| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is fbiC
Identifier: 121637105
GI number: 121637105
Start: 1334276
End: 1336846
Strand: Direct
Name: fbiC
Synonym: BCG_1236
Alternate gene names: 121637105
Gene position: 1334276-1336846 (Clockwise)
Preceding gene: 121637103
Following gene: 121637109
Centisome position: 30.5
GC content: 66.63
Gene sequence:
>2571_bases GTGCCGCAGCCTGTAGGTCGGAAGTCCACCGCTCTGCCGAGTCCCGTTGTACCGCCCCAGGCAAATGCCTCAGCGTTGCG GCGGGTACTGCGACGGGCCCGAGATGGTGTCACGCTGAACGTGGATGAGGCGGCCATAGCGATGACCGCACGCGGTGACG AGCTGGCCGACCTGTGCGCGAGCGCCGCGCGGGTGCGCGATGCGGGTCTCGTGTCGGCCGGCCGGCACGGGCCCAGCGGC AGGTTGGCGATCAGCTATTCGCGCAAGGTGTTTATCCCGGTCACCCGGTTATGCCGGGACAATTGCCACTATTGCACGTT CGTCACCGTGCCGGGCAAGCTACGCGCCCAAGGTTCCAGCACGTATATGGAACCCGACGAGATCCTCGACGTTGCCCGCC GAGGTGCCGAATTCGGTTGCAAGGAAGCGCTATTCACTCTCGGTGACCGTCCGGAGGCGCGTTGGCGCCAGGCACGCGAA TGGCTCGGCGAACGGGGCTATGACTCCACGTTGTCCTACGTGCGCGCGATGGCAATCCGTGTGCTGGAGCAAACCGGGCT GTTGCCGCACCTGAACCCGGGTGTGATGAGCTGGTCGGAGATGTCGCGGCTCAAACCGGTGGCGCCGTCGATGGGCATGA TGCTGGAGACGACCTCGCGACGGCTGTTCGAAACCAAGGGGCTCGCCCACTACGGCAGCCCTGACAAAGACCCGGCGGTG CGGCTGCGTGTCCTGACCGACGCCGGCCGGTTGTCCATTCCGTTTACCACCGGTCTGTTGGTCGGCATCGGCGAGACGCT ATCCGAGCGCGCCGATACGTTACATGCGATTCGCAAGTCGCACAAGGAGTTCGGGCATATCCAAGAAGTGATCGTGCAGA ACTTCCGCGCCAAGGAACACACCGCGATGGCCGCCTTCCCCGATGCCGGAATCGAGGATTACCTGGCGACGGTTGCGGTG GCGCGGCTGGTGCTGGGCCCGGGCATGCGCATCCAGGCGCCGCCGAACCTGGTGTCTGGCGACGAATGCCGGGCGCTGGT TGGCGCCGGGGTCGACGACTGGGGCGGTGTCTCACCGTTGACGCCCGACCATGTCAACCCCGAACGGCCCTGGCCCGCTT TGGACGAGCTGGCGGCGGTCACCGCCGAAGCCGGCTACGACATGGTGCAGCGGCTGACCGCGCAACCCAAATACGTACAG GCGGGCGCGGCGTGGATCGACCCGCGGGTGCGGGGACATGTGGTGGCGCTGGCGGATCCGGCGACCGGCCTGGCCCGCGA CGTCAACCCGGTGGGCATGCCGTGGCAGGAGCCCGACGACGTGGCGTCCTGGGGCCGGGTCGATCTGGGCGCAGCGATCG ACACTCAGGGCCGCAATACCGCAGTGCGCAGCGACCTGGCCAGCGCCTTCGGTGACTGGGAATCGATCCGCGAGCAGGTG CACGAGCTGGCGGTCCGCGCTCCGGAACGCATTGACACCGATGTGCTTGCCGCCCTGCGATCGGCGGAGCGTGCGCCCGC CGGCTGCACCGACGGCGAGTATCTGGCGCTTGCCACCGCCGACGGTCCTGCGCTGGAAGCCGTTGCCGCACTGGCTGATT CGTTGCGCCGCGATGTCGTCGGCGACGAGGTGACCTTTGTGGTCAACCGTAACATCAACTTCACCAACATCTGCTACACC GGTTGCCGGTTCTGCGCGTTCGCCCAGCGAAAGGGTGACGCCGACGCCTACTCGCTGTCGGTCGGAGAGGTCGCCGACCG GGCATGGGAGGCCCACGTCGCCGGGGCCACCGAAGTATGCATGCAGGGCGGTATCGATCCCGAGCTACCGGTCACCGGCT ACGCCGATCTGGTTCGTGCCGTCAAGGCGCGGGTGCCCTCCATGCATGTGCACGCGTTTTCCCCGATGGAGATCGCCAAC GGCGTCACCAAGAGCGGGCTGAGCATTCGCGAGTGGCTGATCGGCCTGCGCGAGGCCGGGCTGGATACCATCCCGGGTAC CGCCGCGGAAATCCTGGACGACGAGGTTCGCTGGGTGCTGACCAAGGGCAAGCTGCCGACGTCATTGTGGATCGAAATCG TGACGACCGCCCACGAGGTGGGTCTGCGGTCATCATCGACGATGATGTACGGGCATGTGGACAGTCCACGGCACTGGGTC GCCCATCTTAACGTGCTGCGCGATATTCAGGACCGTACCGGCGGCTTCACCGAGTTCGTCCCGTTGCCGTTCGTGCACCA GAATTCACCGTTGTACCTGGCCGGTGCGGCGCGCCCCGGGCCCAGCCATCGCGACAACCGCGCGGTACATGCTTTGGCGC GGATCATGTTGCACGGCCGCATCTCGCACATTCAGACCAGCTGGGTGAAACTTGGAGTGCGGCGCACCCAGGTGATGCTC GAAGGTGGCGCCAACGACCTGGGCGGCACGCTGATGGAGGAGACCATCTCGCGGATGGCCGGTTCCGAACACGGATCGGC CAAGACCGTCGCTGAGCTGGTCGCGATCGCCGAAGGCATCGGCCGCCCGGCGCGCCAGCGCACTACCACATACGCCCTGC TTGCGGCCTAG
Upstream 100 bases:
>100_bases CGGCCTGGCGCTACTGTTGCGCTTATGGCGCCAAGGTTGGCCAGCATCTCACCTGGTGGGGCGTGCGGGTGATATCAGAT TGCAGGGAAGGTATACCAAC
Downstream 100 bases:
>100_bases CCCCGGCGACGATGCCGGGTCGCGGGATGCGGCCCGTTGAGGAGCGGGGCAATCTGGCCTAGCCCCGGCGACGATGCCGG GTCGCGGGATGGGGCCCGCA
Product: FO synthase
Products: NA
Alternate protein names: 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase
Number of amino acids: Translated: 856; Mature: 855
Protein sequence:
>856_residues MPQPVGRKSTALPSPVVPPQANASALRRVLRRARDGVTLNVDEAAIAMTARGDELADLCASAARVRDAGLVSAGRHGPSG RLAISYSRKVFIPVTRLCRDNCHYCTFVTVPGKLRAQGSSTYMEPDEILDVARRGAEFGCKEALFTLGDRPEARWRQARE WLGERGYDSTLSYVRAMAIRVLEQTGLLPHLNPGVMSWSEMSRLKPVAPSMGMMLETTSRRLFETKGLAHYGSPDKDPAV RLRVLTDAGRLSIPFTTGLLVGIGETLSERADTLHAIRKSHKEFGHIQEVIVQNFRAKEHTAMAAFPDAGIEDYLATVAV ARLVLGPGMRIQAPPNLVSGDECRALVGAGVDDWGGVSPLTPDHVNPERPWPALDELAAVTAEAGYDMVQRLTAQPKYVQ AGAAWIDPRVRGHVVALADPATGLARDVNPVGMPWQEPDDVASWGRVDLGAAIDTQGRNTAVRSDLASAFGDWESIREQV HELAVRAPERIDTDVLAALRSAERAPAGCTDGEYLALATADGPALEAVAALADSLRRDVVGDEVTFVVNRNINFTNICYT GCRFCAFAQRKGDADAYSLSVGEVADRAWEAHVAGATEVCMQGGIDPELPVTGYADLVRAVKARVPSMHVHAFSPMEIAN GVTKSGLSIREWLIGLREAGLDTIPGTAAEILDDEVRWVLTKGKLPTSLWIEIVTTAHEVGLRSSSTMMYGHVDSPRHWV AHLNVLRDIQDRTGGFTEFVPLPFVHQNSPLYLAGAARPGPSHRDNRAVHALARIMLHGRISHIQTSWVKLGVRRTQVML EGGANDLGGTLMEETISRMAGSEHGSAKTVAELVAIAEGIGRPARQRTTTYALLAA
Sequences:
>Translated_856_residues MPQPVGRKSTALPSPVVPPQANASALRRVLRRARDGVTLNVDEAAIAMTARGDELADLCASAARVRDAGLVSAGRHGPSG RLAISYSRKVFIPVTRLCRDNCHYCTFVTVPGKLRAQGSSTYMEPDEILDVARRGAEFGCKEALFTLGDRPEARWRQARE WLGERGYDSTLSYVRAMAIRVLEQTGLLPHLNPGVMSWSEMSRLKPVAPSMGMMLETTSRRLFETKGLAHYGSPDKDPAV RLRVLTDAGRLSIPFTTGLLVGIGETLSERADTLHAIRKSHKEFGHIQEVIVQNFRAKEHTAMAAFPDAGIEDYLATVAV ARLVLGPGMRIQAPPNLVSGDECRALVGAGVDDWGGVSPLTPDHVNPERPWPALDELAAVTAEAGYDMVQRLTAQPKYVQ AGAAWIDPRVRGHVVALADPATGLARDVNPVGMPWQEPDDVASWGRVDLGAAIDTQGRNTAVRSDLASAFGDWESIREQV HELAVRAPERIDTDVLAALRSAERAPAGCTDGEYLALATADGPALEAVAALADSLRRDVVGDEVTFVVNRNINFTNICYT GCRFCAFAQRKGDADAYSLSVGEVADRAWEAHVAGATEVCMQGGIDPELPVTGYADLVRAVKARVPSMHVHAFSPMEIAN GVTKSGLSIREWLIGLREAGLDTIPGTAAEILDDEVRWVLTKGKLPTSLWIEIVTTAHEVGLRSSSTMMYGHVDSPRHWV AHLNVLRDIQDRTGGFTEFVPLPFVHQNSPLYLAGAARPGPSHRDNRAVHALARIMLHGRISHIQTSWVKLGVRRTQVML EGGANDLGGTLMEETISRMAGSEHGSAKTVAELVAIAEGIGRPARQRTTTYALLAA >Mature_855_residues PQPVGRKSTALPSPVVPPQANASALRRVLRRARDGVTLNVDEAAIAMTARGDELADLCASAARVRDAGLVSAGRHGPSGR LAISYSRKVFIPVTRLCRDNCHYCTFVTVPGKLRAQGSSTYMEPDEILDVARRGAEFGCKEALFTLGDRPEARWRQAREW LGERGYDSTLSYVRAMAIRVLEQTGLLPHLNPGVMSWSEMSRLKPVAPSMGMMLETTSRRLFETKGLAHYGSPDKDPAVR LRVLTDAGRLSIPFTTGLLVGIGETLSERADTLHAIRKSHKEFGHIQEVIVQNFRAKEHTAMAAFPDAGIEDYLATVAVA RLVLGPGMRIQAPPNLVSGDECRALVGAGVDDWGGVSPLTPDHVNPERPWPALDELAAVTAEAGYDMVQRLTAQPKYVQA GAAWIDPRVRGHVVALADPATGLARDVNPVGMPWQEPDDVASWGRVDLGAAIDTQGRNTAVRSDLASAFGDWESIREQVH ELAVRAPERIDTDVLAALRSAERAPAGCTDGEYLALATADGPALEAVAALADSLRRDVVGDEVTFVVNRNINFTNICYTG CRFCAFAQRKGDADAYSLSVGEVADRAWEAHVAGATEVCMQGGIDPELPVTGYADLVRAVKARVPSMHVHAFSPMEIANG VTKSGLSIREWLIGLREAGLDTIPGTAAEILDDEVRWVLTKGKLPTSLWIEIVTTAHEVGLRSSSTMMYGHVDSPRHWVA HLNVLRDIQDRTGGFTEFVPLPFVHQNSPLYLAGAARPGPSHRDNRAVHALARIMLHGRISHIQTSWVKLGVRRTQVMLE GGANDLGGTLMEETISRMAGSEHGSAKTVAELVAIAEGIGRPARQRTTTYALLAA
Specific function: Catalyzes the radical-mediated transfer of the hydroxybenzyl group from 4-hydroxyphenylpyruvate (HPP) to 5-amino- 6-ribitylamino-2,4(1H,3H)-pyrimidinedione to form 7,8-didemethyl- 8-hydroxy-5-deazariboflavin (FO) (Probable)
COG id: COG1060
COG function: function code HR; Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the radical SAM superfamily. CofH family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FBIC_MYCBO (Q7U0G9)
Other databases:
- EMBL: AF479769 - EMBL: BX248337 - RefSeq: NP_854860.1 - ProteinModelPortal: Q7U0G9 - EnsemblBacteria: EBMYCT00000017233 - GeneID: 1090495 - GenomeReviews: BX248333_GR - KEGG: mbo:Mb1206 - GeneTree: EBGT00050000016725 - HOGENOM: HBG335564 - OMA: RAGIDDW - ProtClustDB: PRK09234 - BioCyc: MBOV233413:MB1206-MONOMER - BioCyc: MetaCyc:MONOMER-12180 - HAMAP: MF_01611 - HAMAP: MF_01612 - InterPro: IPR013785 - InterPro: IPR019940 - InterPro: IPR006638 - InterPro: IPR019939 - InterPro: IPR020050 - InterPro: IPR007197 - Gene3D: G3DSA:3.20.20.70 - SMART: SM00729 - TIGRFAMs: TIGR00423 - TIGRFAMs: TIGR03550 - TIGRFAMs: TIGR03551
Pfam domain/function: PF04055 Radical_SAM
EC number: NA
Molecular weight: Translated: 92507; Mature: 92376
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQPVGRKSTALPSPVVPPQANASALRRVLRRARDGVTLNVDEAAIAMTARGDELADLCA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCEEEEECCCHHHHHHHH SAARVRDAGLVSAGRHGPSGRLAISYSRKVFIPVTRLCRDNCHYCTFVTVPGKLRAQGSS HHHHHHHCCHHHCCCCCCCCCEEEEECCEEEEEHHHHHHCCCCEEEEEECCCCEECCCCC TYMEPDEILDVARRGAEFGCKEALFTLGDRPEARWRQAREWLGERGYDSTLSYVRAMAIR CCCCHHHHHHHHHCCHHCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH VLEQTGLLPHLNPGVMSWSEMSRLKPVAPSMGMMLETTSRRLFETKGLAHYGSPDKDPAV HHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCE RLRVLTDAGRLSIPFTTGLLVGIGETLSERADTLHAIRKSHKEFGHIQEVIVQNFRAKEH EEEEEECCCCEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH TAMAAFPDAGIEDYLATVAVARLVLGPGMRIQAPPNLVSGDECRALVGAGVDDWGGVSPL HEEEECCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHCCCCCCCCCCCCC TPDHVNPERPWPALDELAAVTAEAGYDMVQRLTAQPKYVQAGAAWIDPRVRGHVVALADP CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHCCCCCCCEEEEEECC ATGLARDVNPVGMPWQEPDDVASWGRVDLGAAIDTQGRNTAVRSDLASAFGDWESIREQV CCHHHCCCCCCCCCCCCCHHHHHCCCEEECCEECCCCCCHHHHHHHHHHHCCHHHHHHHH HELAVRAPERIDTDVLAALRSAERAPAGCTDGEYLALATADGPALEAVAALADSLRRDVV HHHHHCCCHHCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHC GDEVTFVVNRNINFTNICYTGCRFCAFAQRKGDADAYSLSVGEVADRAWEAHVAGATEVC CCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHCCHHHHH MQGGIDPELPVTGYADLVRAVKARVPSMHVHAFSPMEIANGVTKSGLSIREWLIGLREAG HHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCCHHHHHHHHHHHCC LDTIPGTAAEILDDEVRWVLTKGKLPTSLWIEIVTTAHEVGLRSSSTMMYGHVDSPRHWV CCCCCCCHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHH AHLNVLRDIQDRTGGFTEFVPLPFVHQNSPLYLAGAARPGPSHRDNRAVHALARIMLHGR HHHHHHHHHHHHCCCCCEECCCCEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHH ISHIQTSWVKLGVRRTQVMLEGGANDLGGTLMEETISRMAGSEHGSAKTVAELVAIAEGI HHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC GRPARQRTTTYALLAA CCCHHHHCCEEEEEEC >Mature Secondary Structure PQPVGRKSTALPSPVVPPQANASALRRVLRRARDGVTLNVDEAAIAMTARGDELADLCA CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCEEEEECCCHHHHHHHH SAARVRDAGLVSAGRHGPSGRLAISYSRKVFIPVTRLCRDNCHYCTFVTVPGKLRAQGSS HHHHHHHCCHHHCCCCCCCCCEEEEECCEEEEEHHHHHHCCCCEEEEEECCCCEECCCCC TYMEPDEILDVARRGAEFGCKEALFTLGDRPEARWRQAREWLGERGYDSTLSYVRAMAIR CCCCHHHHHHHHHCCHHCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH VLEQTGLLPHLNPGVMSWSEMSRLKPVAPSMGMMLETTSRRLFETKGLAHYGSPDKDPAV HHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCE RLRVLTDAGRLSIPFTTGLLVGIGETLSERADTLHAIRKSHKEFGHIQEVIVQNFRAKEH EEEEEECCCCEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH TAMAAFPDAGIEDYLATVAVARLVLGPGMRIQAPPNLVSGDECRALVGAGVDDWGGVSPL HEEEECCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHCCCCCCCCCCCCC TPDHVNPERPWPALDELAAVTAEAGYDMVQRLTAQPKYVQAGAAWIDPRVRGHVVALADP CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHCCCCCCCEEEEEECC ATGLARDVNPVGMPWQEPDDVASWGRVDLGAAIDTQGRNTAVRSDLASAFGDWESIREQV CCHHHCCCCCCCCCCCCCHHHHHCCCEEECCEECCCCCCHHHHHHHHHHHCCHHHHHHHH HELAVRAPERIDTDVLAALRSAERAPAGCTDGEYLALATADGPALEAVAALADSLRRDVV HHHHHCCCHHCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHC GDEVTFVVNRNINFTNICYTGCRFCAFAQRKGDADAYSLSVGEVADRAWEAHVAGATEVC CCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHCCHHHHH MQGGIDPELPVTGYADLVRAVKARVPSMHVHAFSPMEIANGVTKSGLSIREWLIGLREAG HHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCCHHHHHHHHHHHCC LDTIPGTAAEILDDEVRWVLTKGKLPTSLWIEIVTTAHEVGLRSSSTMMYGHVDSPRHWV CCCCCCCHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHH AHLNVLRDIQDRTGGFTEFVPLPFVHQNSPLYLAGAARPGPSHRDNRAVHALARIMLHGR HHHHHHHHHHHHCCCCCEECCCCEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHH ISHIQTSWVKLGVRRTQVMLEGGANDLGGTLMEETISRMAGSEHGSAKTVAELVAIAEGI HHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC GRPARQRTTTYALLAA CCCHHHHCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11948155; 12788972