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The map label for this gene is yvoA [H]

Identifier: 121636717

GI number: 121636717

Start: 917619

End: 918428

Strand: Reverse

Name: yvoA [H]

Synonym: BCG_0845c

Alternate gene names: 121636717

Gene position: 918428-917619 (Counterclockwise)

Preceding gene: 121636719

Following gene: 121636716

Centisome position: 20.99

GC content: 64.2

Gene sequence:

>810_bases
ATGACATCTGTCAAGCTGGACCTGGACGCTGCCGATCTGCGGATATCGCGTGGCAGCGTGCCGGCGAGTACCCAGCTTGC
CGAGGCGCTAAAGGCCCAGATCATCCAGCAGCGGCTGCCGCGCGGCGGGCGCTTGCCCAGCGAACGAGAATTGATCGACC
GTTCCGGTTTGAGCCGCGTGACCGTGCGCGCGGCGGTCGGCATGCTGCAACGTCAGGGATGGCTAGTGCGCCGGCAAGGC
TTGGGTACCTTCGTCGCCGATCCGGTGGAACAGGAGCTCAGTTGCGGCGTGCGCACCATCACAGAGGTGTTGTTGAGCTG
TGGTGTTACCCCGCAGGTCGACGTGCTGTCACACCAGACCGGACCGGCGCCGCAACGGATTTCCGAGACGCTGGGTTTGG
TTGAGGTCCTCTGTATTCGCCGGCGCATCCGCACTGGCGATCAACCCTTGGCCCTGGTCACGGCCTATCTTCCGCCCGGC
GTGGGCCCAGCCGTCGAGCCGTTGCTATCGGGCAGCGCGGACACCGAAACCACATATGCGATGTGGGAGCGGCGACTGGG
TGTACGCATTGCACAGGCTACCCACGAAATCCATGCCGCCGGGGCCTCCCCCGACGTAGCCGACGCGTTGGGTCTGGCGG
TGGGTTCGCCGGTACTGGTCGTCGACCGCACCAGCTACACCAATGACGGCAAGCCCCTTGAAGTGGTCGTGTTCCACCAT
CGCCCCGAGCGGTACCAGTTCTCCGTCACGTTACCCCGAACGTTGCCCGGATCAGGTGCCGGAATTATCGAGAAACGAGA
TTTCGCATGA

Upstream 100 bases:

>100_bases
GGGCGATGACCGCGACGGGTGACGTCATGGCTGACCTTCTTCCGCTGCTACCGCGCACGCACGCTTGACGTGGTGAGTAT
AAGACGTTTTAATACGTCTT

Downstream 100 bases:

>100_bases
ACGCCAAAGACGACCCGCACTTCGGACTCATGTTGGCTGCGACGGTTAATGGCCTGGCGGTCGGCAGTTACCGCGAAATG
GTTGTCGTCTCGCAGACGGC

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MTSVKLDLDAADLRISRGSVPASTQLAEALKAQIIQQRLPRGGRLPSERELIDRSGLSRVTVRAAVGMLQRQGWLVRRQG
LGTFVADPVEQELSCGVRTITEVLLSCGVTPQVDVLSHQTGPAPQRISETLGLVEVLCIRRRIRTGDQPLALVTAYLPPG
VGPAVEPLLSGSADTETTYAMWERRLGVRIAQATHEIHAAGASPDVADALGLAVGSPVLVVDRTSYTNDGKPLEVVVFHH
RPERYQFSVTLPRTLPGSGAGIIEKRDFA

Sequences:

>Translated_269_residues
MTSVKLDLDAADLRISRGSVPASTQLAEALKAQIIQQRLPRGGRLPSERELIDRSGLSRVTVRAAVGMLQRQGWLVRRQG
LGTFVADPVEQELSCGVRTITEVLLSCGVTPQVDVLSHQTGPAPQRISETLGLVEVLCIRRRIRTGDQPLALVTAYLPPG
VGPAVEPLLSGSADTETTYAMWERRLGVRIAQATHEIHAAGASPDVADALGLAVGSPVLVVDRTSYTNDGKPLEVVVFHH
RPERYQFSVTLPRTLPGSGAGIIEKRDFA
>Mature_268_residues
TSVKLDLDAADLRISRGSVPASTQLAEALKAQIIQQRLPRGGRLPSERELIDRSGLSRVTVRAAVGMLQRQGWLVRRQGL
GTFVADPVEQELSCGVRTITEVLLSCGVTPQVDVLSHQTGPAPQRISETLGLVEVLCIRRRIRTGDQPLALVTAYLPPGV
GPAVEPLLSGSADTETTYAMWERRLGVRIAQATHEIHAAGASPDVADALGLAVGSPVLVVDRTSYTNDGKPLEVVVFHHR
PERYQFSVTLPRTLPGSGAGIIEKRDFA

Specific function: Acts as a weak repressor of yflG expression [H]

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082252, Length=217, Percent_Identity=25.3456221198157, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1790118, Length=234, Percent_Identity=26.0683760683761, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1790540, Length=238, Percent_Identity=27.7310924369748, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1788418, Length=232, Percent_Identity=21.551724137931, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR011663
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF07702 UTRA [H]

EC number: NA

Molecular weight: Translated: 28960; Mature: 28828

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSVKLDLDAADLRISRGSVPASTQLAEALKAQIIQQRLPRGGRLPSERELIDRSGLSRV
CCCEEEECCHHHEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHH
TVRAAVGMLQRQGWLVRRQGLGTFVADPVEQELSCGVRTITEVLLSCGVTPQVDVLSHQT
HHHHHHHHHHHCCCEEEECCCCCHHCCHHHHHHHCCHHHHHHHHHHCCCCCCHHHHCCCC
GPAPQRISETLGLVEVLCIRRRIRTGDQPLALVTAYLPPGVGPAVEPLLSGSADTETTYA
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCHHHHH
MWERRLGVRIAQATHEIHAAGASPDVADALGLAVGSPVLVVDRTSYTNDGKPLEVVVFHH
HHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEEC
RPERYQFSVTLPRTLPGSGAGIIEKRDFA
CCCCEEEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TSVKLDLDAADLRISRGSVPASTQLAEALKAQIIQQRLPRGGRLPSERELIDRSGLSRV
CCEEEECCHHHEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHH
TVRAAVGMLQRQGWLVRRQGLGTFVADPVEQELSCGVRTITEVLLSCGVTPQVDVLSHQT
HHHHHHHHHHHCCCEEEECCCCCHHCCHHHHHHHCCHHHHHHHHHHCCCCCCHHHHCCCC
GPAPQRISETLGLVEVLCIRRRIRTGDQPLALVTAYLPPGVGPAVEPLLSGSADTETTYA
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCHHHHH
MWERRLGVRIAQATHEIHAAGASPDVADALGLAVGSPVLVVDRTSYTNDGKPLEVVVFHH
HHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEEC
RPERYQFSVTLPRTLPGSGAGIIEKRDFA
CCCCEEEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]