| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121636843
Identifier: 121636843
GI number: 121636843
Start: 1055972
End: 1057291
Strand: Reverse
Name: 121636843
Synonym: BCG_0972c
Alternate gene names: NA
Gene position: 1057291-1055972 (Counterclockwise)
Preceding gene: 121636846
Following gene: 121636839
Centisome position: 24.17
GC content: 63.41
Gene sequence:
>1320_bases ATGGATGCTGCTCAGGTGATAGAGCCGGCTCACGCCGGCCAGGACGTGGATGAGGCGGCCGTTGCGGCCCGTGAGCTCTC CGGTGCCGAGCGGGCGCTGGTGGGTGATCTGGTACGCCAGGCACGCGCTGAGGGGGTCGCATTGACCGGCCCTGACGGGT TGCTCAAGGCGCTGACCAAGACGGTGCTCGAAGCCGCCCTGCAAGAGGAGATGACCGAACACCTCGGCTACGACAGGCAC GCCGCAGCCGGGCGTGGAAGTGGAAACTCACGCAACGGATCTCGTAACAAGAAGGTGATAACCGATGCGTGCGGACAGGT CGAGATTGCGGTGCCCCGTGACCGCAACGGCACCTTCGAGCCGGTGATCGTGGGCAAACGTAAGCGCCGGGTCACCGATG TGGACCGGGTGGTGTTGTCGCTGTACGCCAAAGGCCTGACCACCGGCGAGATCGCGGCTCACTTCGCCGACGTTTACGGG GTGTCGGTGTCCAAGGACACCATCTCGCGGATCACCGACCGGGTCATCGAGGAGATGCAGGCGTGGTGGTCCAGGCCGCT GGAGAAGGTCTACGCCGCGGTGTTCATCGACGCGATCATGGTCAAGATCCGCGACGGGCAGGTCCGCAACCGGCCGGTCT ACGCCGCGATCGGCGTCGACCTCGACGGCCACAAGGACATCCTGGGGATGTGGGCCGGCGAAGGCGACGGTGAGTCAGCC AAATTTTGGCTGGCAGTGCTCACCGAACTGCGCAATCGTGGGGTCAAAGACATCTTCTTCCTGGTCTGCGACGGCCTCAA AGGGTTGCCCGACAGCGTGTCCGCGGCGTTCCCGTTGGCCACGGTGCAGACCTGCATCATCCATCTGATCCGCAACACTT TCCGGTATGCCTCCCGCAAGTACTGGGACAAGATCAGCGTCGACCTCAAGCCGATCTACACCGCAGCCAGTGCCGCTGAG GCCAGGTTGCGCTACGAGGAGTTCGCCGAGAAATGGGGTAAGCCTTACCCGGCGATCACACGGCTGTGGGACAGCGCGTG GGAAGAGTTCATTCCGTTCCTGGACTATGATGTCGAAATACGGCGAGTCCCGTGTTCTACCAACGCAATTGAAAGTCTCA ATGCGCGCTACCGGCGGGCGGTGCGGGCACGTGGACACTTCCCGAACGAACAGTCAGCACTCAAGACGCTCTACCTGGTC ACCCGCTCCCTGGATCCCAAGGGCACCGGGCAAACCAAGTGGGCCGTACGCTGGAAGCCAGCGCTCAACGCCCTGGCGAT CACGTTCGCCGATCGCATGCCAGCCGCCGAAGAACGCTGA
Upstream 100 bases:
>100_bases GCCGCCGGAGGGGTCTATCGCTGATTCGGTGTAAGTGGTTCTGACCGCCCCCGGCGTGGGGCAGAAGGAATCACTGCTAT GACCAAACACACTCAAGGGC
Downstream 100 bases:
>100_bases CCGAAAGAAAAATCCCGAGAAACGCCACTTACACCGAATATCGGACAGTCCCGGCCGGCGCGGCGAACGGCTAGGTTTTA GTCAGGTATTCAAAGGCGTC
Product: putative transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 439; Mature: 439
Protein sequence:
>439_residues MDAAQVIEPAHAGQDVDEAAVAARELSGAERALVGDLVRQARAEGVALTGPDGLLKALTKTVLEAALQEEMTEHLGYDRH AAAGRGSGNSRNGSRNKKVITDACGQVEIAVPRDRNGTFEPVIVGKRKRRVTDVDRVVLSLYAKGLTTGEIAAHFADVYG VSVSKDTISRITDRVIEEMQAWWSRPLEKVYAAVFIDAIMVKIRDGQVRNRPVYAAIGVDLDGHKDILGMWAGEGDGESA KFWLAVLTELRNRGVKDIFFLVCDGLKGLPDSVSAAFPLATVQTCIIHLIRNTFRYASRKYWDKISVDLKPIYTAASAAE ARLRYEEFAEKWGKPYPAITRLWDSAWEEFIPFLDYDVEIRRVPCSTNAIESLNARYRRAVRARGHFPNEQSALKTLYLV TRSLDPKGTGQTKWAVRWKPALNALAITFADRMPAAEER
Sequences:
>Translated_439_residues MDAAQVIEPAHAGQDVDEAAVAARELSGAERALVGDLVRQARAEGVALTGPDGLLKALTKTVLEAALQEEMTEHLGYDRH AAAGRGSGNSRNGSRNKKVITDACGQVEIAVPRDRNGTFEPVIVGKRKRRVTDVDRVVLSLYAKGLTTGEIAAHFADVYG VSVSKDTISRITDRVIEEMQAWWSRPLEKVYAAVFIDAIMVKIRDGQVRNRPVYAAIGVDLDGHKDILGMWAGEGDGESA KFWLAVLTELRNRGVKDIFFLVCDGLKGLPDSVSAAFPLATVQTCIIHLIRNTFRYASRKYWDKISVDLKPIYTAASAAE ARLRYEEFAEKWGKPYPAITRLWDSAWEEFIPFLDYDVEIRRVPCSTNAIESLNARYRRAVRARGHFPNEQSALKTLYLV TRSLDPKGTGQTKWAVRWKPALNALAITFADRMPAAEER >Mature_439_residues MDAAQVIEPAHAGQDVDEAAVAARELSGAERALVGDLVRQARAEGVALTGPDGLLKALTKTVLEAALQEEMTEHLGYDRH AAAGRGSGNSRNGSRNKKVITDACGQVEIAVPRDRNGTFEPVIVGKRKRRVTDVDRVVLSLYAKGLTTGEIAAHFADVYG VSVSKDTISRITDRVIEEMQAWWSRPLEKVYAAVFIDAIMVKIRDGQVRNRPVYAAIGVDLDGHKDILGMWAGEGDGESA KFWLAVLTELRNRGVKDIFFLVCDGLKGLPDSVSAAFPLATVQTCIIHLIRNTFRYASRKYWDKISVDLKPIYTAASAAE ARLRYEEFAEKWGKPYPAITRLWDSAWEEFIPFLDYDVEIRRVPCSTNAIESLNARYRRAVRARGHFPNEQSALKTLYLV TRSLDPKGTGQTKWAVRWKPALNALAITFADRMPAAEER
Specific function: Required for the transposition of the insertion element [H]
COG id: COG3328
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase mutator family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001207 [H]
Pfam domain/function: PF00872 Transposase_mut [H]
EC number: NA
Molecular weight: Translated: 48686; Mature: 48686
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: PS01007 TRANSPOSASE_MUTATOR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAAQVIEPAHAGQDVDEAAVAARELSGAERALVGDLVRQARAEGVALTGPDGLLKALTK CCHHHHCCHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHH TVLEAALQEEMTEHLGYDRHAAAGRGSGNSRNGSRNKKVITDACGQVEIAVPRDRNGTFE HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEEECCCCCCCCC PVIVGKRKRRVTDVDRVVLSLYAKGLTTGEIAAHFADVYGVSVSKDTISRITDRVIEEMQ CEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH AWWSRPLEKVYAAVFIDAIMVKIRDGQVRNRPVYAAIGVDLDGHKDILGMWAGEGDGESA HHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEECCCCCCCHHHEEECCCCCCCCH KFWLAVLTELRNRGVKDIFFLVCDGLKGLPDSVSAAFPLATVQTCIIHLIRNTFRYASRK HHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YWDKISVDLKPIYTAASAAEARLRYEEFAEKWGKPYPAITRLWDSAWEEFIPFLDYDVEI HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEE RRVPCSTNAIESLNARYRRAVRARGHFPNEQSALKTLYLVTRSLDPKGTGQTKWAVRWKP EECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECC ALNALAITFADRMPAAEER CHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MDAAQVIEPAHAGQDVDEAAVAARELSGAERALVGDLVRQARAEGVALTGPDGLLKALTK CCHHHHCCHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHH TVLEAALQEEMTEHLGYDRHAAAGRGSGNSRNGSRNKKVITDACGQVEIAVPRDRNGTFE HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEEECCCCCCCCC PVIVGKRKRRVTDVDRVVLSLYAKGLTTGEIAAHFADVYGVSVSKDTISRITDRVIEEMQ CEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH AWWSRPLEKVYAAVFIDAIMVKIRDGQVRNRPVYAAIGVDLDGHKDILGMWAGEGDGESA HHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEECCCCCCCHHHEEECCCCCCCCH KFWLAVLTELRNRGVKDIFFLVCDGLKGLPDSVSAAFPLATVQTCIIHLIRNTFRYASRK HHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YWDKISVDLKPIYTAASAAEARLRYEEFAEKWGKPYPAITRLWDSAWEEFIPFLDYDVEI HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEE RRVPCSTNAIESLNARYRRAVRARGHFPNEQSALKTLYLVTRSLDPKGTGQTKWAVRWKP EECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECC ALNALAITFADRMPAAEER CHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1849509; 1327271; 11481430; 11481432 [H]