| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is htrA [H]
Identifier: 121637152
GI number: 121637152
Start: 1395597
End: 1397183
Strand: Direct
Name: htrA [H]
Synonym: BCG_1283
Alternate gene names: 121637152
Gene position: 1395597-1397183 (Clockwise)
Preceding gene: 121637151
Following gene: 121637153
Centisome position: 31.9
GC content: 64.97
Gene sequence:
>1587_bases GTGGATACTAGGGTGGACACGGACAACGCGATGCCTGCACGTTTTAGCGCCCAGATTCAGAATGAGGATGAGGTGACCTC CGACCAAGGCAACAACGGCGGCCCGAACGGCGGAGGCCGCCTGGCGCCGCGCCCGGTTTTTCGGCCACCGGTCGACCCGG CGTCGCGTCAAGCGTTCGGGCGTCCGTCCGGGGTCCAAGGGTCCTTTGTGGCCGAGCGTGTGCGCCCGCAGAAGTACCAG GACCAGTCTGACTTCACACCGAACGATCAGCTTGCTGACCCGGTGCTTCAGGAGGCGTTCGGTCGTCCGTTCGCGGGCGC CGAATCGCTGCAGCGCCATCCCATCGATGCCGGAGCGCTGGCAGCTGAGAAAGACGGTGCCGGCCCCGACGAGCCCGACG ATCCGTGGCGCGACCCCGCGGCCGCGGCCGCGCTGGGGACGCCAGCGCTAGCCGCGCCGGCACCGCACGGTGCGCTGGCC GGCAGCGGCAAGCTGGGTGTGCGCGACGTGCTGTTTGGCGGCAAGGTGTCCTACTTGGCGCTGGGCATCTTGGTCGCTAT CGCACTGGTGATCGGCGGCATCGGCGGTGTCATCGGCCGCAAGACCGCGGAAGTAGTCGATGCGTTCACCACGTCGAAGG TGACCCTGTCGACCACTGGCAATGCCCAGGAACCGGCCGGCCGGTTCACCAAGGTGGCGGCCGCCGTGGCCGATTCGGTG GTGACCATTGAGTCGGTCAGCGACCAGGAGGGCATGCAAGGTTCCGGCGTCATCGTCGATGGCCGCGGCTACATCGTCAC CAACAATCACGTGATCTCTGAGGCGGCCAACAATCCCAGCCAGTTCAAGACGACCGTGGTGCTCAACGACGGCAAGGAGG TGCCCGCCAATCTGGTGGGTCGTGACCCCAAGACCGACTTGGCCGTCCTCAAGGTCGACAACGTCGACAATCTGACCGTG GCCCGGCTCGGTGATTCCAGCAAGGTACGGGTCGGTGACGAAGTCCTCGCGGTCGGCGCGCCCCTGGGGCTGCGCAGTAC GGTGACCCAGGGCATTGTCAGCGCGCTACACCGCCCCGTTCCGTTGTCGGGCGAGGGCTCTGACACCGACACCGTCATTG ACGCAATTCAGACCGACGCCTCGATCAACCACGGTAACTCCGGCGGTCCGCTAATCGACATGGATGCCCAGGTGATTGGC ATCAACACCGCCGGTAAGTCACTGTCGGATAGCGCCAGCGGGCTGGGCTTTGCGATCCCGGTCAACGAGATGAAATTGGT GGCAAATTCTCTGATCAAAGACGGAAAGATCGTGCATCCGACGTTGGGCATCAACACCCGGTCAGTAAGCAACGCGATCG CGTCGGGCGCGCAGGTGGCCAATGTAAAGGCGGGAAGTCCCGCGCAGAAGGGCGGGATCTTGGAGAACGATGTGATCGTC AAGGTCGGTAACCGCGCGGTCGCCGACTCCGACGAGTTCGTCGTCGCCGTGCGCCAGTTGGCTATCGGCCAGGACGCTCC GATAGAGGTGGTCCGCGAGGGTCGGCATGTGACGCTGACGGTGAAACCGGACCCCGATAGCACCTAG
Upstream 100 bases:
>100_bases ATCGGGGCCGGCAATCGCGGGTGCGTCGCTAGCCGGTGAGCCACTTGTCGCAGCGCATGGCGGGGGGTTGCTGCGAGTTC ATGGCGAGTGGTCGCGATCC
Downstream 100 bases:
>100_bases AGTGTTCGCCAACATCGGTTGGGGGGAAATGCTCGTCCTCGTCATGGTCGGGCTGGTGGTGCTTGGCCCGGAGCGGCTCC CGGGTGCCATCCGCTGGGCG
Product: putative serine protease htrA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 528; Mature: 528
Protein sequence:
>528_residues MDTRVDTDNAMPARFSAQIQNEDEVTSDQGNNGGPNGGGRLAPRPVFRPPVDPASRQAFGRPSGVQGSFVAERVRPQKYQ DQSDFTPNDQLADPVLQEAFGRPFAGAESLQRHPIDAGALAAEKDGAGPDEPDDPWRDPAAAAALGTPALAAPAPHGALA GSGKLGVRDVLFGGKVSYLALGILVAIALVIGGIGGVIGRKTAEVVDAFTTSKVTLSTTGNAQEPAGRFTKVAAAVADSV VTIESVSDQEGMQGSGVIVDGRGYIVTNNHVISEAANNPSQFKTTVVLNDGKEVPANLVGRDPKTDLAVLKVDNVDNLTV ARLGDSSKVRVGDEVLAVGAPLGLRSTVTQGIVSALHRPVPLSGEGSDTDTVIDAIQTDASINHGNSGGPLIDMDAQVIG INTAGKSLSDSASGLGFAIPVNEMKLVANSLIKDGKIVHPTLGINTRSVSNAIASGAQVANVKAGSPAQKGGILENDVIV KVGNRAVADSDEFVVAVRQLAIGQDAPIEVVREGRHVTLTVKPDPDST
Sequences:
>Translated_528_residues MDTRVDTDNAMPARFSAQIQNEDEVTSDQGNNGGPNGGGRLAPRPVFRPPVDPASRQAFGRPSGVQGSFVAERVRPQKYQ DQSDFTPNDQLADPVLQEAFGRPFAGAESLQRHPIDAGALAAEKDGAGPDEPDDPWRDPAAAAALGTPALAAPAPHGALA GSGKLGVRDVLFGGKVSYLALGILVAIALVIGGIGGVIGRKTAEVVDAFTTSKVTLSTTGNAQEPAGRFTKVAAAVADSV VTIESVSDQEGMQGSGVIVDGRGYIVTNNHVISEAANNPSQFKTTVVLNDGKEVPANLVGRDPKTDLAVLKVDNVDNLTV ARLGDSSKVRVGDEVLAVGAPLGLRSTVTQGIVSALHRPVPLSGEGSDTDTVIDAIQTDASINHGNSGGPLIDMDAQVIG INTAGKSLSDSASGLGFAIPVNEMKLVANSLIKDGKIVHPTLGINTRSVSNAIASGAQVANVKAGSPAQKGGILENDVIV KVGNRAVADSDEFVVAVRQLAIGQDAPIEVVREGRHVTLTVKPDPDST >Mature_528_residues MDTRVDTDNAMPARFSAQIQNEDEVTSDQGNNGGPNGGGRLAPRPVFRPPVDPASRQAFGRPSGVQGSFVAERVRPQKYQ DQSDFTPNDQLADPVLQEAFGRPFAGAESLQRHPIDAGALAAEKDGAGPDEPDDPWRDPAAAAALGTPALAAPAPHGALA GSGKLGVRDVLFGGKVSYLALGILVAIALVIGGIGGVIGRKTAEVVDAFTTSKVTLSTTGNAQEPAGRFTKVAAAVADSV VTIESVSDQEGMQGSGVIVDGRGYIVTNNHVISEAANNPSQFKTTVVLNDGKEVPANLVGRDPKTDLAVLKVDNVDNLTV ARLGDSSKVRVGDEVLAVGAPLGLRSTVTQGIVSALHRPVPLSGEGSDTDTVIDAIQTDASINHGNSGGPLIDMDAQVIG INTAGKSLSDSASGLGFAIPVNEMKLVANSLIKDGKIVHPTLGINTRSVSNAIASGAQVANVKAGSPAQKGGILENDVIV KVGNRAVADSDEFVVAVRQLAIGQDAPIEVVREGRHVTLTVKPDPDST
Specific function: Serine Protease That Is Required At High Temperature. Involved In The Degradation Of Damaged Proteins. It Can Degrade Icia, Ada, Casein And Globin. Shared Specificity With Degq. [C]
COG id: COG0265
COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PDZ (DHR) domains [H]
Homologues:
Organism=Homo sapiens, GI22129776, Length=294, Percent_Identity=35.3741496598639, Blast_Score=149, Evalue=4e-36, Organism=Homo sapiens, GI4506141, Length=292, Percent_Identity=34.2465753424658, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI24308541, Length=290, Percent_Identity=32.7586206896552, Blast_Score=120, Evalue=4e-27, Organism=Homo sapiens, GI7019477, Length=302, Percent_Identity=31.7880794701987, Blast_Score=117, Evalue=2e-26, Organism=Escherichia coli, GI1786356, Length=278, Percent_Identity=36.3309352517986, Blast_Score=166, Evalue=3e-42, Organism=Escherichia coli, GI1789629, Length=284, Percent_Identity=38.3802816901408, Blast_Score=164, Evalue=1e-41, Organism=Escherichia coli, GI1789630, Length=279, Percent_Identity=37.6344086021505, Blast_Score=150, Evalue=2e-37, Organism=Drosophila melanogaster, GI24646839, Length=361, Percent_Identity=31.0249307479224, Blast_Score=137, Evalue=1e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001478 - InterPro: IPR009003 - InterPro: IPR011782 - InterPro: IPR001254 - InterPro: IPR001940 [H]
Pfam domain/function: PF00595 PDZ; PF00089 Trypsin [H]
EC number: 3.4.21.- [C]
Molecular weight: Translated: 54183; Mature: 54183
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTRVDTDNAMPARFSAQIQNEDEVTSDQGNNGGPNGGGRLAPRPVFRPPVDPASRQAFG CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC RPSGVQGSFVAERVRPQKYQDQSDFTPNDQLADPVLQEAFGRPFAGAESLQRHPIDAGAL CCCCCCHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCE AAEKDGAGPDEPDDPWRDPAAAAALGTPALAAPAPHGALAGSGKLGVRDVLFGGKVSYLA EECCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHH LGILVAIALVIGGIGGVIGRKTAEVVDAFTTSKVTLSTTGNAQEPAGRFTKVAAAVADSV HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCE VTIESVSDQEGMQGSGVIVDGRGYIVTNNHVISEAANNPSQFKTTVVLNDGKEVPANLVG EEEECCCCCCCCCCCCEEECCCEEEEECCEEEECCCCCCCCEEEEEEEECCCCCCHHHCC RDPKTDLAVLKVDNVDNLTVARLGDSSKVRVGDEVLAVGAPLGLRSTVTQGIVSALHRPV CCCCCCEEEEEECCCCCEEEEECCCCCCEEECCEEEEECCCCCHHHHHHHHHHHHHCCCC PLSGEGSDTDTVIDAIQTDASINHGNSGGPLIDMDAQVIGINTAGKSLSDSASGLGFAIP CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCEEEEEECCCCCCCCCCCCCEEEEC VNEMKLVANSLIKDGKIVHPTLGINTRSVSNAIASGAQVANVKAGSPAQKGGILENDVIV HHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHCCCEEEEECCCCCHHHCCCCCCCEEE KVGNRAVADSDEFVVAVRQLAIGQDAPIEVVREGRHVTLTVKPDPDST EECCEEECCCCHHHHHHHHHHCCCCCCHHHHHCCCEEEEEECCCCCCC >Mature Secondary Structure MDTRVDTDNAMPARFSAQIQNEDEVTSDQGNNGGPNGGGRLAPRPVFRPPVDPASRQAFG CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC RPSGVQGSFVAERVRPQKYQDQSDFTPNDQLADPVLQEAFGRPFAGAESLQRHPIDAGAL CCCCCCHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCE AAEKDGAGPDEPDDPWRDPAAAAALGTPALAAPAPHGALAGSGKLGVRDVLFGGKVSYLA EECCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHH LGILVAIALVIGGIGGVIGRKTAEVVDAFTTSKVTLSTTGNAQEPAGRFTKVAAAVADSV HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCE VTIESVSDQEGMQGSGVIVDGRGYIVTNNHVISEAANNPSQFKTTVVLNDGKEVPANLVG EEEECCCCCCCCCCCCEEECCCEEEEECCEEEECCCCCCCCEEEEEEEECCCCCCHHHCC RDPKTDLAVLKVDNVDNLTVARLGDSSKVRVGDEVLAVGAPLGLRSTVTQGIVSALHRPV CCCCCCEEEEEECCCCCEEEEECCCCCCEEECCEEEEECCCCCHHHHHHHHHHHHHCCCC PLSGEGSDTDTVIDAIQTDASINHGNSGGPLIDMDAQVIGINTAGKSLSDSASGLGFAIP CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCEEEEEECCCCCCCCCCCCCEEEEC VNEMKLVANSLIKDGKIVHPTLGINTRSVSNAIASGAQVANVKAGSPAQKGGILENDVIV HHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHCCCEEEEECCCCCHHHCCCCCCCEEE KVGNRAVADSDEFVVAVRQLAIGQDAPIEVVREGRHVTLTVKPDPDST EECCEEECCCCHHHHHHHHHHCCCCCCHHHHHCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: Serine endopeptidases [C]
General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8550509; 11481430 [H]