| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121636816
Identifier: 121636816
GI number: 121636816
Start: 1025775
End: 1026752
Strand: Reverse
Name: 121636816
Synonym: BCG_0945c
Alternate gene names: NA
Gene position: 1026752-1025775 (Counterclockwise)
Preceding gene: 121636820
Following gene: 121636814
Centisome position: 23.47
GC content: 60.63
Gene sequence:
>978_bases ATGCGGACCGAGGACGATAGCTGGGATGTCACCACGAGTGTTGGTTCGACAGGACTATTGGTAGCCGCCGCAAGAGCATT GGAGACGCAGAAGGCCGATCCGCTGGCCATCGATCCCTATGCCGAGGTTTTCTGCCGTGCCGCAGGTGGTGAATGGGCCG ACGTATTGGACGGCAAGCTGCCCGATCACTATCTGACAACCGGGGACTTCGGTGAGCATTTCGTCAACTTCCAAGGTGCC CGCACCAGGTATTTCGACGAGTATTTCTCCCGGGCAACGGCCGCCGGCATGAAGCAGGTGGTCATCTTGGCTGCAGGATT GGATTCCCGTGCATTCCGATTGCAATGGCCAATCGGGACAACAATCTTCGAGTTGGATCGACCTCAGGTCCTCGACTTCA AGAACGCGGTGCTCGCCGACTATCACATACGGCCGCGAGCCCAACGTCGGTCGGTTGCTGTCGATCTGCGCGATGAGTGG CAGATAGCCTTGTGTAACAACGGATTTGATGCCAACCGGCCGTCGGCTTGGATCGCCGAGGGCCTGCTGGTCTATCTCTC GGCCGAGGCCCAGCAGCGCCTGTTTATCGGCATCGACACCTTGGCTAGCCCCGGTAGCCACGTTGCTGTCGAGGAAGCAA CTCCACTGGACCCTTGCGAATTCGCAGCGAAGCTCGAACGAGAACGCGCCGCGAACGCCCAAGGCGACCCGCGCAGGTTC TTTCAAATGGTCTACAACGAGCGGTGGGCGCGGGCCACGGAATGGTTCGATGAGCGAGGCTGGCGCGCGACCGCTACTCC ATTGGCCGAGTATCTGCGCCGCGTCGGCCGAGCGGTGCCCGAAGCCGATACCGAAGCTGCGCCAATGGTCACCGCTATAA CCTTTGTCAGCGCCGTCAGAACGGGATTAGTGGCCGATCCCGCGCGAACGTCACCGTCCAGCACCTCGATAGGCTTCAAG CGCTTTGAGGCCGACTAG
Upstream 100 bases:
>100_bases GCGTAGAAGTACCAAGTCCACCGCGCAGATATGTGTGCACGGCCGACTGCGCTGGGATACCGACAGCGGTGGGCGGACTG GAGCAACTAGAGTTCGATGA
Downstream 100 bases:
>100_bases TTGCGCGCACCGCAGCATAGCGTCGCAGGTCGTATTCTTCGGGATGTAGGTTAGCGAGCATGGCGCGGTGTTTGGCCGGT GCAAATGGCCAAACCTCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MRTEDDSWDVTTSVGSTGLLVAAARALETQKADPLAIDPYAEVFCRAAGGEWADVLDGKLPDHYLTTGDFGEHFVNFQGA RTRYFDEYFSRATAAGMKQVVILAAGLDSRAFRLQWPIGTTIFELDRPQVLDFKNAVLADYHIRPRAQRRSVAVDLRDEW QIALCNNGFDANRPSAWIAEGLLVYLSAEAQQRLFIGIDTLASPGSHVAVEEATPLDPCEFAAKLERERAANAQGDPRRF FQMVYNERWARATEWFDERGWRATATPLAEYLRRVGRAVPEADTEAAPMVTAITFVSAVRTGLVADPARTSPSSTSIGFK RFEAD
Sequences:
>Translated_325_residues MRTEDDSWDVTTSVGSTGLLVAAARALETQKADPLAIDPYAEVFCRAAGGEWADVLDGKLPDHYLTTGDFGEHFVNFQGA RTRYFDEYFSRATAAGMKQVVILAAGLDSRAFRLQWPIGTTIFELDRPQVLDFKNAVLADYHIRPRAQRRSVAVDLRDEW QIALCNNGFDANRPSAWIAEGLLVYLSAEAQQRLFIGIDTLASPGSHVAVEEATPLDPCEFAAKLERERAANAQGDPRRF FQMVYNERWARATEWFDERGWRATATPLAEYLRRVGRAVPEADTEAAPMVTAITFVSAVRTGLVADPARTSPSSTSIGFK RFEAD >Mature_325_residues MRTEDDSWDVTTSVGSTGLLVAAARALETQKADPLAIDPYAEVFCRAAGGEWADVLDGKLPDHYLTTGDFGEHFVNFQGA RTRYFDEYFSRATAAGMKQVVILAAGLDSRAFRLQWPIGTTIFELDRPQVLDFKNAVLADYHIRPRAQRRSVAVDLRDEW QIALCNNGFDANRPSAWIAEGLLVYLSAEAQQRLFIGIDTLASPGSHVAVEEATPLDPCEFAAKLERERAANAQGDPRRF FQMVYNERWARATEWFDERGWRATATPLAEYLRRVGRAVPEADTEAAPMVTAITFVSAVRTGLVADPARTSPSSTSIGFK RFEAD
Specific function: Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0677 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y893_MYCTU (P64747)
Other databases:
- EMBL: BX842574 - EMBL: AE000516 - PIR: B70782 - RefSeq: NP_215408.1 - RefSeq: NP_335349.1 - ProteinModelPortal: P64747 - EnsemblBacteria: EBMYCT00000001720 - EnsemblBacteria: EBMYCT00000071808 - GeneID: 885477 - GeneID: 926231 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT0917 - KEGG: mtu:Rv0893c - TIGR: MT0917 - TubercuList: Rv0893c - GeneTree: EBGT00050000015698 - HOGENOM: HBG570783 - OMA: WIRAGES - ProtClustDB: CLSK790400 - InterPro: IPR011610 - InterPro: IPR007213 - TIGRFAMs: TIGR00027
Pfam domain/function: PF04072 LCM
EC number: NA
Molecular weight: Translated: 36074; Mature: 36074
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: BINDING 126-126
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTEDDSWDVTTSVGSTGLLVAAARALETQKADPLAIDPYAEVFCRAAGGEWADVLDGKL CCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEECHHHHHHHHHCCCCHHHHHCCCC PDHYLTTGDFGEHFVNFQGARTRYFDEYFSRATAAGMKQVVILAAGLDSRAFRLQWPIGT CCCEECCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCHHEEEEEEECCCCCEEEEECCCCC TIFELDRPQVLDFKNAVLADYHIRPRAQRRSVAVDLRDEWQIALCNNGFDANRPSAWIAE EEEECCCCCEECCCCCEEECCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCHHHHHC GLLVYLSAEAQQRLFIGIDTLASPGSHVAVEEATPLDPCEFAAKLERERAANAQGDPRRF CCCEEEECCCCCEEEEEEHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHH FQMVYNERWARATEWFDERGWRATATPLAEYLRRVGRAVPEADTEAAPMVTAITFVSAVR HHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH TGLVADPARTSPSSTSIGFKRFEAD HCCCCCCCCCCCCCCCCCCEEECCC >Mature Secondary Structure MRTEDDSWDVTTSVGSTGLLVAAARALETQKADPLAIDPYAEVFCRAAGGEWADVLDGKL CCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEECHHHHHHHHHCCCCHHHHHCCCC PDHYLTTGDFGEHFVNFQGARTRYFDEYFSRATAAGMKQVVILAAGLDSRAFRLQWPIGT CCCEECCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCHHEEEEEEECCCCCEEEEECCCCC TIFELDRPQVLDFKNAVLADYHIRPRAQRRSVAVDLRDEWQIALCNNGFDANRPSAWIAE EEEECCCCCEECCCCCEEECCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCHHHHHC GLLVYLSAEAQQRLFIGIDTLASPGSHVAVEEATPLDPCEFAAKLERERAANAQGDPRRF CCCEEEECCCCCEEEEEEHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHH FQMVYNERWARATEWFDERGWRATATPLAEYLRRVGRAVPEADTEAAPMVTAITFVSAVR HHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH TGLVADPARTSPSSTSIGFKRFEAD HCCCCCCCCCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036