| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is rpmC [H]
Identifier: 121636631
GI number: 121636631
Start: 836988
End: 837221
Strand: Direct
Name: rpmC [H]
Synonym: BCG_0759
Alternate gene names: 121636631
Gene position: 836988-837221 (Clockwise)
Preceding gene: 121636630
Following gene: 121636632
Centisome position: 19.13
GC content: 61.97
Gene sequence:
>234_bases ATGGCAGTGGGTGTCTCGCCGGGCGAACTGCGTGAGCTCACCGACGAGGAGCTGGCCGAGCGGTTGCGCGAGTCCAAGGA AGAGTTGTTCAACTTGCGTTTCCAGATGGCGACCGGCCAGCTCAACAATAACCGCCGGCTCCGTACGGTGCGTCAGGAAA TCGCGCGCATCTACACCGTGCTGCGCGAACGAGAACTGGGTCTGGCGACTGGGCCCGATGGTAAGGAATCGTGA
Upstream 100 bases:
>100_bases TCAGTTACCCCAATGAAGGTGTCGCCCGGGCCGCGCTCACCCGAGCGATCCACAAGCTGCCGATCAAGGCACGCATTATT ACTCGAGAGGAGCAGTTCTG
Downstream 100 bases:
>100_bases TGGCAGAGGCTAAGACCGGCGCGAAGGCGGCGCCTAGGGTGGCTAAGGCCGCCAAGGCGGCCCCCAAGAAGGCCGCACCC AACGACGCTGAGGCCATAGG
Product: 50S ribosomal protein L29
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTVLRERELGLATGPDGKES
Sequences:
>Translated_77_residues MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTVLRERELGLATGPDGKES >Mature_76_residues AVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTVLRERELGLATGPDGKES
Specific function: Unknown
COG id: COG0255
COG function: function code J; Ribosomal protein L29
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein L29P family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001854 - InterPro: IPR018254 [H]
Pfam domain/function: PF00831 Ribosomal_L29 [H]
EC number: NA
Molecular weight: Translated: 8859; Mature: 8728
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: PS00579 RIBOSOMAL_L29
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV CCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH LRERELGLATGPDGKES HHHHCCCCCCCCCCCCC >Mature Secondary Structure AVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV CCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH LRERELGLATGPDGKES HHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA