLLGDGTVDGVRVLSPESVRLMRTDRLTDEQKRHSFLGAPFWVGRGFGLNLSVVTDPAKSRPLFGPGGLGTFSWPGAYG TWWQADPSADLILLYLIQHCPDLSVDAAAAVAGNPSLAKLRTAQPKFVRRTYRALGL
Specific function: Binds Penicillin And Contributes To The Normal Morphology Of Escherichia Coli. [C]
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786574, Length=226, Percent_Identity=26.5486725663717, Blast_Score=65, Evalue=7e-12, Organism=Escherichia coli, GI87082101, Length=373, Percent_Identity=25.7372654155496, Blast_Score=62, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: NA
Molecular weight: Translated: 41312; Mature: 41312
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVWQREKLLQVNEIGYRDIDAGVPMQRDTLFRIASMTKPVTVAAAMSLVDEGKLALRDPI CCCCHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHCCH TRWAPELCKVAVLDDAAGPLDRTHPARRAILIEDLLTHTSGLAYGFSVSGPISRAYQRLP HHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEECEECCCHHHHHHHHCC FGQGPDVWLAALATLPLVHQPGDRVTYSHAIDVLGVIVSRIEDAPLYQVIDERVLGPAGM CCCCCHHHHHHHHHHCCEECCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC TDTGFYVSADAQRRAATMYRLDEQDRLRHDVMGPPHVTPPSFCNAGGGLWSTADDYLRFV CCCCEEEECCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCHHHHHHHH RMLLGDGTVDGVRVLSPESVRLMRTDRLTDEQKRHSFLGAPFWVGRGFGLNLSVVTDPAK HHHHCCCCCCCEEEECCCCEEEEHHHCCCCHHHHHHHCCCCCEECCCCCCEEEEEECCHH SRPLFGPGGLGTFSWPGAYGTWWQADPSADLILLYLIQHCPDLSVDAAAAVAGNPSLAKL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCHHHH RTAQPKFVRRTYRALGL HCCCHHHHHHHHHHHCC >Mature Secondary Structure MVWQREKLLQVNEIGYRDIDAGVPMQRDTLFRIASMTKPVTVAAAMSLVDEGKLALRDPI CCCCHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHCCH TRWAPELCKVAVLDDAAGPLDRTHPARRAILIEDLLTHTSGLAYGFSVSGPISRAYQRLP HHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEECEECCCHHHHHHHHCC FGQGPDVWLAALATLPLVHQPGDRVTYSHAIDVLGVIVSRIEDAPLYQVIDERVLGPAGM CCCCCHHHHHHHHHHCCEECCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC TDTGFYVSADAQRRAATMYRLDEQDRLRHDVMGPPHVTPPSFCNAGGGLWSTADDYLRFV CCCCEEEECCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCHHHHHHHH RMLLGDGTVDGVRVLSPESVRLMRTDRLTDEQKRHSFLGAPFWVGRGFGLNLSVVTDPAK HHHHCCCCCCCEEEECCCCEEEEHHHCCCCHHHHHHHCCCCCEECCCCCCEEEEEECCHH SRPLFGPGGLGTFSWPGAYGTWWQADPSADLILLYLIQHCPDLSVDAAAAVAGNPSLAKL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCHHHH RTAQPKFVRRTYRALGL HCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]