| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is yfeX [H]
Identifier: 121636723
GI number: 121636723
Start: 922688
End: 923695
Strand: Reverse
Name: yfeX [H]
Synonym: BCG_0851c
Alternate gene names: 121636723
Gene position: 923695-922688 (Counterclockwise)
Preceding gene: 121636726
Following gene: 121636722
Centisome position: 21.12
GC content: 62.2
Gene sequence:
>1008_bases GTGGCTGTGCCTGCTGTCTCTCCGCAGCCGATTCTGGCGCCGTTGACTCCGGCCGCGATCTTCCTGGTCGCCACCATCGG CGCCGACGGCGAGGCGACGGTGCACGACGCACTGTCGAAGATCTCCGGCCTGGTGCGTGCGATCGGCTTCCGTGACCCGA CCAAACACTTGTCCGTGGTCGTCTCGATCGGGTCCGACGCCTGGGACCGCTTGTTCGCCGGACCTCGACCCACCGAGCTG CATCCGTTCGTCGAGCTGACCGGACCACGGCATACCGCCCCGGCAACTCCCGGCGATCTGTTGTTCCACATCCGGGCCGA GACCATGGACGTGTGCTTCGAGTTGGCTGGCCGCATTCTCAAGTCGATGGGCGATGCGGTGACCGTTGTCGACGAAGTGC ACGGCTTCCGGTTTTTCGACAACCGTGATCTGCTGGGCTTTGTCGATGGCACCGAAAACCCAAGTGGCCCAATCGCCATC AAGGCCACCACGATCGGTGACGAGGATCGAAATTTCGCCGGCTCGTGTTATGTGCACGTGCAGAAGTATGTGCACGATAT GGCCTCGTGGGAATCCCTCTCGGTCACCGAGCAGGAGCGTGTGATCGGCCGGACCAAGCTCGACGACATCGAACTCGACG ACAACGCGAAGCCAGCCAATTCACACGTAGCGCTCAACGTCATCACCGACGACGACGGCACCGAGCGCAAGATCGTGCGA CACAACATGCCGTTCGGCGAAGTCGGCAAGGGCGAGTACGGCACTTACTTCATCGGATATTCGCGCACGCCAACGGTGAC CGAGCAGATGCTGCGCAACATGTTTCTCGGCGATCCGGCAGGCAACACCGATCGAGTGCTTGACTTTTCCACCGCGGTGA CCGGCGGACTGTTCTTCTCACCCACCATCGACTTTCTCGACCATCCACCGCCCCTACCGCAGGCGGCGACGCCAACTCTG GCAGCCGGGTCGCTATCGATCGGCAGCTTGAAAGGAAGCCCCCGATGA
Upstream 100 bases:
>100_bases AACGGCGACGGGGACGCGTCGATGAATTCGCACAGGCCGTGTGCCGTGGCCGCCATGTAGCCATGTCTAGCATCACCGGT ATTGCAGGGACGTTAGGGTC
Downstream 100 bases:
>100_bases ACAATCTCTACCGCGATTTGGCACCGGTCACCGAAGCCGCTTGGGCGGAAATCGAATTGGAGGCGGCGCGGACGTTCAAG CGACACATCGCCGGGCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MAVPAVSPQPILAPLTPAAIFLVATIGADGEATVHDALSKISGLVRAIGFRDPTKHLSVVVSIGSDAWDRLFAGPRPTEL HPFVELTGPRHTAPATPGDLLFHIRAETMDVCFELAGRILKSMGDAVTVVDEVHGFRFFDNRDLLGFVDGTENPSGPIAI KATTIGDEDRNFAGSCYVHVQKYVHDMASWESLSVTEQERVIGRTKLDDIELDDNAKPANSHVALNVITDDDGTERKIVR HNMPFGEVGKGEYGTYFIGYSRTPTVTEQMLRNMFLGDPAGNTDRVLDFSTAVTGGLFFSPTIDFLDHPPPLPQAATPTL AAGSLSIGSLKGSPR
Sequences:
>Translated_335_residues MAVPAVSPQPILAPLTPAAIFLVATIGADGEATVHDALSKISGLVRAIGFRDPTKHLSVVVSIGSDAWDRLFAGPRPTEL HPFVELTGPRHTAPATPGDLLFHIRAETMDVCFELAGRILKSMGDAVTVVDEVHGFRFFDNRDLLGFVDGTENPSGPIAI KATTIGDEDRNFAGSCYVHVQKYVHDMASWESLSVTEQERVIGRTKLDDIELDDNAKPANSHVALNVITDDDGTERKIVR HNMPFGEVGKGEYGTYFIGYSRTPTVTEQMLRNMFLGDPAGNTDRVLDFSTAVTGGLFFSPTIDFLDHPPPLPQAATPTL AAGSLSIGSLKGSPR >Mature_334_residues AVPAVSPQPILAPLTPAAIFLVATIGADGEATVHDALSKISGLVRAIGFRDPTKHLSVVVSIGSDAWDRLFAGPRPTELH PFVELTGPRHTAPATPGDLLFHIRAETMDVCFELAGRILKSMGDAVTVVDEVHGFRFFDNRDLLGFVDGTENPSGPIAIK ATTIGDEDRNFAGSCYVHVQKYVHDMASWESLSVTEQERVIGRTKLDDIELDDNAKPANSHVALNVITDDDGTERKIVRH NMPFGEVGKGEYGTYFIGYSRTPTVTEQMLRNMFLGDPAGNTDRVLDFSTAVTGGLFFSPTIDFLDHPPPLPQAATPTLA AGSLSIGSLKGSPR
Specific function: Unknown
COG id: COG2837
COG function: function code P; Predicted iron-dependent peroxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DyP-type peroxidase family [H]
Homologues:
Organism=Escherichia coli, GI87082102, Length=297, Percent_Identity=37.3737373737374, Blast_Score=172, Evalue=3e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011008 - InterPro: IPR006314 [H]
Pfam domain/function: PF04261 Dyp_perox [H]
EC number: NA
Molecular weight: Translated: 36048; Mature: 35917
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVPAVSPQPILAPLTPAAIFLVATIGADGEATVHDALSKISGLVRAIGFRDPTKHLSVV CCCCCCCCCCCCCCCCHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEE VSIGSDAWDRLFAGPRPTELHPFVELTGPRHTAPATPGDLLFHIRAETMDVCFELAGRIL EEECCCHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHH KSMGDAVTVVDEVHGFRFFDNRDLLGFVDGTENPSGPIAIKATTIGDEDRNFAGSCYVHV HHCCCCEEEHHHHCCEEEECCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCHHHHHH QKYVHDMASWESLSVTEQERVIGRTKLDDIELDDNAKPANSHVALNVITDDDGTERKIVR HHHHHHHHCCCCCCCCHHHHHHCCCCCCCEEECCCCCCCCCEEEEEEEECCCCCCCHHHC HNMPFGEVGKGEYGTYFIGYSRTPTVTEQMLRNMFLGDPAGNTDRVLDFSTAVTGGLFFS CCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEEHHHHCCCEEEC PTIDFLDHPPPLPQAATPTLAAGSLSIGSLKGSPR CCHHHCCCCCCCCCCCCCCEEECCEEEECCCCCCC >Mature Secondary Structure AVPAVSPQPILAPLTPAAIFLVATIGADGEATVHDALSKISGLVRAIGFRDPTKHLSVV CCCCCCCCCCCCCCCHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEE VSIGSDAWDRLFAGPRPTELHPFVELTGPRHTAPATPGDLLFHIRAETMDVCFELAGRIL EEECCCHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHH KSMGDAVTVVDEVHGFRFFDNRDLLGFVDGTENPSGPIAIKATTIGDEDRNFAGSCYVHV HHCCCCEEEHHHHCCEEEECCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCHHHHHH QKYVHDMASWESLSVTEQERVIGRTKLDDIELDDNAKPANSHVALNVITDDDGTERKIVR HHHHHHHHCCCCCCCCHHHHHHCCCCCCCEEECCCCCCCCCEEEEEEEECCCCCCCHHHC HNMPFGEVGKGEYGTYFIGYSRTPTVTEQMLRNMFLGDPAGNTDRVLDFSTAVTGGLFFS CCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEEHHHHCCCEEEC PTIDFLDHPPPLPQAATPTLAAGSLSIGSLKGSPR CCHHHCCCCCCCCCCCCCCEEECCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]