| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121637001
Identifier: 121637001
GI number: 121637001
Start: 1227578
End: 1228414
Strand: Direct
Name: 121637001
Synonym: BCG_1130
Alternate gene names: NA
Gene position: 1227578-1228414 (Clockwise)
Preceding gene: 121636995
Following gene: 121637002
Centisome position: 28.06
GC content: 62.72
Gene sequence:
>837_bases GTGCGGGAGACAAGCAACCCGGTATTTCGTTCGTTGCCTAAGCAGCGGGGCGGATACGCGCAATTCGGAACTGGCACCGC CCAGCAGGGATTCCCAGCCGATCCCTACCTGGCGCCCTATCGGGAAGCAAAGGCCACCCGCCCGCTGACCATCGACGATG TCGTGACCAAGACGGGCCTGACGCTGGCTATGTTGGCGGGCACCGCCGTCGTCTCCTACTTCCTGGTTGTGTCGAACGTC GCACTGGCCATGCCGCTGACCTTGGTGGGGGCTTTGGGTGGTTTGGCGCTGGTGCTGGTGGCCACCTTCGGCCGCAAGCA GGACAACCCGGCGATCGTGCTCAGCTACGCGGCGCTCGAGGGCCTGTTCCTGGGTGCCATCTCGTTCGTCTTGGCTAACT TCACGGTGGCGTCCGCGAATGCTGGGGTGCTGATCGGGGAGGCCATCTTAGGGACGATGGGTGTGTTCTTCGGCATGCTC GTCGTCTACAAGACAGGGGCCATCCGGGTCACCCCCAAGTTCACCCGAATGGTGGTCGCTGCGCTGTTCGGCGTGCTGGT CTTGATGCTCGGCAACCTCGTGCTGGCGATGTTCAATGTCGGCGGCGGTGAAGGCTTGGGCTTACGCAGCCCCGGACCGC TGGGGATCATCTTCTCGCTGGTGTGCATCGGCATCGCGGCGTTCAGCTTCCTGATCGACTTCGATGCGGCTGATCAGATG ATTCGCGCGGGAGCACCGGAGAAGGCGGCATGGGGCGTCGCGTTAGGCCTGACCGTAACGCTGGTCTGGTTGTACATCGA GATCCTGCGCCTGCTCAGTTATCTACAGAATGAGTAG
Upstream 100 bases:
>100_bases ACCCGGATGACAACGCTGGCCGGGAACCCGGGCCTACTACTGATCGTTGAGCGGATGTTCGCACAGCTCGTAGCCATAGC CATCAAGAGAGGATCCGACG
Downstream 100 bases:
>100_bases CGCTCGTTGGCCGTTGATTCTGCGTCCACCAGGCTGACCACTCGCACTTTTGCGTGGTAGACGCAGGATCAACGGCTGTG TCGGTGGGTGCTGACACCAT
Product: putative transmembrane protein
Products: NA
Alternate protein names: Transmembrane Protein; Permease Of Facilitator Superfamily Protein; Membrane Spanning Protein
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MRETSNPVFRSLPKQRGGYAQFGTGTAQQGFPADPYLAPYREAKATRPLTIDDVVTKTGLTLAMLAGTAVVSYFLVVSNV ALAMPLTLVGALGGLALVLVATFGRKQDNPAIVLSYAALEGLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGML VVYKTGAIRVTPKFTRMVVAALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIAAFSFLIDFDAADQM IRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE
Sequences:
>Translated_278_residues MRETSNPVFRSLPKQRGGYAQFGTGTAQQGFPADPYLAPYREAKATRPLTIDDVVTKTGLTLAMLAGTAVVSYFLVVSNV ALAMPLTLVGALGGLALVLVATFGRKQDNPAIVLSYAALEGLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGML VVYKTGAIRVTPKFTRMVVAALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIAAFSFLIDFDAADQM IRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE >Mature_278_residues MRETSNPVFRSLPKQRGGYAQFGTGTAQQGFPADPYLAPYREAKATRPLTIDDVVTKTGLTLAMLAGTAVVSYFLVVSNV ALAMPLTLVGALGGLALVLVATFGRKQDNPAIVLSYAALEGLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGML VVYKTGAIRVTPKFTRMVVAALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIAAFSFLIDFDAADQM IRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE
Specific function: Unknown
COG id: COG4760
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29172; Mature: 29172
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRETSNPVFRSLPKQRGGYAQFGTGTAQQGFPADPYLAPYREAKATRPLTIDDVVTKTGL CCCCCCHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHCCH TLAMLAGTAVVSYFLVVSNVALAMPLTLVGALGGLALVLVATFGRKQDNPAIVLSYAALE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHH GLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTGAIRVTPKFTRMVVA HHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHH ALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIAAFSFLIDFDAADQM HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRETSNPVFRSLPKQRGGYAQFGTGTAQQGFPADPYLAPYREAKATRPLTIDDVVTKTGL CCCCCCHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHCCH TLAMLAGTAVVSYFLVVSNVALAMPLTLVGALGGLALVLVATFGRKQDNPAIVLSYAALE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHH GLFLGAISFVLANFTVASANAGVLIGEAILGTMGVFFGMLVVYKTGAIRVTPKFTRMVVA HHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHH ALFGVLVLMLGNLVLAMFNVGGGEGLGLRSPGPLGIIFSLVCIGIAAFSFLIDFDAADQM HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IRAGAPEKAAWGVALGLTVTLVWLYIEILRLLSYLQNE HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA