| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121637251
Identifier: 121637251
GI number: 121637251
Start: 1510793
End: 1511473
Strand: Direct
Name: 121637251
Synonym: BCG_1382
Alternate gene names: NA
Gene position: 1510793-1511473 (Clockwise)
Preceding gene: 121637245
Following gene: 121637252
Centisome position: 34.54
GC content: 64.46
Gene sequence:
>681_bases GTGAGTCGGGTGCGTCTAGTCATCGCCCAGTGCACTGTCGACTACATCGGCCGGCTCACCGCGCATCTGCCGTCCGCGCG CCGGCTGTTGCTGTTCAAGGCCGACGGATCGGTCAGCGTACATGCTGACGACCGCGCCTACAAGCCGTTGAACTGGATGA GTCCGCCGTGCTGGTTGACCGAAGAGTCCGGCGGCCAGGCGCCAGTGTGGGTGGTCGAGAACAAGGCCGGCGAGCAGCTG CGCATCACTATCGAAGGAATCGAGCACGACAGTAGCCACGAGCTGGGCGTGGACCCCGGGCTGGTCAAGGACGGCGTCGA GGCCCACTTGCAGGCGTTGCTCGCCGAGCACATCCAATTGCTGGGCGAAGGGTACACGCTGGTCCGCCGCGAGTACATGA CCGCGATCGGACCCGTCGACCTGCTGTGCCGCGACGAACGAGGTGGCTCGGTCGCGGTGGAAATCAAGCGGCGTGGCGAG ATCGACGGCGTGGAGCAGCTGACCCGCTACCTCGAGTTGCTCAACCGCGACAGTGTGCTCGCGCCGGTCAAGGGGGTGTT TGCCGCTCAACAGATCAAGCCGCAGGCTCGGATTCTGGCCACCGACCGCGGGATCCGTTGTTTGACATTGGATTACGACA CAATGCGCGGGATGGATAGCGGCGAGTACCGGCTGTTCTGA
Upstream 100 bases:
>100_bases CCCTGGCAAGTGTCGAGTGGTGGCCTTCTCGGATGGCATGGTGACGTCAGCGTAGTGTGTCGGTCACGCTCTAAGGAACA ACGTCGTTGCGCGCTCTAAG
Downstream 100 bases:
>100_bases GTTGCGCGATTAAACTGATGCGATGGCTCGGCGCCGCAAACCGCTGCACCGGCAGCGGCCGGAACCGCCGTCGTGGGCCC TGCGCCGAGTGGAAGCGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MSRVRLVIAQCTVDYIGRLTAHLPSARRLLLFKADGSVSVHADDRAYKPLNWMSPPCWLTEESGGQAPVWVVENKAGEQL RITIEGIEHDSSHELGVDPGLVKDGVEAHLQALLAEHIQLLGEGYTLVRREYMTAIGPVDLLCRDERGGSVAVEIKRRGE IDGVEQLTRYLELLNRDSVLAPVKGVFAAQQIKPQARILATDRGIRCLTLDYDTMRGMDSGEYRLF
Sequences:
>Translated_226_residues MSRVRLVIAQCTVDYIGRLTAHLPSARRLLLFKADGSVSVHADDRAYKPLNWMSPPCWLTEESGGQAPVWVVENKAGEQL RITIEGIEHDSSHELGVDPGLVKDGVEAHLQALLAEHIQLLGEGYTLVRREYMTAIGPVDLLCRDERGGSVAVEIKRRGE IDGVEQLTRYLELLNRDSVLAPVKGVFAAQQIKPQARILATDRGIRCLTLDYDTMRGMDSGEYRLF >Mature_225_residues SRVRLVIAQCTVDYIGRLTAHLPSARRLLLFKADGSVSVHADDRAYKPLNWMSPPCWLTEESGGQAPVWVVENKAGEQLR ITIEGIEHDSSHELGVDPGLVKDGVEAHLQALLAEHIQLLGEGYTLVRREYMTAIGPVDLLCRDERGGSVAVEIKRRGEI DGVEQLTRYLELLNRDSVLAPVKGVFAAQQIKPQARILATDRGIRCLTLDYDTMRGMDSGEYRLF
Specific function: Unknown
COG id: COG1637
COG function: function code L; Predicted nuclease of the RecB family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0286 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002793 [H]
Pfam domain/function: PF01939 DUF91 [H]
EC number: NA
Molecular weight: Translated: 25163; Mature: 25032
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRVRLVIAQCTVDYIGRLTAHLPSARRLLLFKADGSVSVHADDRAYKPLNWMSPPCWLT CCCCEEEEEHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEE EESGGQAPVWVVENKAGEQLRITIEGIEHDSSHELGVDPGLVKDGVEAHLQALLAEHIQL CCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LGEGYTLVRREYMTAIGPVDLLCRDERGGSVAVEIKRRGEIDGVEQLTRYLELLNRDSVL HCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEE APVKGVFAAQQIKPQARILATDRGIRCLTLDYDTMRGMDSGEYRLF HHHHHHHHHHHCCCCEEEEEECCCCEEEEEEHHHHCCCCCCCEECC >Mature Secondary Structure SRVRLVIAQCTVDYIGRLTAHLPSARRLLLFKADGSVSVHADDRAYKPLNWMSPPCWLT CCCEEEEEHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEE EESGGQAPVWVVENKAGEQLRITIEGIEHDSSHELGVDPGLVKDGVEAHLQALLAEHIQL CCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LGEGYTLVRREYMTAIGPVDLLCRDERGGSVAVEIKRRGEIDGVEQLTRYLELLNRDSVL HCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEE APVKGVFAAQQIKPQARILATDRGIRCLTLDYDTMRGMDSGEYRLF HHHHHHHHHHHCCCCEEEEEECCCCEEEEEEHHHHCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]