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The map label for this gene is 121636886

Identifier: 121636886

GI number: 121636886

Start: 1104022

End: 1104405

Strand: Direct

Name: 121636886

Synonym: BCG_1014

Alternate gene names: NA

Gene position: 1104022-1104405 (Clockwise)

Preceding gene: 121636885

Following gene: 121636887

Centisome position: 25.24

GC content: 66.15

Gene sequence:

>384_bases
ATGATCGTCGTTGACGCCTCGGCCGCGCTGGCCGCGCTGCTCAACGATGGACAAGCTCGACAATTGATCGCTGCCGAGCG
CCTGCATGTCCCGCATCTGGTCGATTCGGAAATCGCGAGCGGGCTCCGCAGGCTAGCGCAGCGGGATCGGCTGGGCGCGG
CCGACGGACGGCGGGCCCTCCAAACGTGGCGCCGCCTCGCGGTGACGCGTTATCCGGTGGTGGGCCTTTTCGAGCGTATC
TGGGAAATCCGCGCGAACCTGTCGGCATACGACGCCAGCTATGTGGCCTTGGCGGAAGCCCTGAACTGTGCGCTCGTCAC
AGCGGATCTGCGGCTCAGCGACACCGGCCAAGCCCAGTGTCCGATTACCGTTGTGCCCAGGTAG

Upstream 100 bases:

>100_bases
CTCGCCGCGCCGACAATCCGGCGCTTCTTGGGGACTTGCCCGATATCGGCATCGACACGACCGAACTGATCGGTGGTATC
GACGCCGAGCGCGCCGGTCG

Downstream 100 bases:

>100_bases
CCGTGGCACGGATGTTCGAGGATCCGTATATCACAACGCGATAGGTCCTGTTGACACAAGGGAAGCGCGGGGCGCCGTCG
GCGGTTCGTCTCGTCGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MIVVDASAALAALLNDGQARQLIAAERLHVPHLVDSEIASGLRRLAQRDRLGAADGRRALQTWRRLAVTRYPVVGLFERI
WEIRANLSAYDASYVALAEALNCALVTADLRLSDTGQAQCPITVVPR

Sequences:

>Translated_127_residues
MIVVDASAALAALLNDGQARQLIAAERLHVPHLVDSEIASGLRRLAQRDRLGAADGRRALQTWRRLAVTRYPVVGLFERI
WEIRANLSAYDASYVALAEALNCALVTADLRLSDTGQAQCPITVVPR
>Mature_127_residues
MIVVDASAALAALLNDGQARQLIAAERLHVPHLVDSEIASGLRRLAQRDRLGAADGRRALQTWRRLAVTRYPVVGLFERI
WEIRANLSAYDASYVALAEALNCALVTADLRLSDTGQAQCPITVVPR

Specific function: Unknown

COG id: COG4113

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y960_MYCTU (P64773)

Other databases:

- EMBL:   BX842575
- EMBL:   AE000516
- PIR:   F70717
- RefSeq:   NP_215475.1
- RefSeq:   NP_335422.1
- ProteinModelPortal:   P64773
- SMR:   P64773
- EnsemblBacteria:   EBMYCT00000001596
- EnsemblBacteria:   EBMYCT00000070895
- GeneID:   885158
- GeneID:   926380
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT0988
- KEGG:   mtu:Rv0960
- TIGR:   MT0988
- TubercuList:   Rv0960
- GeneTree:   EBGT00050000018632
- HOGENOM:   HBG554502
- OMA:   DYEMISA
- ProtClustDB:   CLSK871878
- InterPro:   IPR002716

Pfam domain/function: PF01850 PIN

EC number: NA

Molecular weight: Translated: 13859; Mature: 13859

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVVDASAALAALLNDGQARQLIAAERLHVPHLVDSEIASGLRRLAQRDRLGAADGRRAL
CEEECCHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHH
QTWRRLAVTRYPVVGLFERIWEIRANLSAYDASYVALAEALNCALVTADLRLSDTGQAQC
HHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEECCEECCCCCCCC
PITVVPR
CEEECCC
>Mature Secondary Structure
MIVVDASAALAALLNDGQARQLIAAERLHVPHLVDSEIASGLRRLAQRDRLGAADGRRAL
CEEECCHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHH
QTWRRLAVTRYPVVGLFERIWEIRANLSAYDASYVALAEALNCALVTADLRLSDTGQAQC
HHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEECCEECCCCCCCC
PITVVPR
CEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036