| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is 121636914
Identifier: 121636914
GI number: 121636914
Start: 1133031
End: 1135598
Strand: Direct
Name: 121636914
Synonym: BCG_1042
Alternate gene names: NA
Gene position: 1133031-1135598 (Clockwise)
Preceding gene: 121636913
Following gene: 121636915
Centisome position: 25.9
GC content: 54.17
Gene sequence:
>2568_bases ATGAATGACCAAGCTCCCGTTGCTTATGCACCACTATGGCGCACGGCGTGGCGTCGGCTGCGTCAGCGGCCGTTTCAATA TATTCTGCTGGTCCTGGGAATTGCGCTAGGCGTTGCCATGATCGTGGCTATCGATGTATCCAGTAATTCGGCGCAACGTG CCTTCGATCTCTCTGCCGCGGCCATCACCGGAAAATCTACTCACCGGCTGGTCAGTGGCCCCGCCGGGGTGGACCAACAG CTTTATGTCGATCTGCGCCGACACGGGTACGATTTTTCCGCTCCGGTAATCGAAGGCTATGTGTTGGCCCGCGGACTGGG AAACCGAGCTATGCAGTTCATGGGCACCGACCCATTTGCGGAGTCAGCTTTTCGCTCGCCTTTATGGTCCAACCAAAATA TCGCCGAGTTGGGTGGCTTTTTGACTCGACCCAACGGTGTCGTGTTAAGCCGACAAGTGGCACAGAAGTATGGCTTGGCT GTGGGCGATCGCATTGCTCTGCAAGTGAAAGGTGCGCCTACCACAGTAACCCTGGTGGGATTGCTGACACCTGCAGATGA AGTTAGCAATCAAAAATTGTCCGACCTTATCATTGCTGATATTTCCACGGCCCAAGAGTTGTTCCATATGCCCGGAAGAC TGAGCCACATCGATTTGATCATCAAAGATGAGGCCACTGCAACACGCATCCAACAAAGACTGCCGGCCGGTGTGCGTATG GAAACGTCGGATACCCAACGGGACACCGTCAAACAGATGACGGACGCTTTTACGGTCAATTTAACCGCTCTCAGTTTGAT TGCCTTGTTGGTGGGTATCTTTTTAATCTACAATACCGTGACATTTAATGTCGTGCAACGGCGACCGTTTTTCGCCATAT TGCGCTGTTTGGGTGTAACCCGAGAGCAGTTATTTTGGCTGATAATGACGGAATCCCTCGTTGCCGGGCTGATTGGTACG GGCTTGGGCCTCTTGATTGGAATTTGGCTCGGCGAAGGCTTGATCGGCCTGGTGACTCAAACCATCAATGATTTCTATTT TGTCATCAATGTTCGCAATGTGTCCGTCTCCGCCGAAAGCTTGTTGAAGGGGCTGATCATCGGCATCTTTGCCGCCATGT TAGCCACACTGCCACCGGCTATAGAAGCGATGCGCACCGTCCCTGCCAGCACATTGCGGCGCTCCTCCCTGGAAAGCAAG ATAACCAAGCTCATGCCGTGGTTGTGGGTGGCGTGGTTTGGTTTGGGTAGCTTTGGTGTATTGATGCTGTGGTTGCCGGG CAACAACCTGGTTGTGGCCTTTGTCGGTCTCTTTAGTGTGCTGATTGCCCTGGCGCTTATTGCCCCGCCGCTGACCCGGT TTGTAATGTTGCGCTTAGCTCCTGGCTTAGGACGGCTGCTCGGTCCAATAGGTCGAATGGCGCCACGCAATATTGTGCGC TCGTTGAGTCGCACCTCTATCGCCATCGCCGCCCTGATGATGGCCGTGTCCTTGATGGTAGGCGTCTCCATATCGGTGGG GTCGTTTCGACAGACGCTGGCCAATTGGCTAGAGGTGACTTTGAAGTCGGATGTCTATGTGTCTCCGCCGACCTTAACAT CCGGTCGCCCCAGCGGTAATCTGCCTGTGGATGCCGTCCGGAATATAAGCAAATGGCCAGGAGTGCGTGACGCAGTTATG GCTCGGTATAGTTCCGTTTTTGCCCCGGACTGGGGGCGTGAGGTGGAACTAATGGCGGTGTCGGGTGATATTTCCGACGG CAAGCGACCATATAGGTGGATCGACGGCAATAAAGACACGCTCTGGCCACGTTTCTTGGCGGGGAAAGGGGTGATGCTAT CGGAGCCAATGGTATCGCGACAACACTTGCAGATGCCGCCAAGGCCGATCACGCTAATGACGGATTCGGGGCCACAAACG TTCCCCGTTCTGGCGGTTTTCTCTGACTACACCTCAGATCAAGGTGTGATTTTGATGGATCGCGCCAGTTATCGGGCCCA TTGGCAGGATGATGACGTGACGACCATGTTTCTTTTTTTGGCATCGGGTGCGAATAGCGGTGCCTTGATAGATCAACTAC AAGCCGCGTTCGCGGGTCGGGAAGACATTGTTATTCAATCGACTCATAGTGTCCGCGAAGCATCAATGGTCATATTTGAT CGTAGTTTTACCATTACCATCGCGTTGCAACTGGTGGCCACGGTGGTGGCTTTTATTGGCGTACTGAGCGCGCTGATGAG TTTGGAATTGGACCGGGCTCATGAGTTGGGTGTTTTTCGCGCCATTGGCATGACTACCCGCCAATTATGGAAGCTGATGT TCATTGAGACCGGCCTAATGGGCGGGATGGCCGGCTTGATGGCCTTGCCAACTGGTTGTATTCTAGCGTGGATTCTTGTC CGCATTATCAATGTCCGCTCATTCGGCTGGACCTTGCAGATGCACTTTGAGTCGGCGCATTTTCTTCGAGCCCTGTTGGT AGCGGTGGTGGCCGCCCTGGCGGCGGGTATGTACCCCGCTTGGCGTTTGGGGCGGATGACGATTCGCACGGCGATTCGTG AGGAATGA
Upstream 100 bases:
>100_bases GACCGGGTAGTCAACTTACAGGGCGGCAGGTTGATACCTGCCTTGAACCGAGAAAATCAAACCGACCAGCCGGCCAGCAC GATCCTATTGCCCACGTCAT
Downstream 100 bases:
>100_bases CGGTACATGAGAAAAGCAGGATTGACCGGTGTTGTACTGGTTCTGACGCTGACGCTGGTGGCTTTCTGGTGGTGGCAACG TCCGCGAACGAATGCTGTGG
Product: putative adhesion component transport transmembrane protein ABC transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 855; Mature: 855
Protein sequence:
>855_residues MNDQAPVAYAPLWRTAWRRLRQRPFQYILLVLGIALGVAMIVAIDVSSNSAQRAFDLSAAAITGKSTHRLVSGPAGVDQQ LYVDLRRHGYDFSAPVIEGYVLARGLGNRAMQFMGTDPFAESAFRSPLWSNQNIAELGGFLTRPNGVVLSRQVAQKYGLA VGDRIALQVKGAPTTVTLVGLLTPADEVSNQKLSDLIIADISTAQELFHMPGRLSHIDLIIKDEATATRIQQRLPAGVRM ETSDTQRDTVKQMTDAFTVNLTALSLIALLVGIFLIYNTVTFNVVQRRPFFAILRCLGVTREQLFWLIMTESLVAGLIGT GLGLLIGIWLGEGLIGLVTQTINDFYFVINVRNVSVSAESLLKGLIIGIFAAMLATLPPAIEAMRTVPASTLRRSSLESK ITKLMPWLWVAWFGLGSFGVLMLWLPGNNLVVAFVGLFSVLIALALIAPPLTRFVMLRLAPGLGRLLGPIGRMAPRNIVR SLSRTSIAIAALMMAVSLMVGVSISVGSFRQTLANWLEVTLKSDVYVSPPTLTSGRPSGNLPVDAVRNISKWPGVRDAVM ARYSSVFAPDWGREVELMAVSGDISDGKRPYRWIDGNKDTLWPRFLAGKGVMLSEPMVSRQHLQMPPRPITLMTDSGPQT FPVLAVFSDYTSDQGVILMDRASYRAHWQDDDVTTMFLFLASGANSGALIDQLQAAFAGREDIVIQSTHSVREASMVIFD RSFTITIALQLVATVVAFIGVLSALMSLELDRAHELGVFRAIGMTTRQLWKLMFIETGLMGGMAGLMALPTGCILAWILV RIINVRSFGWTLQMHFESAHFLRALLVAVVAALAAGMYPAWRLGRMTIRTAIREE
Sequences:
>Translated_855_residues MNDQAPVAYAPLWRTAWRRLRQRPFQYILLVLGIALGVAMIVAIDVSSNSAQRAFDLSAAAITGKSTHRLVSGPAGVDQQ LYVDLRRHGYDFSAPVIEGYVLARGLGNRAMQFMGTDPFAESAFRSPLWSNQNIAELGGFLTRPNGVVLSRQVAQKYGLA VGDRIALQVKGAPTTVTLVGLLTPADEVSNQKLSDLIIADISTAQELFHMPGRLSHIDLIIKDEATATRIQQRLPAGVRM ETSDTQRDTVKQMTDAFTVNLTALSLIALLVGIFLIYNTVTFNVVQRRPFFAILRCLGVTREQLFWLIMTESLVAGLIGT GLGLLIGIWLGEGLIGLVTQTINDFYFVINVRNVSVSAESLLKGLIIGIFAAMLATLPPAIEAMRTVPASTLRRSSLESK ITKLMPWLWVAWFGLGSFGVLMLWLPGNNLVVAFVGLFSVLIALALIAPPLTRFVMLRLAPGLGRLLGPIGRMAPRNIVR SLSRTSIAIAALMMAVSLMVGVSISVGSFRQTLANWLEVTLKSDVYVSPPTLTSGRPSGNLPVDAVRNISKWPGVRDAVM ARYSSVFAPDWGREVELMAVSGDISDGKRPYRWIDGNKDTLWPRFLAGKGVMLSEPMVSRQHLQMPPRPITLMTDSGPQT FPVLAVFSDYTSDQGVILMDRASYRAHWQDDDVTTMFLFLASGANSGALIDQLQAAFAGREDIVIQSTHSVREASMVIFD RSFTITIALQLVATVVAFIGVLSALMSLELDRAHELGVFRAIGMTTRQLWKLMFIETGLMGGMAGLMALPTGCILAWILV RIINVRSFGWTLQMHFESAHFLRALLVAVVAALAAGMYPAWRLGRMTIRTAIREE >Mature_855_residues MNDQAPVAYAPLWRTAWRRLRQRPFQYILLVLGIALGVAMIVAIDVSSNSAQRAFDLSAAAITGKSTHRLVSGPAGVDQQ LYVDLRRHGYDFSAPVIEGYVLARGLGNRAMQFMGTDPFAESAFRSPLWSNQNIAELGGFLTRPNGVVLSRQVAQKYGLA VGDRIALQVKGAPTTVTLVGLLTPADEVSNQKLSDLIIADISTAQELFHMPGRLSHIDLIIKDEATATRIQQRLPAGVRM ETSDTQRDTVKQMTDAFTVNLTALSLIALLVGIFLIYNTVTFNVVQRRPFFAILRCLGVTREQLFWLIMTESLVAGLIGT GLGLLIGIWLGEGLIGLVTQTINDFYFVINVRNVSVSAESLLKGLIIGIFAAMLATLPPAIEAMRTVPASTLRRSSLESK ITKLMPWLWVAWFGLGSFGVLMLWLPGNNLVVAFVGLFSVLIALALIAPPLTRFVMLRLAPGLGRLLGPIGRMAPRNIVR SLSRTSIAIAALMMAVSLMVGVSISVGSFRQTLANWLEVTLKSDVYVSPPTLTSGRPSGNLPVDAVRNISKWPGVRDAVM ARYSSVFAPDWGREVELMAVSGDISDGKRPYRWIDGNKDTLWPRFLAGKGVMLSEPMVSRQHLQMPPRPITLMTDSGPQT FPVLAVFSDYTSDQGVILMDRASYRAHWQDDDVTTMFLFLASGANSGALIDQLQAAFAGREDIVIQSTHSVREASMVIFD RSFTITIALQLVATVVAFIGVLSALMSLELDRAHELGVFRAIGMTTRQLWKLMFIETGLMGGMAGLMALPTGCILAWILV RIINVRSFGWTLQMHFESAHFLRALLVAVVAALAAGMYPAWRLGRMTIRTAIREE
Specific function: Unknown
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-4 integral membrane protein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003838 [H]
Pfam domain/function: PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 93559; Mature: 93559
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDQAPVAYAPLWRTAWRRLRQRPFQYILLVLGIALGVAMIVAIDVSSNSAQRAFDLSAA CCCCCCEEEHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHCCHHH AITGKSTHRLVSGPAGVDQQLYVDLRRHGYDFSAPVIEGYVLARGLGNRAMQFMGTDPFA EECCCCCHHEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCHHH ESAFRSPLWSNQNIAELGGFLTRPNGVVLSRQVAQKYGLAVGDRIALQVKGAPTTVTLVG HHHHCCCCCCCCCHHHHCCCCCCCCCEEEHHHHHHHHCCCCCCEEEEEECCCCCEEEEEE LLTPADEVSNQKLSDLIIADISTAQELFHMPGRLSHIDLIIKDEATATRIQQRLPAGVRM EECCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHCCCCCEE ETSDTQRDTVKQMTDAFTVNLTALSLIALLVGIFLIYNTVTFNVVQRRPFFAILRCLGVT CCCCCHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC REQLFWLIMTESLVAGLIGTGLGLLIGIWLGEGLIGLVTQTINDFYFVINVRNVSVSAES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEEEEEEEECCCCHHH LLKGLIIGIFAAMLATLPPAIEAMRTVPASTLRRSSLESKITKLMPWLWVAWFGLGSFGV HHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE LMLWLPGNNLVVAFVGLFSVLIALALIAPPLTRFVMLRLAPGLGRLLGPIGRMAPRNIVR EEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHH SLSRTSIAIAALMMAVSLMVGVSISVGSFRQTLANWLEVTLKSDVYVSPPTLTSGRPSGN HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCC LPVDAVRNISKWPGVRDAVMARYSSVFAPDWGREVELMAVSGDISDGKRPYRWIDGNKDT CCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCEEECCCCCC LWPRFLAGKGVMLSEPMVSRQHLQMPPRPITLMTDSGPQTFPVLAVFSDYTSDQGVILMD CCHHHHCCCCCEECCCHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCEEEEE RASYRAHWQDDDVTTMFLFLASGANSGALIDQLQAAFAGREDIVIQSTHSVREASMVIFD CCCCCCCCCCCCHHEEHHHHHCCCCCCHHHHHHHHHHCCCCCEEEECCCCHHHHEEEEEE RSFTITIALQLVATVVAFIGVLSALMSLELDRAHELGVFRAIGMTTRQLWKLMFIETGLM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGMAGLMALPTGCILAWILVRIINVRSFGWTLQMHFESAHFLRALLVAVVAALAAGMYPA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCH WRLGRMTIRTAIREE HHHHHHHHHHHHCCC >Mature Secondary Structure MNDQAPVAYAPLWRTAWRRLRQRPFQYILLVLGIALGVAMIVAIDVSSNSAQRAFDLSAA CCCCCCEEEHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHCCHHH AITGKSTHRLVSGPAGVDQQLYVDLRRHGYDFSAPVIEGYVLARGLGNRAMQFMGTDPFA EECCCCCHHEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCHHH ESAFRSPLWSNQNIAELGGFLTRPNGVVLSRQVAQKYGLAVGDRIALQVKGAPTTVTLVG HHHHCCCCCCCCCHHHHCCCCCCCCCEEEHHHHHHHHCCCCCCEEEEEECCCCCEEEEEE LLTPADEVSNQKLSDLIIADISTAQELFHMPGRLSHIDLIIKDEATATRIQQRLPAGVRM EECCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHCCCCCEE ETSDTQRDTVKQMTDAFTVNLTALSLIALLVGIFLIYNTVTFNVVQRRPFFAILRCLGVT CCCCCHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC REQLFWLIMTESLVAGLIGTGLGLLIGIWLGEGLIGLVTQTINDFYFVINVRNVSVSAES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEEEEEEEECCCCHHH LLKGLIIGIFAAMLATLPPAIEAMRTVPASTLRRSSLESKITKLMPWLWVAWFGLGSFGV HHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE LMLWLPGNNLVVAFVGLFSVLIALALIAPPLTRFVMLRLAPGLGRLLGPIGRMAPRNIVR EEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHH SLSRTSIAIAALMMAVSLMVGVSISVGSFRQTLANWLEVTLKSDVYVSPPTLTSGRPSGN HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCC LPVDAVRNISKWPGVRDAVMARYSSVFAPDWGREVELMAVSGDISDGKRPYRWIDGNKDT CCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCEEECCCCCC LWPRFLAGKGVMLSEPMVSRQHLQMPPRPITLMTDSGPQTFPVLAVFSDYTSDQGVILMD CCHHHHCCCCCEECCCHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCEEEEE RASYRAHWQDDDVTTMFLFLASGANSGALIDQLQAAFAGREDIVIQSTHSVREASMVIFD CCCCCCCCCCCCHHEEHHHHHCCCCCCHHHHHHHHHHCCCCCEEEECCCCHHHHEEEEEE RSFTITIALQLVATVVAFIGVLSALMSLELDRAHELGVFRAIGMTTRQLWKLMFIETGLM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGMAGLMALPTGCILAWILVRIINVRSFGWTLQMHFESAHFLRALLVAVVAALAAGMYPA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCH WRLGRMTIRTAIREE HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]