Click here to switch to the map view.

The map label for this gene is ybjK [C]

Identifier: 121636699

GI number: 121636699

Start: 900188

End: 900811

Strand: Direct

Name: ybjK [C]

Synonym: BCG_0827

Alternate gene names: 121636699

Gene position: 900188-900811 (Clockwise)

Preceding gene: 121636696

Following gene: 121636701

Centisome position: 20.58

GC content: 68.27

Gene sequence:

>624_bases
ATGGGCGTGACAGCAGCGGTCACTCCAAAAGGAGAACGTCGGCGGTATGCGTTGGTCAGCGCCGCCGCGGAGCTGCTCGG
CGAGGGCGGGTTCGAGGCGGTACGCCACCGGGCGGTGGCGCGGCGGGCCGGTTTGCCGTTGGCGTCTACCACCTACTACT
TCTCGTCGCTCGACGATTTGATCGCTCGCGCGGTCGAACACATCGGAATGATCGAGGTGGCTCAGCTGCGAGCCCGGGTC
AGTGCGCTGTCCCGGCGACGTCGGGGGCCCGAGACCACCGCCGTTGTGCTGGTTGACCTGCTGGTGGGGGAAATGTCCAG
TCCGGGGCTTGCCGAGCAGCTGATCTCACGATACGAGCGCCATATCGCCTGTACCCGCCTGCCTGACCTGCGCGAAAGCA
TGCGCCGCAGCCTGCGTCAGCGCGCTGAGGCCGTGGCCGAGGCCATCGAGCGCTCCGGCCGCTCCGCACAGATCGAACTG
GTGTGTACGTTGATCTGTGCGGTCGACGGATCGGTGGTCTCGGCGCTGGTCGAAGGGCGGGACCCGCGTGCCGCTGCGCT
GGCGACGGTGGTCGACCTCATCGACGTGCTCGCGCCCGTCGACCAGCGTCCGGTGCCGTTCTGA

Upstream 100 bases:

>100_bases
ACCGAGCACGGCGCGGCGGCTCAACTCTGGCATGCGGGCCATCATGCCATGGACGTTTGGCCGAATTGGCAATGCAGTAC
CACTTTGACTGGCAGCATGG

Downstream 100 bases:

>100_bases
AGTCGGTGGGCAGCGACGGCGTGACAATGTACCCGGTGGTGAAGTCCCCATAGATCGTGACATCGGCGGGCCGGCGTTGG
GCGTACAACGCCACGTAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; Tetr Family Transcriptional Regulator

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MGVTAAVTPKGERRRYALVSAAAELLGEGGFEAVRHRAVARRAGLPLASTTYYFSSLDDLIARAVEHIGMIEVAQLRARV
SALSRRRRGPETTAVVLVDLLVGEMSSPGLAEQLISRYERHIACTRLPDLRESMRRSLRQRAEAVAEAIERSGRSAQIEL
VCTLICAVDGSVVSALVEGRDPRAAALATVVDLIDVLAPVDQRPVPF

Sequences:

>Translated_207_residues
MGVTAAVTPKGERRRYALVSAAAELLGEGGFEAVRHRAVARRAGLPLASTTYYFSSLDDLIARAVEHIGMIEVAQLRARV
SALSRRRRGPETTAVVLVDLLVGEMSSPGLAEQLISRYERHIACTRLPDLRESMRRSLRQRAEAVAEAIERSGRSAQIEL
VCTLICAVDGSVVSALVEGRDPRAAALATVVDLIDVLAPVDQRPVPF
>Mature_206_residues
GVTAAVTPKGERRRYALVSAAAELLGEGGFEAVRHRAVARRAGLPLASTTYYFSSLDDLIARAVEHIGMIEVAQLRARVS
ALSRRRRGPETTAVVLVDLLVGEMSSPGLAEQLISRYERHIACTRLPDLRESMRRSLRQRAEAVAEAIERSGRSAQIELV
CTLICAVDGSVVSALVEGRDPRAAALATVVDLIDVLAPVDQRPVPF

Specific function: Unknown

COG id: COG3226

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22382; Mature: 22251

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVTAAVTPKGERRRYALVSAAAELLGEGGFEAVRHRAVARRAGLPLASTTYYFSSLDDL
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
IARAVEHIGMIEVAQLRARVSALSRRRRGPETTAVVLVDLLVGEMSSPGLAEQLISRYER
HHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
HIACTRLPDLRESMRRSLRQRAEAVAEAIERSGRSAQIELVCTLICAVDGSVVSALVEGR
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
DPRAAALATVVDLIDVLAPVDQRPVPF
CCHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
GVTAAVTPKGERRRYALVSAAAELLGEGGFEAVRHRAVARRAGLPLASTTYYFSSLDDL
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
IARAVEHIGMIEVAQLRARVSALSRRRRGPETTAVVLVDLLVGEMSSPGLAEQLISRYER
HHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
HIACTRLPDLRESMRRSLRQRAEAVAEAIERSGRSAQIELVCTLICAVDGSVVSALVEGR
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
DPRAAALATVVDLIDVLAPVDQRPVPF
CCHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA