| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121636889
Identifier: 121636889
GI number: 121636889
Start: 1105774
End: 1106574
Strand: Reverse
Name: 121636889
Synonym: BCG_1017c
Alternate gene names: NA
Gene position: 1106574-1105774 (Counterclockwise)
Preceding gene: 121636890
Following gene: 121636888
Centisome position: 25.3
GC content: 63.05
Gene sequence:
>801_bases GTGCTGCAACGAGAACTCACCCGGCTGCAGAACGGCTGGTTGAGCAGAGATGGAGTCTGGCACACCGACACCGACAAGCT GGCGGATCTGCGAGCGTTGCGGGATACTCTGGCAGCCCATCCCGGCACCAGCCTCATTCTGTTGGACACCGCCAGTGACC CGCGAAAGGTGTTGGCGGCTGTGGGAGTTGGCGACGTCGACAACGCCGAACGCGTCGGCGTCACGATGGGCGGCCTGAAC ACGCGGGTGAGTTCGAGCGTTGGGGACATGGTCAAGGAAGCTGGAATTCAGCGCGCAAAGGCAGCCGAACTGAGGGAACG AGCCGGATGGCCAAATTACGATGCGGTGGCATCCATTGCGTGGCTGGGCTATGACGCGCCGGACGGCCTCAAAGACGTGA TGCACGACTGGTCGGCTCGCGATGCCGCGGGGCCGTTGAACCGCTTCGACAAAGGCTTGGCCGCTACCACGAATGTCAGC GATCAGCACATCACCGCGTTCGGGCATTCCTACGGATCCCTGGTAACCAGTCTGGCGCTGCAGCAGGGGGCACCGGTCAG CGACGTCGTTTTGTACGGTTCACCGGGCACCGAGCTCACGCACGCGTCGCAGCTGGGCGTTGAGCCAGGGCATGCCTTCT ACATGATCGGCGTCAACGACCATGTCGCCAATACCATCCCCGAATTCGGCGCATTCGGCTCCGCACCCCAGGACGTACCC GGCATGACACAACTGTCGGTCAACACCGGTTTGGCGCCCGGCCCGCTCTTGAGCGACGGCCAACTTCACGAGCGAGCATA A
Upstream 100 bases:
>100_bases GACCCCGGGCCAGCAGGATCGGGTCAAGCAATGGTTCCCCAATACCCTGCGTAATCGCGACGGCATTCCCATCGCCGTTC GCAACGAACTGAATCTTTCA
Downstream 100 bases:
>100_bases GGACACTCTGAGTACGCGCGTAACGGAGACAATGATCAGCTTCGGATGAGTGGTTACAACTTGGCCGCCGTGCTGGCGGG ATTGCCCGACGACCTCATCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MLQRELTRLQNGWLSRDGVWHTDTDKLADLRALRDTLAAHPGTSLILLDTASDPRKVLAAVGVGDVDNAERVGVTMGGLN TRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIAWLGYDAPDGLKDVMHDWSARDAAGPLNRFDKGLAATTNVS DQHITAFGHSYGSLVTSLALQQGAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFGAFGSAPQDVP GMTQLSVNTGLAPGPLLSDGQLHERA
Sequences:
>Translated_266_residues MLQRELTRLQNGWLSRDGVWHTDTDKLADLRALRDTLAAHPGTSLILLDTASDPRKVLAAVGVGDVDNAERVGVTMGGLN TRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIAWLGYDAPDGLKDVMHDWSARDAAGPLNRFDKGLAATTNVS DQHITAFGHSYGSLVTSLALQQGAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFGAFGSAPQDVP GMTQLSVNTGLAPGPLLSDGQLHERA >Mature_266_residues MLQRELTRLQNGWLSRDGVWHTDTDKLADLRALRDTLAAHPGTSLILLDTASDPRKVLAAVGVGDVDNAERVGVTMGGLN TRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIAWLGYDAPDGLKDVMHDWSARDAAGPLNRFDKGLAATTNVS DQHITAFGHSYGSLVTSLALQQGAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFGAFGSAPQDVP GMTQLSVNTGLAPGPLLSDGQLHERA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010427 [H]
Pfam domain/function: PF06259 DUF1023 [H]
EC number: NA
Molecular weight: Translated: 28100; Mature: 28100
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQRELTRLQNGWLSRDGVWHTDTDKLADLRALRDTLAAHPGTSLILLDTASDPRKVLAA CCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHH VGVGDVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIA HCCCCCCCCHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH WLGYDAPDGLKDVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLAL HHCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHH QQGAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFGAFGSAPQDVP HCCCCCCCEEEECCCCCCHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCC GMTQLSVNTGLAPGPLLSDGQLHERA CCEEEEECCCCCCCCCCCCCCHHCCC >Mature Secondary Structure MLQRELTRLQNGWLSRDGVWHTDTDKLADLRALRDTLAAHPGTSLILLDTASDPRKVLAA CCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHH VGVGDVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIA HCCCCCCCCHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH WLGYDAPDGLKDVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLAL HHCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHH QQGAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFGAFGSAPQDVP HCCCCCCCEEEECCCCCCHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCC GMTQLSVNTGLAPGPLLSDGQLHERA CCEEEEECCCCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]