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The map label for this gene is rpfB

Identifier: 121636938

GI number: 121636938

Start: 1158580

End: 1159668

Strand: Direct

Name: rpfB

Synonym: BCG_1066

Alternate gene names: NA

Gene position: 1158580-1159668 (Clockwise)

Preceding gene: 121636937

Following gene: 121636939

Centisome position: 26.48

GC content: 68.04

Gene sequence:

>1089_bases
ATGTTGCGCCTGGTAGTCGGTGCGCTGCTGCTGGTGTTGGCGTTCGCCGGTGGCTATGCGGTCGCCGCATGCAAAACGGT
GACGTTGACCGTCGACGGAACCGCGATGCGGGTGACCACGATGAAATCGCGGGTGATCGACATCGTCGAAGAGAACGGGT
TCTCAGTCGACGACCGCGACGACCTGTATCCCGCGGCCGGCGTGCAGGTCCATGACGCCGACACCATCGTGCTGCGGCGT
AGCCGTCCGCTGCAGATCTCGCTGGATGGTCACGACGCTAAGCAGGTGTGGACGACCGCGTCGACGGTGGACGAGGCGCT
GGCCCAACTCGCGATGACCGACACGGCGCCGGCCGCGGCTTCTCGCGCCAGCCGCGTCCCGCTGTCCGGGATGGCGCTAC
CGGTCGTCAGCGCCAAGACGGTGCAGCTCAACGACGGCGGGTTGGTGCGCACGGTGCACTTGCCGGCCCCCAATGTCGCG
GGGCTGCTGAGTGCGGCCGGCGTGCCGCTGTTGCAAAGCGACCACGTGGTGCCCGCCGCGACGGCCCCGATCGTCGAAGG
CATGCAGATCCAGGTGACCCGCAATCGGATCAAGAAGGTCACCGAGCGGCTGCCGCTGCCGCCGAACGCGCGTCGTGTCG
AGGACCCGGAGATGAACATGAGCCGGGAGGTCGTCGAAGACCCGGGGGTTCCGGGGACCCAGGATGTGACGTTCGCGGTA
GCTGAGGTCAACGGCGTCGAGACCGGCCGTTTGCCCGTCGCCAACGTCGTGGTGACCCCGGCCCACGAAGCCGTGGTGCG
GGTGGGCACCAAGCCCGGTACCGAGGTGCCCCCGGTGATCGACGAAAGCATCTGGGACGCGATCGCCGGCTGTGAGGCCG
GTGGCAACTGGGCGATCAACACCGGCAACGGGTATTACGGTGGTGTGCAGTTTGACCAGGGCACCTGGGAGGCCAACGGC
GGGCTGCGGTATGCACCCCGCGCTGACCTCGCCACCCGCGAAGAGCAGATCGCCGTTGCCGAGGTGACCCGACTGCGTCA
AGGTTGGGGCGCCTGGCCGGTATGTGCTGTACGAGCGGGTGCGCGCTGA

Upstream 100 bases:

>100_bases
ATTTTGCTTTTTGTTCGCTGTGTAGGTGGTTGAGTGTTGCCGAGGTCGGGGATATAGCGCGTTGACTCTACTTACCAAAC
TTCATCAGACCCAATCACCG

Downstream 100 bases:

>100_bases
CCATCCGGCTGCTCGGGCGCACTGAGATCAGGCGGCTGGCCAAAGAGCTCGACTTTCGGCCGCGCAAATCTCTCGGACAG
AACTTCGTGCACGACGCCAA

Product: putative resuscitation-promoting factor rpfB

Products: NA

Alternate protein names: Secreted Protein; Transglycosylase Domain Protein; Resuscitation-Promoting Factor RpfA; Resuscitation-Promoting Factor; Resuscitation-Promoting Factor RpfB; Transglycosylase-Like Protein; Peptidase; Transglycosylase Family Protein; M23 Family Secreted Peptidase; G5 Domain-Containing Protein; M23 Peptidase Domain-Containing Protein; Resuscitation-Promoting Factor RpfC; Resuscitation-Promoting Factor RpfE; Transglycosylase-Like Domain Protein; Resuscitation-Promoting Factor-Like Protein; Transglycosylase; Resuscitation-Promoting Factor Rpfe; Resuscitation-Promoting Factor RpfD; N-Acetylmuramoyl-L-Alanine Amidase; FG-GAP Repeat Domain-Containing Protein; 3D Domain-Containing Protein; Secreted Esterase; Resuscitation-Promoting Factor Rpfd; LOW QUALITY PROTEIN Lipoprotein; G5 Domain Protein; Secreted Transglycosydase; Resuscitation-Promoting Factor Rpfb; G5 Domain Transglycosylase; 3D Domain Protein; Resuscitation-Promoting Factor Rpfa; Transglycosylase Domain Containing Protein; Vegetative Cell Wall; Cell Wall Catabolism Protein; FHA Domain-Containing Protein; Cell Wall Function Protein; Transglycosylase-Like Domain-Containing Protein; Resuscitation-Promoting Factor Rpfc; Lipoprotein; M24/M37 Family Peptidase

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRDDLYPAAGVQVHDADTIVLRR
SRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAASRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVA
GLLSAAGVPLLQSDHVVPAATAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV
AEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDESIWDAIAGCEAGGNWAINTGNGYYGGVQFDQGTWEANG
GLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAVRAGAR

Sequences:

>Translated_362_residues
MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRDDLYPAAGVQVHDADTIVLRR
SRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAASRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVA
GLLSAAGVPLLQSDHVVPAATAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV
AEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDESIWDAIAGCEAGGNWAINTGNGYYGGVQFDQGTWEANG
GLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAVRAGAR
>Mature_362_residues
MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRDDLYPAAGVQVHDADTIVLRR
SRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAASRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVA
GLLSAAGVPLLQSDHVVPAATAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV
AEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDESIWDAIAGCEAGGNWAINTGNGYYGGVQFDQGTWEANG
GLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAVRAGAR

Specific function: Unknown

COG id: COG3583

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38179; Mature: 38179

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51109 G5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD
CHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCCEEEEEEHHHHHHHHHHCCCCCCCCCC
DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA
CCCCCCCEEEECCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH
SRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA
HHHCCCCCCCCEEEEEEEEEEEECCCCEEEEEECCCCCHHHHHHHCCCCEECCCCCCCCC
TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV
CCHHHCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEE
AEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDESIWDAIAGCEAGGNWAIN
EEECCCCCCCCCEEEEEEECCHHEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEE
TGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAVRAG
CCCCEECCEEECCCCEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCC
AR
CC
>Mature Secondary Structure
MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD
CHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCCEEEEEEHHHHHHHHHHCCCCCCCCCC
DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA
CCCCCCCEEEECCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH
SRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA
HHHCCCCCCCCEEEEEEEEEEEECCCCEEEEEECCCCCHHHHHHHCCCCEECCCCCCCCC
TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV
CCHHHCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEE
AEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDESIWDAIAGCEAGGNWAIN
EEECCCCCCCCCEEEEEEECCHHEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEE
TGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAVRAG
CCCCEECCEEECCCCEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCC
AR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA